Click here to switch to the map view.

The map label for this gene is 170757140

Identifier: 170757140

GI number: 170757140

Start: 2208596

End: 2209123

Strand: Reverse

Name: 170757140

Synonym: CLD_2568

Alternate gene names: NA

Gene position: 2209123-2208596 (Counterclockwise)

Preceding gene: 170756926

Following gene: 170754534

Centisome position: 55.81

GC content: 27.65

Gene sequence:

>528_bases
ATGCCTGGTGGTTTACATGCTATTACTGGTATAAATCAATCAGAACTATGCGATATTCAAGCACAAGTAGGTGAAGTTGA
CAAGCATTTGTCATATTCATTAATTCATGCTATGGAAATTTCAAATAATATAGACGATATGATTTCAATGGTTAACATGA
TTTTTCTGAAAGCAATAGAAAAAAAGAACAGACAACATGTAGTTATAGAGTCTACTTTAGATAGAATTAAGGCTACAAAT
GGAAGATTAACGATAAAAGAATTATCAGCAAATGAATATATTAGTGAACGTCATTTGAATAGGCTATTTAATGAGTATAT
TGGAATAAATGCTAAAATGTTTTCAAGACTTGTAAGAGTAAATCATTCAATCAATATATTTAAAAAAATTGATTATAAGA
GTTGCTTAAATATAGCTCAAATCTTAGGTTGTTTTGACCAATCACATTTTATTCGGGATTTTAAGCAAATATGTGACGTT
TCTCCTAATTTATTTTTAAAAAACATGTCCGATTTTTACAATGTGTAA

Upstream 100 bases:

>100_bases
TGAATTAGATTATTAATTGGAAGTATTTATGGAATATTATAAGTGAATATAGTATAATTATGGATGCATTTTATACTTGA
AATAGGGGGGGATTGAGTTT

Downstream 100 bases:

>100_bases
GTAATAAGCCTTCAAAAGACAAGTAGAGAGGCGCTATCCCTTGAGGGCAACGCCTCTCTCTTGCTTTTCCGTATCGGTTT
AGGGTATGATTCAATAGGTT

Product: AraC family transcription regulator

Products: NA

Alternate protein names: AraC Family Transcription Regulator; AraC Family Transcriptional Regulator; Transcriptional Regulator; Arac/Xyls Family Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; AraC-Family Transcriptional Regulator

Number of amino acids: Translated: 175; Mature: 174

Protein sequence:

>175_residues
MPGGLHAITGINQSELCDIQAQVGEVDKHLSYSLIHAMEISNNIDDMISMVNMIFLKAIEKKNRQHVVIESTLDRIKATN
GRLTIKELSANEYISERHLNRLFNEYIGINAKMFSRLVRVNHSINIFKKIDYKSCLNIAQILGCFDQSHFIRDFKQICDV
SPNLFLKNMSDFYNV

Sequences:

>Translated_175_residues
MPGGLHAITGINQSELCDIQAQVGEVDKHLSYSLIHAMEISNNIDDMISMVNMIFLKAIEKKNRQHVVIESTLDRIKATN
GRLTIKELSANEYISERHLNRLFNEYIGINAKMFSRLVRVNHSINIFKKIDYKSCLNIAQILGCFDQSHFIRDFKQICDV
SPNLFLKNMSDFYNV
>Mature_174_residues
PGGLHAITGINQSELCDIQAQVGEVDKHLSYSLIHAMEISNNIDDMISMVNMIFLKAIEKKNRQHVVIESTLDRIKATNG
RLTIKELSANEYISERHLNRLFNEYIGINAKMFSRLVRVNHSINIFKKIDYKSCLNIAQILGCFDQSHFIRDFKQICDVS
PNLFLKNMSDFYNV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20138; Mature: 20006

Theoretical pI: Translated: 8.00; Mature: 8.00

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGGLHAITGINQSELCDIQAQVGEVDKHLSYSLIHAMEISNNIDDMISMVNMIFLKAIE
CCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
KKNRQHVVIESTLDRIKATNGRLTIKELSANEYISERHLNRLFNEYIGINAKMFSRLVRV
HCCCCEEHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
NHSINIFKKIDYKSCLNIAQILGCFDQSHFIRDFKQICDVSPNLFLKNMSDFYNV
CCCHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
PGGLHAITGINQSELCDIQAQVGEVDKHLSYSLIHAMEISNNIDDMISMVNMIFLKAIE
CCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
KKNRQHVVIESTLDRIKATNGRLTIKELSANEYISERHLNRLFNEYIGINAKMFSRLVRV
HCCCCEEHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
NHSINIFKKIDYKSCLNIAQILGCFDQSHFIRDFKQICDVSPNLFLKNMSDFYNV
CCCHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA