| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is hflB [C]
Identifier: 170757155
GI number: 170757155
Start: 1113132
End: 1114805
Strand: Direct
Name: hflB [C]
Synonym: CLD_3563
Alternate gene names: 170757155
Gene position: 1113132-1114805 (Clockwise)
Preceding gene: 170754465
Following gene: 170754531
Centisome position: 28.12
GC content: 33.27
Gene sequence:
>1674_bases ATGAGTATAGAAAATAGCAATAACACAGAAAGAACAAAAAAATACTTGGGAAATATGTTTAAAGCGAGATTTCCCTATGT TTATATATCTACATGGGAAGAGGAAAGAGCTATATCAGTTATAAGTTCGGTTGCAAAGGATGCTTCACTTATAAAGACGC CTAGAACAACTTATATATGGAGTCAAACAAATGGAATGGCTATAGAAAACCTTAAAGGAAAAGAAGAAACTAAACAACCA TTAAAGGCACTGGAATTCATAGAAAAATGTGAAGAGCCAGCAGTTTTTATTTTAAAGGATTTTCATGTGTTTTTTGGAGT GCAAGGAAAAAATATAGATTATAGTCTAATAAGAAAAGTTAGAGATTTAGTAACAGTACTTAAGGCAAGTTCTAACCCTA AAAGTGTAGTGTTTCTTTCACCTACAGTGGTATTGCCTAATGAACTTCAAAAAGATATTACTATTTTAGATTTTGATTTG CCAACTATAGATGAAATTAAGGGTATGCTGGATGAAATGATTTATGTAAATGAGCAAAGTGGAAGAATTGAGATGGATCT TAACGAATCAGAAAAGGAAAAAATTTGTAAAACTGCATTGGGACTTACTCTCCAGGAAGCGGAAAATTCCTTTGCAAGGG CCATGGTTGAGGATGGAAAGCTTAATATTGATGATATTGAAGTGGTTTTAGAAGAAAAATGTCAAGTTATTAAGAAGACA GGAATACTTGAATTTATGAAAAGTGATTTAAAAATGGAGGATGTAGGAGGACTTGAAAATCTAAAAAGATGGATTTCAAA GAGAAACAAATCTTGGCTTGATTCTGCTCAAAAATATAATCTACCTGCACCTAAAGGAGTACTAATAACAGGAGTACCAG GCTGTGGCAAGAGCTTAACTGCCAAAGCTATAAGTGCAATGTGGCAACTTCCACTTTTAAGATTGGATATGGGGAAAATA TTTAGTGGCGTTGTAGGAAGTTCTGAGGAAAATATGAGAAAAGCAATAAAAACAGCGGAAGCAGTATCCCCATCTATACT TTGGATAGATGAAATAGAAAAAGGATTTGGTGGGGCTAGTTCCTCAGGAGATAGTGGAACTTCTATGAGAATTTTTGGAA CCTTTCTTACATGGATGCAAGAAAAGACTAAGCCTGTATTTGTTGTAGCAACAGCCAATAATATAAACAGTCTTCCTTCA GAACTCTTAAGAAAAGGAAGATTTGACGAGATATTTTTTGTAGACTTGCCTACAAGAAATGAAAGAAAGGATATATTTAG ACTACATCTGAAAAAAAGACTTACTAATGAGGAAGTTTGTGAAGAAATTAGTGTTACGGATGAATTATTATCTAATCTTG CAGATATAACAGAAGGATTTGTAGGAGCAGAAATAGAGCAAGCTGTAATAGCTGCACTTTTTGAGGCCTTTTCAGAAGAT AGAGCTTTAAAAGTAACTGATTTGGAAAGAGTAATAAAAAATACAGTTCCACTTTCAGTAACACAAAGAGAGCAAATTAT AAAGATTAGAGAATGGGCAAATGTAAGAGCAGTTGCCGCTACAGCAAAAGAGGATAGAAGTGAGTATTTAGAAGTAAATG AAGAAAAAAAAGATGAAAAAAAGGGAGAAGATGATATAAGAATATCTAGAGGTGGTAGAACTATAGATTTTTAA
Upstream 100 bases:
>100_bases GAAGTGAGACTACATAAGAATGGTACAATCTTTTTAAATGGTATGGGTGATTTTAATAGTTTAAAAAACAAATTAAAAAA TTTAAAGGATGGTGAATAAA
Downstream 100 bases:
>100_bases AGGAGGTATAAACTATGTCTATATCATTAGCATTAGTTCCTGCAGTTTTAACTCTTAAAGTTGTTATGAATGAAAAAGAC CTTGATAACTGGGTAGAAAA
Product: AAA family ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 557; Mature: 556
Protein sequence:
>557_residues MSIENSNNTERTKKYLGNMFKARFPYVYISTWEEERAISVISSVAKDASLIKTPRTTYIWSQTNGMAIENLKGKEETKQP LKALEFIEKCEEPAVFILKDFHVFFGVQGKNIDYSLIRKVRDLVTVLKASSNPKSVVFLSPTVVLPNELQKDITILDFDL PTIDEIKGMLDEMIYVNEQSGRIEMDLNESEKEKICKTALGLTLQEAENSFARAMVEDGKLNIDDIEVVLEEKCQVIKKT GILEFMKSDLKMEDVGGLENLKRWISKRNKSWLDSAQKYNLPAPKGVLITGVPGCGKSLTAKAISAMWQLPLLRLDMGKI FSGVVGSSEENMRKAIKTAEAVSPSILWIDEIEKGFGGASSSGDSGTSMRIFGTFLTWMQEKTKPVFVVATANNINSLPS ELLRKGRFDEIFFVDLPTRNERKDIFRLHLKKRLTNEEVCEEISVTDELLSNLADITEGFVGAEIEQAVIAALFEAFSED RALKVTDLERVIKNTVPLSVTQREQIIKIREWANVRAVAATAKEDRSEYLEVNEEKKDEKKGEDDIRISRGGRTIDF
Sequences:
>Translated_557_residues MSIENSNNTERTKKYLGNMFKARFPYVYISTWEEERAISVISSVAKDASLIKTPRTTYIWSQTNGMAIENLKGKEETKQP LKALEFIEKCEEPAVFILKDFHVFFGVQGKNIDYSLIRKVRDLVTVLKASSNPKSVVFLSPTVVLPNELQKDITILDFDL PTIDEIKGMLDEMIYVNEQSGRIEMDLNESEKEKICKTALGLTLQEAENSFARAMVEDGKLNIDDIEVVLEEKCQVIKKT GILEFMKSDLKMEDVGGLENLKRWISKRNKSWLDSAQKYNLPAPKGVLITGVPGCGKSLTAKAISAMWQLPLLRLDMGKI FSGVVGSSEENMRKAIKTAEAVSPSILWIDEIEKGFGGASSSGDSGTSMRIFGTFLTWMQEKTKPVFVVATANNINSLPS ELLRKGRFDEIFFVDLPTRNERKDIFRLHLKKRLTNEEVCEEISVTDELLSNLADITEGFVGAEIEQAVIAALFEAFSED RALKVTDLERVIKNTVPLSVTQREQIIKIREWANVRAVAATAKEDRSEYLEVNEEKKDEKKGEDDIRISRGGRTIDF >Mature_556_residues SIENSNNTERTKKYLGNMFKARFPYVYISTWEEERAISVISSVAKDASLIKTPRTTYIWSQTNGMAIENLKGKEETKQPL KALEFIEKCEEPAVFILKDFHVFFGVQGKNIDYSLIRKVRDLVTVLKASSNPKSVVFLSPTVVLPNELQKDITILDFDLP TIDEIKGMLDEMIYVNEQSGRIEMDLNESEKEKICKTALGLTLQEAENSFARAMVEDGKLNIDDIEVVLEEKCQVIKKTG ILEFMKSDLKMEDVGGLENLKRWISKRNKSWLDSAQKYNLPAPKGVLITGVPGCGKSLTAKAISAMWQLPLLRLDMGKIF SGVVGSSEENMRKAIKTAEAVSPSILWIDEIEKGFGGASSSGDSGTSMRIFGTFLTWMQEKTKPVFVVATANNINSLPSE LLRKGRFDEIFFVDLPTRNERKDIFRLHLKKRLTNEEVCEEISVTDELLSNLADITEGFVGAEIEQAVIAALFEAFSEDR ALKVTDLERVIKNTVPLSVTQREQIIKIREWANVRAVAATAKEDRSEYLEVNEEKKDEKKGEDDIRISRGGRTIDF
Specific function: Seems To Act As An ATP-Dependent Zinc Metallopeptidase. Involved In The Degradation Of Sigma-32. Degrades Carboxy- Terminal-Tagged Cytoplasmic Proteins. These Proteins Are Tagged With An 11-Amino-Acid Nonpolar Destabilizing Tail VIa A Mechanism Involving
COG id: COG0464
COG function: function code O; ATPases of the AAA+ class
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AAA ATPase family. CDC48 subfamily [H]
Homologues:
Organism=Homo sapiens, GI45643123, Length=252, Percent_Identity=32.1428571428571, Blast_Score=112, Evalue=6e-25, Organism=Homo sapiens, GI45643125, Length=252, Percent_Identity=32.1428571428571, Blast_Score=112, Evalue=7e-25, Organism=Homo sapiens, GI157671927, Length=241, Percent_Identity=32.3651452282158, Blast_Score=109, Evalue=7e-24, Organism=Homo sapiens, GI4507173, Length=266, Percent_Identity=31.203007518797, Blast_Score=103, Evalue=5e-22, Organism=Homo sapiens, GI6005942, Length=220, Percent_Identity=29.5454545454545, Blast_Score=96, Evalue=9e-20, Organism=Homo sapiens, GI300192933, Length=263, Percent_Identity=31.1787072243346, Blast_Score=93, Evalue=6e-19, Organism=Homo sapiens, GI24430151, Length=242, Percent_Identity=28.5123966942149, Blast_Score=89, Evalue=9e-18, Organism=Homo sapiens, GI153792536, Length=247, Percent_Identity=26.7206477732794, Blast_Score=87, Evalue=4e-17, Organism=Homo sapiens, GI24497618, Length=253, Percent_Identity=27.2727272727273, Blast_Score=86, Evalue=1e-16, Organism=Homo sapiens, GI24497435, Length=204, Percent_Identity=29.4117647058824, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI229577436, Length=433, Percent_Identity=22.8637413394919, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI4505725, Length=242, Percent_Identity=25.6198347107438, Blast_Score=81, Evalue=2e-15, Organism=Homo sapiens, GI195539395, Length=209, Percent_Identity=27.2727272727273, Blast_Score=80, Evalue=4e-15, Organism=Homo sapiens, GI5729991, Length=202, Percent_Identity=28.2178217821782, Blast_Score=79, Evalue=9e-15, Organism=Homo sapiens, GI89064750, Length=202, Percent_Identity=28.2178217821782, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI24430155, Length=202, Percent_Identity=28.2178217821782, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI7657689, Length=234, Percent_Identity=28.2051282051282, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI21361144, Length=228, Percent_Identity=27.6315789473684, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI21327685, Length=234, Percent_Identity=28.2051282051282, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI194018488, Length=166, Percent_Identity=34.3373493975904, Blast_Score=78, Evalue=3e-14, Organism=Homo sapiens, GI7019569, Length=194, Percent_Identity=29.8969072164948, Blast_Score=74, Evalue=5e-13, Organism=Homo sapiens, GI31377644, Length=230, Percent_Identity=29.5652173913043, Blast_Score=73, Evalue=6e-13, Organism=Homo sapiens, GI226371754, Length=220, Percent_Identity=29.5454545454545, Blast_Score=71, Evalue=3e-12, Organism=Homo sapiens, GI4506209, Length=270, Percent_Identity=23.7037037037037, Blast_Score=70, Evalue=6e-12, Organism=Homo sapiens, GI156564401, Length=261, Percent_Identity=26.4367816091954, Blast_Score=69, Evalue=8e-12, Organism=Homo sapiens, GI5901990, Length=191, Percent_Identity=28.2722513089005, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI17865802, Length=195, Percent_Identity=29.2307692307692, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI310125280, Length=216, Percent_Identity=27.7777777777778, Blast_Score=67, Evalue=4e-11, Organism=Homo sapiens, GI310125282, Length=216, Percent_Identity=27.7777777777778, Blast_Score=66, Evalue=9e-11, Organism=Escherichia coli, GI1789568, Length=285, Percent_Identity=27.3684210526316, Blast_Score=92, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17508053, Length=250, Percent_Identity=30.4, Blast_Score=109, Evalue=3e-24, Organism=Caenorhabditis elegans, GI17532375, Length=221, Percent_Identity=32.579185520362, Blast_Score=106, Evalue=3e-23, Organism=Caenorhabditis elegans, GI25153574, Length=301, Percent_Identity=28.2392026578073, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17531535, Length=220, Percent_Identity=30.9090909090909, Blast_Score=96, Evalue=5e-20, Organism=Caenorhabditis elegans, GI193209502, Length=229, Percent_Identity=27.9475982532751, Blast_Score=93, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17537217, Length=184, Percent_Identity=30.9782608695652, Blast_Score=92, Evalue=7e-19, Organism=Caenorhabditis elegans, GI115534323, Length=204, Percent_Identity=33.8235294117647, Blast_Score=92, Evalue=7e-19, Organism=Caenorhabditis elegans, GI17554264, Length=220, Percent_Identity=30.9090909090909, Blast_Score=90, Evalue=2e-18, Organism=Caenorhabditis elegans, GI71994521, Length=238, Percent_Identity=34.453781512605, Blast_Score=88, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17562804, Length=170, Percent_Identity=32.9411764705882, Blast_Score=88, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17554784, Length=261, Percent_Identity=29.1187739463602, Blast_Score=87, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17563250, Length=243, Percent_Identity=29.6296296296296, Blast_Score=86, Evalue=6e-17, Organism=Caenorhabditis elegans, GI133931034, Length=208, Percent_Identity=30.2884615384615, Blast_Score=85, Evalue=8e-17, Organism=Caenorhabditis elegans, GI193206114, Length=208, Percent_Identity=30.2884615384615, Blast_Score=85, Evalue=9e-17, Organism=Caenorhabditis elegans, GI193206116, Length=208, Percent_Identity=30.2884615384615, Blast_Score=85, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17554786, Length=247, Percent_Identity=27.5303643724696, Blast_Score=82, Evalue=8e-16, Organism=Caenorhabditis elegans, GI17508701, Length=202, Percent_Identity=27.2277227722772, Blast_Score=80, Evalue=4e-15, Organism=Caenorhabditis elegans, GI25144278, Length=244, Percent_Identity=26.2295081967213, Blast_Score=79, Evalue=8e-15, Organism=Caenorhabditis elegans, GI25144281, Length=195, Percent_Identity=28.2051282051282, Blast_Score=79, Evalue=8e-15, Organism=Caenorhabditis elegans, GI71987372, Length=242, Percent_Identity=24.7933884297521, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI71987364, Length=242, Percent_Identity=24.7933884297521, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI86561515, Length=243, Percent_Identity=27.5720164609054, Blast_Score=73, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17505546, Length=253, Percent_Identity=24.5059288537549, Blast_Score=72, Evalue=1e-12, Organism=Caenorhabditis elegans, GI32563584, Length=251, Percent_Identity=30.6772908366534, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17508421, Length=186, Percent_Identity=33.3333333333333, Blast_Score=71, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17563248, Length=270, Percent_Identity=23.3333333333333, Blast_Score=69, Evalue=7e-12, Organism=Caenorhabditis elegans, GI25146157, Length=309, Percent_Identity=27.1844660194175, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17541224, Length=227, Percent_Identity=23.7885462555066, Blast_Score=66, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17541226, Length=227, Percent_Identity=23.7885462555066, Blast_Score=66, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6323429, Length=379, Percent_Identity=28.2321899736148, Blast_Score=110, Evalue=6e-25, Organism=Saccharomyces cerevisiae, GI6322994, Length=200, Percent_Identity=33, Blast_Score=104, Evalue=5e-23, Organism=Saccharomyces cerevisiae, GI6320077, Length=222, Percent_Identity=33.3333333333333, Blast_Score=101, Evalue=4e-22, Organism=Saccharomyces cerevisiae, GI6320854, Length=221, Percent_Identity=31.2217194570136, Blast_Score=98, Evalue=4e-21, Organism=Saccharomyces cerevisiae, GI6323736, Length=257, Percent_Identity=31.1284046692607, Blast_Score=94, Evalue=5e-20, Organism=Saccharomyces cerevisiae, GI6322651, Length=257, Percent_Identity=27.6264591439689, Blast_Score=94, Evalue=6e-20, Organism=Saccharomyces cerevisiae, GI6319554, Length=245, Percent_Identity=32.2448979591837, Blast_Score=89, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6321709, Length=280, Percent_Identity=26.7857142857143, Blast_Score=88, Evalue=4e-18, Organism=Saccharomyces cerevisiae, GI6320197, Length=300, Percent_Identity=29.3333333333333, Blast_Score=85, Evalue=3e-17, Organism=Saccharomyces cerevisiae, GI6325281, Length=247, Percent_Identity=27.1255060728745, Blast_Score=84, Evalue=7e-17, Organism=Saccharomyces cerevisiae, GI6324833, Length=244, Percent_Identity=27.4590163934426, Blast_Score=82, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6324000, Length=233, Percent_Identity=27.8969957081545, Blast_Score=82, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6324691, Length=227, Percent_Identity=26.431718061674, Blast_Score=80, Evalue=8e-16, Organism=Saccharomyces cerevisiae, GI6320602, Length=190, Percent_Identity=31.0526315789474, Blast_Score=80, Evalue=9e-16, Organism=Saccharomyces cerevisiae, GI6321465, Length=237, Percent_Identity=27.4261603375527, Blast_Score=78, Evalue=3e-15, Organism=Saccharomyces cerevisiae, GI6321390, Length=204, Percent_Identity=25.9803921568627, Blast_Score=75, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6322704, Length=269, Percent_Identity=26.7657992565056, Blast_Score=71, Evalue=6e-13, Organism=Saccharomyces cerevisiae, GI6325431, Length=234, Percent_Identity=27.7777777777778, Blast_Score=70, Evalue=8e-13, Organism=Saccharomyces cerevisiae, GI6325183, Length=298, Percent_Identity=24.496644295302, Blast_Score=64, Evalue=6e-11, Organism=Drosophila melanogaster, GI19921202, Length=456, Percent_Identity=27.4122807017544, Blast_Score=112, Evalue=8e-25, Organism=Drosophila melanogaster, GI24660075, Length=191, Percent_Identity=32.4607329842932, Blast_Score=105, Evalue=7e-23, Organism=Drosophila melanogaster, GI281365776, Length=191, Percent_Identity=32.4607329842932, Blast_Score=105, Evalue=7e-23, Organism=Drosophila melanogaster, GI24639391, Length=254, Percent_Identity=31.8897637795276, Blast_Score=105, Evalue=7e-23, Organism=Drosophila melanogaster, GI45552965, Length=191, Percent_Identity=32.4607329842932, Blast_Score=105, Evalue=9e-23, Organism=Drosophila melanogaster, GI161076486, Length=221, Percent_Identity=30.7692307692308, Blast_Score=103, Evalue=4e-22, Organism=Drosophila melanogaster, GI17137560, Length=223, Percent_Identity=30.4932735426009, Blast_Score=103, Evalue=5e-22, Organism=Drosophila melanogaster, GI161076488, Length=223, Percent_Identity=30.4932735426009, Blast_Score=102, Evalue=5e-22, Organism=Drosophila melanogaster, GI24656825, Length=382, Percent_Identity=23.5602094240838, Blast_Score=99, Evalue=1e-20, Organism=Drosophila melanogaster, GI24656820, Length=382, Percent_Identity=23.5602094240838, Blast_Score=98, Evalue=1e-20, Organism=Drosophila melanogaster, GI24652279, Length=187, Percent_Identity=32.0855614973262, Blast_Score=93, Evalue=5e-19, Organism=Drosophila melanogaster, GI24665814, Length=238, Percent_Identity=32.3529411764706, Blast_Score=92, Evalue=1e-18, Organism=Drosophila melanogaster, GI28574878, Length=238, Percent_Identity=32.3529411764706, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI281363136, Length=169, Percent_Identity=33.1360946745562, Blast_Score=91, Evalue=3e-18, Organism=Drosophila melanogaster, GI78707192, Length=169, Percent_Identity=33.1360946745562, Blast_Score=91, Evalue=3e-18, Organism=Drosophila melanogaster, GI281361487, Length=269, Percent_Identity=28.6245353159851, Blast_Score=90, Evalue=4e-18, Organism=Drosophila melanogaster, GI24658770, Length=233, Percent_Identity=30.9012875536481, Blast_Score=88, Evalue=2e-17, Organism=Drosophila melanogaster, GI24649446, Length=242, Percent_Identity=28.5123966942149, Blast_Score=85, Evalue=1e-16, Organism=Drosophila melanogaster, GI18860063, Length=261, Percent_Identity=27.2030651340996, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI19920408, Length=204, Percent_Identity=28.4313725490196, Blast_Score=82, Evalue=8e-16, Organism=Drosophila melanogaster, GI20129423, Length=188, Percent_Identity=29.2553191489362, Blast_Score=82, Evalue=1e-15, Organism=Drosophila melanogaster, GI20129529, Length=263, Percent_Identity=26.615969581749, Blast_Score=81, Evalue=2e-15, Organism=Drosophila melanogaster, GI24651451, Length=204, Percent_Identity=29.4117647058824, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI17738151, Length=228, Percent_Identity=25.4385964912281, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI21355121, Length=284, Percent_Identity=25.7042253521127, Blast_Score=73, Evalue=4e-13, Organism=Drosophila melanogaster, GI17137738, Length=270, Percent_Identity=23.7037037037037, Blast_Score=72, Evalue=8e-13, Organism=Drosophila melanogaster, GI18859657, Length=195, Percent_Identity=30.7692307692308, Blast_Score=72, Evalue=9e-13, Organism=Drosophila melanogaster, GI24581396, Length=188, Percent_Identity=28.7234042553192, Blast_Score=72, Evalue=9e-13, Organism=Drosophila melanogaster, GI24663015, Length=202, Percent_Identity=28.2178217821782, Blast_Score=72, Evalue=9e-13, Organism=Drosophila melanogaster, GI24640100, Length=202, Percent_Identity=26.7326732673267, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI17864540, Length=202, Percent_Identity=28.7128712871287, Blast_Score=65, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009010 - InterPro: IPR003593 - InterPro: IPR005938 - InterPro: IPR003959 - InterPro: IPR003960 - InterPro: IPR003338 - InterPro: IPR004201 - InterPro: IPR001984 - InterPro: IPR015415 [H]
Pfam domain/function: PF00004 AAA; PF02933 CDC48_2; PF02359 CDC48_N; PF09336 Vps4_C [H]
EC number: 3.4.24.- [C]
Molecular weight: Translated: 62814; Mature: 62683
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIENSNNTERTKKYLGNMFKARFPYVYISTWEEERAISVISSVAKDASLIKTPRTTYIW CCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEE SQTNGMAIENLKGKEETKQPLKALEFIEKCEEPAVFILKDFHVFFGVQGKNIDYSLIRKV ECCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEEHEECCCCCCCHHHHHHH RDLVTVLKASSNPKSVVFLSPTVVLPNELQKDITILDFDLPTIDEIKGMLDEMIYVNEQS HHHHHHHHCCCCCCEEEEECCCEECCHHHCCCCEEEECCCCCHHHHHHHHHHHEEEECCC GRIEMDLNESEKEKICKTALGLTLQEAENSFARAMVEDGKLNIDDIEVVLEEKCQVIKKT CEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH GILEFMKSDLKMEDVGGLENLKRWISKRNKSWLDSAQKYNLPAPKGVLITGVPGCGKSLT HHHHHHHHCCCCHHCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEECCCCCCCHHH AKAISAMWQLPLLRLDMGKIFSGVVGSSEENMRKAIKTAEAVSPSILWIDEIEKGFGGAS HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEHHHHHHCCCCCC SSGDSGTSMRIFGTFLTWMQEKTKPVFVVATANNINSLPSELLRKGRFDEIFFVDLPTRN CCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCC ERKDIFRLHLKKRLTNEEVCEEISVTDELLSNLADITEGFVGAEIEQAVIAALFEAFSED CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC RALKVTDLERVIKNTVPLSVTQREQIIKIREWANVRAVAATAKEDRSEYLEVNEEKKDEK CCEEHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHH KGEDDIRISRGGRTIDF CCCCCEEEECCCCCCCC >Mature Secondary Structure SIENSNNTERTKKYLGNMFKARFPYVYISTWEEERAISVISSVAKDASLIKTPRTTYIW CCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEE SQTNGMAIENLKGKEETKQPLKALEFIEKCEEPAVFILKDFHVFFGVQGKNIDYSLIRKV ECCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEEHEECCCCCCCHHHHHHH RDLVTVLKASSNPKSVVFLSPTVVLPNELQKDITILDFDLPTIDEIKGMLDEMIYVNEQS HHHHHHHHCCCCCCEEEEECCCEECCHHHCCCCEEEECCCCCHHHHHHHHHHHEEEECCC GRIEMDLNESEKEKICKTALGLTLQEAENSFARAMVEDGKLNIDDIEVVLEEKCQVIKKT CEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH GILEFMKSDLKMEDVGGLENLKRWISKRNKSWLDSAQKYNLPAPKGVLITGVPGCGKSLT HHHHHHHHCCCCHHCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEECCCCCCCHHH AKAISAMWQLPLLRLDMGKIFSGVVGSSEENMRKAIKTAEAVSPSILWIDEIEKGFGGAS HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEHHHHHHCCCCCC SSGDSGTSMRIFGTFLTWMQEKTKPVFVVATANNINSLPSELLRKGRFDEIFFVDLPTRN CCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCC ERKDIFRLHLKKRLTNEEVCEEISVTDELLSNLADITEGFVGAEIEQAVIAALFEAFSED CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC RALKVTDLERVIKNTVPLSVTQREQIIKIREWANVRAVAATAKEDRSEYLEVNEEKKDEK CCEEHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHH KGEDDIRISRGGRTIDF CCCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Metalloendopeptidases [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]