| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757166
Identifier: 170757166
GI number: 170757166
Start: 3468658
End: 3468858
Strand: Reverse
Name: 170757166
Synonym: CLD_1339
Alternate gene names: NA
Gene position: 3468858-3468658 (Counterclockwise)
Preceding gene: 170756965
Following gene: 170757387
Centisome position: 87.64
GC content: 36.82
Gene sequence:
>201_bases ATGGCTATGAAAGCTTATGTAGATAAAGATACTTGTGTTGGATGTGGGCTATGTCCTAGTATATGCAGTGAAGTATTTGA AATGCAGGATGATGGAAAAGCTCATGTTATAGTAGAAAATGAGAATGTCCCTGAAGAATTGACACATTTAGCTGAAGAGG CTAGAGATTCTTGTCCTGTAGCAGCTATAGAAGTTGAATAA
Upstream 100 bases:
>100_bases GCATTTAAAAAAATATAAATAATAAAAGGCAATTATTTAATATTGTTAGTTATAAATTTTGAAAGGTAGGTGAAAAATCG TAGTTTTTATTTAAGCTACG
Downstream 100 bases:
>100_bases TAAAACGAGTTCAGTTTTAAGAGACTTCTTTGGTCATATACCACTTATAAGTGGATGTTATAAAAATTTATTTAGAAATA AAAATGTGAATTTTATAAAA
Product: iron-sulfur cluster-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 66; Mature: 65
Protein sequence:
>66_residues MAMKAYVDKDTCVGCGLCPSICSEVFEMQDDGKAHVIVENENVPEELTHLAEEARDSCPVAAIEVE
Sequences:
>Translated_66_residues MAMKAYVDKDTCVGCGLCPSICSEVFEMQDDGKAHVIVENENVPEELTHLAEEARDSCPVAAIEVE >Mature_65_residues AMKAYVDKDTCVGCGLCPSICSEVFEMQDDGKAHVIVENENVPEELTHLAEEARDSCPVAAIEVE
Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]
COG id: COG1141
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001080 - InterPro: IPR001450 - InterPro: IPR017896 - InterPro: IPR017900 [H]
Pfam domain/function: PF00037 Fer4 [H]
EC number: NA
Molecular weight: Translated: 7171; Mature: 7040
Theoretical pI: Translated: 3.90; Mature: 3.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.6 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 12.1 %Cys+Met (Translated Protein) 7.7 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 10.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMKAYVDKDTCVGCGLCPSICSEVFEMQDDGKAHVIVENENVPEELTHLAEEARDSCPV CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCE AAIEVE EEEEEC >Mature Secondary Structure AMKAYVDKDTCVGCGLCPSICSEVFEMQDDGKAHVIVENENVPEELTHLAEEARDSCPV CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCE AAIEVE EEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1445925; 8784186 [H]