Click here to switch to the map view.

The map label for this gene is 170757189

Identifier: 170757189

GI number: 170757189

Start: 2173624

End: 2173779

Strand: Reverse

Name: 170757189

Synonym: CLD_2600

Alternate gene names: NA

Gene position: 2173779-2173624 (Counterclockwise)

Preceding gene: 170755208

Following gene: 170755885

Centisome position: 54.92

GC content: 28.21

Gene sequence:

>156_bases
ATGAAGCAGGAAGAATTAGCAAAGTTAGTAGGAGTAAGAAGAGAAACTATAGGACATTTAGAAAATGAAAAATATAATCC
ATCATTAAAATTATCCATGGATATTGCTAAAGTTTTTGGAAAATCAGTAGAGGAAGTATTTCAATTTGTGGATTAA

Upstream 100 bases:

>100_bases
TAAAGAAGTAACTTATAAATTAATATCATTTCAAAGGATTACTTGCAAAATATATTTTAAATATTAAATATATTTTCTAA
TTTATAATATGTAACTAAAC

Downstream 100 bases:

>100_bases
GATGAAGTTTAAAAGCAAATAATAAGCTAAGGTACTAGAAATATTGAGTTAATGCCTTAGCTTATTTATTTTGTGTAAAT
AAATTCACTTATAATTCTGG

Product: DNA-binding protein

Products: NA

Alternate protein names: Transcriptional Regulator XRE Family; XRE Family Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein

Number of amino acids: Translated: 51; Mature: 51

Protein sequence:

>51_residues
MKQEELAKLVGVRRETIGHLENEKYNPSLKLSMDIAKVFGKSVEEVFQFVD

Sequences:

>Translated_51_residues
MKQEELAKLVGVRRETIGHLENEKYNPSLKLSMDIAKVFGKSVEEVFQFVD
>Mature_51_residues
MKQEELAKLVGVRRETIGHLENEKYNPSLKLSMDIAKVFGKSVEEVFQFVD

Specific function: Unknown

COG id: COG1476

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5882; Mature: 5882

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQEELAKLVGVRRETIGHLENEKYNPSLKLSMDIAKVFGKSVEEVFQFVD
CCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKQEELAKLVGVRRETIGHLENEKYNPSLKLSMDIAKVFGKSVEEVFQFVD
CCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA