Click here to switch to the map view.

The map label for this gene is accD

Identifier: 170757112

GI number: 170757112

Start: 3910239

End: 3911108

Strand: Reverse

Name: accD

Synonym: CLD_0891

Alternate gene names: 170757112

Gene position: 3911108-3910239 (Counterclockwise)

Preceding gene: 170756739

Following gene: 170755123

Centisome position: 98.81

GC content: 29.08

Gene sequence:

>870_bases
ATGTTAAAAAATTTATTTAGAAAAACAAAGTATATAACTGTAAGTCAAAAGAATATAGAAAATTATAAAAGAGAAAATAC
TCCTACTATTCCAGATGGAATGTGGGTTAAATGTAATAAATGTGGAGAGATATTATACCAAAATGATTTAGAAAAGAATT
ATATGGTATGTAATTTATGTGGAAATCATTTTAGAATAGGTGTTAAAGAAAGAATAAAATATTTATTCGATAAAGATACC
TTTAAAGAATGGGATTATAAAATTAAAACAGAAAATCCATTAGATTTTAAAGGTTACGATGAAAAAATAGAACATATAAA
AGAAAAAACAAACTTAAGTGAAGCTGTTACAACAGGTAAAGGTAAAATAGCTGGTATGGAAGCCGTAGTATGTATAATGG
ATAGTAAATTCATGATGGGAAGTATGGGATGTGTTGTAGGAGAAAAAATAACTAGGGCTATAGAAAGAGCTATAAAATTA
AGATTGCCAGTTATAATATTTACTGCATCTGGTGGGGCAAGAATGCAGGAAGGAATATTATCTTTAATGCAAATGGCTAA
AGTAAGTTCTGCATTAGCAAAATTAGATGAAGAAGGGTTATTGTATATATGTGTACTAACAGATCCAACTACAGGAGGGG
TCACAGCTAGTTTTGCTATGCTTGGAGATATAATACTTGCTGAGCCAGATGCGTTAATAGGATTTGCAGGTAAGAGGGTA
ATAGAACAAACCATAAATGAAAAGTTACCAGAGGATTTTCAGAAATCTGAATTTTTATTAGAGCATGGTTTTATTGATAA
AATAGTCCCAAGGTCTGATTTAAGAAAAGTTTTAGCAAAGCTTATTAATATGCATCAAAATTCTTTTTAA

Upstream 100 bases:

>100_bases
TTTATTATATTAGAGGATGAAAATTTTATAAAGGGAGAATACACTACAAAATATATAGAAAAAATGCTAACTGACAATTA
GTGTAGTCAGGGGGAAGTAT

Downstream 100 bases:

>100_bases
GATTATACATTAATATTATTTCTTAATTTAGATTGGAGATATAAATATGGAAGATAAAAAATTGATTCATAATGTAAAAA
AATATGCTTCTAAAAATGCT

Product: acetyl-CoA carboxylase, carboxyl transferase, beta subunit

Products: NA

Alternate protein names: ACCase subunit beta; Acetyl-CoA carboxylase carboxyltransferase subunit beta [H]

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MLKNLFRKTKYITVSQKNIENYKRENTPTIPDGMWVKCNKCGEILYQNDLEKNYMVCNLCGNHFRIGVKERIKYLFDKDT
FKEWDYKIKTENPLDFKGYDEKIEHIKEKTNLSEAVTTGKGKIAGMEAVVCIMDSKFMMGSMGCVVGEKITRAIERAIKL
RLPVIIFTASGGARMQEGILSLMQMAKVSSALAKLDEEGLLYICVLTDPTTGGVTASFAMLGDIILAEPDALIGFAGKRV
IEQTINEKLPEDFQKSEFLLEHGFIDKIVPRSDLRKVLAKLINMHQNSF

Sequences:

>Translated_289_residues
MLKNLFRKTKYITVSQKNIENYKRENTPTIPDGMWVKCNKCGEILYQNDLEKNYMVCNLCGNHFRIGVKERIKYLFDKDT
FKEWDYKIKTENPLDFKGYDEKIEHIKEKTNLSEAVTTGKGKIAGMEAVVCIMDSKFMMGSMGCVVGEKITRAIERAIKL
RLPVIIFTASGGARMQEGILSLMQMAKVSSALAKLDEEGLLYICVLTDPTTGGVTASFAMLGDIILAEPDALIGFAGKRV
IEQTINEKLPEDFQKSEFLLEHGFIDKIVPRSDLRKVLAKLINMHQNSF
>Mature_289_residues
MLKNLFRKTKYITVSQKNIENYKRENTPTIPDGMWVKCNKCGEILYQNDLEKNYMVCNLCGNHFRIGVKERIKYLFDKDT
FKEWDYKIKTENPLDFKGYDEKIEHIKEKTNLSEAVTTGKGKIAGMEAVVCIMDSKFMMGSMGCVVGEKITRAIERAIKL
RLPVIIFTASGGARMQEGILSLMQMAKVSSALAKLDEEGLLYICVLTDPTTGGVTASFAMLGDIILAEPDALIGFAGKRV
IEQTINEKLPEDFQKSEFLLEHGFIDKIVPRSDLRKVLAKLINMHQNSF

Specific function: Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA [H

COG id: COG0777

COG function: function code I; Acetyl-CoA carboxylase beta subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AccD/PCCB family [H]

Homologues:

Organism=Escherichia coli, GI1788655, Length=277, Percent_Identity=49.4584837545126, Blast_Score=273, Evalue=1e-74,
Organism=Caenorhabditis elegans, GI25147359, Length=190, Percent_Identity=27.8947368421053, Blast_Score=68, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI25147362, Length=190, Percent_Identity=27.8947368421053, Blast_Score=68, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000438
- InterPro:   IPR000022
- InterPro:   IPR011762 [H]

Pfam domain/function: PF01039 Carboxyl_trans [H]

EC number: =6.4.1.2 [H]

Molecular weight: Translated: 32713; Mature: 32713

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: PS50980 COA_CT_NTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKNLFRKTKYITVSQKNIENYKRENTPTIPDGMWVKCNKCGEILYQNDLEKNYMVCNLC
CCHHHHHHHHEEEEEHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHHCCCCCCCEEEEEC
GNHFRIGVKERIKYLFDKDTFKEWDYKIKTENPLDFKGYDEKIEHIKEKTNLSEAVTTGK
CCCEEECHHHHHHHHHCCCCHHCCCEEECCCCCCCCCCHHHHHHHHHHHHCHHHHHHCCC
GKIAGMEAVVCIMDSKFMMGSMGCVVGEKITRAIERAIKLRLPVIIFTASGGARMQEGIL
CCCCCHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHH
SLMQMAKVSSALAKLDEEGLLYICVLTDPTTGGVTASFAMLGDIILAEPDALIGFAGKRV
HHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHEECCCHHHHHHHHHH
IEQTINEKLPEDFQKSEFLLEHGFIDKIVPRSDLRKVLAKLINMHQNSF
HHHHHHHHCCHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLKNLFRKTKYITVSQKNIENYKRENTPTIPDGMWVKCNKCGEILYQNDLEKNYMVCNLC
CCHHHHHHHHEEEEEHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHHCCCCCCCEEEEEC
GNHFRIGVKERIKYLFDKDTFKEWDYKIKTENPLDFKGYDEKIEHIKEKTNLSEAVTTGK
CCCEEECHHHHHHHHHCCCCHHCCCEEECCCCCCCCCCHHHHHHHHHHHHCHHHHHHCCC
GKIAGMEAVVCIMDSKFMMGSMGCVVGEKITRAIERAIKLRLPVIIFTASGGARMQEGIL
CCCCCHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHH
SLMQMAKVSSALAKLDEEGLLYICVLTDPTTGGVTASFAMLGDIILAEPDALIGFAGKRV
HHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHEECCCHHHHHHHHHH
IEQTINEKLPEDFQKSEFLLEHGFIDKIVPRSDLRKVLAKLINMHQNSF
HHHHHHHHCCHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA