| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757197
Identifier: 170757197
GI number: 170757197
Start: 2927698
End: 2928339
Strand: Reverse
Name: 170757197
Synonym: CLD_1817
Alternate gene names: NA
Gene position: 2928339-2927698 (Counterclockwise)
Preceding gene: 170754538
Following gene: 170756717
Centisome position: 73.98
GC content: 26.32
Gene sequence:
>642_bases TTGGAAAAATTGGCAATATTTGATGTAGATTATACGCTTACAAAACAAGAAACACTTATACAGTTTTATAAATTTATGCT TAAAAAGAAACCTTCTCTTATATTTCATGCTCCTAAAATAGTTATATCTGGGCTTTTGTATGCTTTGAAAATATTTCAAG CAGGAAAAGCTAAAGAAATATTTATAGGATTTATAGATGGTATTACAGAGGATAAAATGCAAAGTTATGTAAAAGAATTT TATGATAAAAAACTAAGCAAAATATTATATAAAGATGCTATAGATACTATGAGAAAATTGAAAAATGAAGGCTATAAAGT ATACCTTATATCTGCTTCTGCAGAATTTTATTTAAAAGAGCTCTATAATATAAAAGAAGTAGATAAAGTAATAGGAACTA TATTTACACTAGAAGAAGGGGCCTACAAGAGAAAAATAATAGGAGAAAACTGTAAAGGAGAAGAAAAGGTAAGAAGGCTT ATGGAAGTCTTAAAAGAAGAAAATATAGAAGTAGATTTTAAGGAATCATATATGTTTTCAGATTCTCTAGCGGATTTACC TTTATTTAAATTAGTAGGGAAGCCTTATCTTATAAATGCAAAAAAGAAGTATAATAATATAGAAGTACTTAATTGGAAGT AG
Upstream 100 bases:
>100_bases AAGTGAAAAGTTTAGTATAAATAAAAAGGTGAATATATTATAAAAAATCACAAAATATATAGTATAATATAAGAATACAA CTTATAGAAGAGGTGGTATG
Downstream 100 bases:
>100_bases AATAAAATTTAATTCAAATTATGTTCACTGATTGTGGATTTTAATTGAAACTAATTTAAGTGTTTTATAATATTAATACA CAATATGAGGATTGTGATAT
Product: HAD family hydrolase
Products: NA
Alternate protein names: HAD-Superfamily Subfamily IB Hydrolase TIGR; HAD-Superfamily Subfamily IB Hydrolase; Phosphoserine Phosphatase; Hydrolase; HAD-Superfamily Hydrolase; Phosphoserine Phosphatase SerB; Phosphoserine Phosphatase Family Protein; Had-Superfamily Subfamily Ib Hydrolase; HAD-Superfamily Hydrolase Subfamily IB; Phosphoserine Phosphatase-Like Protein; HAD Hydrolase Family IB
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MEKLAIFDVDYTLTKQETLIQFYKFMLKKKPSLIFHAPKIVISGLLYALKIFQAGKAKEIFIGFIDGITEDKMQSYVKEF YDKKLSKILYKDAIDTMRKLKNEGYKVYLISASAEFYLKELYNIKEVDKVIGTIFTLEEGAYKRKIIGENCKGEEKVRRL MEVLKEENIEVDFKESYMFSDSLADLPLFKLVGKPYLINAKKKYNNIEVLNWK
Sequences:
>Translated_213_residues MEKLAIFDVDYTLTKQETLIQFYKFMLKKKPSLIFHAPKIVISGLLYALKIFQAGKAKEIFIGFIDGITEDKMQSYVKEF YDKKLSKILYKDAIDTMRKLKNEGYKVYLISASAEFYLKELYNIKEVDKVIGTIFTLEEGAYKRKIIGENCKGEEKVRRL MEVLKEENIEVDFKESYMFSDSLADLPLFKLVGKPYLINAKKKYNNIEVLNWK >Mature_213_residues MEKLAIFDVDYTLTKQETLIQFYKFMLKKKPSLIFHAPKIVISGLLYALKIFQAGKAKEIFIGFIDGITEDKMQSYVKEF YDKKLSKILYKDAIDTMRKLKNEGYKVYLISASAEFYLKELYNIKEVDKVIGTIFTLEEGAYKRKIIGENCKGEEKVRRL MEVLKEENIEVDFKESYMFSDSLADLPLFKLVGKPYLINAKKKYNNIEVLNWK
Specific function: Unknown
COG id: COG0560
COG function: function code E; Phosphoserine phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24988; Mature: 24988
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKLAIFDVDYTLTKQETLIQFYKFMLKKKPSLIFHAPKIVISGLLYALKIFQAGKAKEI CCCEEEEECCCEECHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHCCCCCEE FIGFIDGITEDKMQSYVKEFYDKKLSKILYKDAIDTMRKLKNEGYKVYLISASAEFYLKE EEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHH LYNIKEVDKVIGTIFTLEEGAYKRKIIGENCKGEEKVRRLMEVLKEENIEVDFKESYMFS HHCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEHHHEEEC DSLADLPLFKLVGKPYLINAKKKYNNIEVLNWK CCCCCCHHHHHHCCCEEEECHHCCCCEEEEECC >Mature Secondary Structure MEKLAIFDVDYTLTKQETLIQFYKFMLKKKPSLIFHAPKIVISGLLYALKIFQAGKAKEI CCCEEEEECCCEECHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHCCCCCEE FIGFIDGITEDKMQSYVKEFYDKKLSKILYKDAIDTMRKLKNEGYKVYLISASAEFYLKE EEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHH LYNIKEVDKVIGTIFTLEEGAYKRKIIGENCKGEEKVRRLMEVLKEENIEVDFKESYMFS HHCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEHHHEEEC DSLADLPLFKLVGKPYLINAKKKYNNIEVLNWK CCCCCCHHHHHHCCCEEEECHHCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA