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The map label for this gene is mreD

Identifier: 170757079

GI number: 170757079

Start: 3252801

End: 3253292

Strand: Reverse

Name: mreD

Synonym: CLD_1544

Alternate gene names: NA

Gene position: 3253292-3252801 (Counterclockwise)

Preceding gene: 170757687

Following gene: 170755210

Centisome position: 82.19

GC content: 23.37

Gene sequence:

>492_bases
ATGAAAAAAAAATTAATATTAGGAGCTATTTTAATATTACTTAGCATATTGGATAATTCTTTAATGCCATTTATGGCATT
AAAAGGGGTATATCCAAGCCTTTTATTCGTTTTTATAGTAAGTTACTCTATAATAAAGGATAAATGGGAGGCTATTTGGA
TTGGTATTTTCGCAGGCATTCTTCAAGATTTATATTTTGCTAATGTATTTGGGATAAATTCTTTAATAAATATGTTTGTT
TGCTTAATAGCAGCTGAAATAGGTGTAAATATAATAAAAAGTAAAATATTAATACCAGTGATATCTTCTTTTGCACTAAG
CATATTTAAAGGAGTTTTCATATGGGTTATAGCTTATTTTTTAAAGATTAATATAAGTTATAGTTTAATAGCTTTTAATA
GTATATATAATGGGGTAATAACAATTATAGTTTATAAATTAGTATATAATTTATGTAGAAAAAAATATATGGATAAAAAG
TGGGAATTCTAA

Upstream 100 bases:

>100_bases
AATGCTATAATTAAACCTTATGTAGATTTAAGAAAAATAGAAGAAGTATTTATAGTAATGCCTAAAAATAAAGAAGAAGT
AAAATATTAAGGTGATGCAT

Downstream 100 bases:

>100_bases
AGGAATGGTGATTTAGTCAATGAAGATAAACAAAGATAAAAAATTTACTAGATTTGGTGGTCTTATGTTGGTAATGGTAT
TTATAATTACCGCAATTATA

Product: rod shape-determining protein MreD

Products: NA

Alternate protein names: Rod Shape Determining Protein MreD

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MKKKLILGAILILLSILDNSLMPFMALKGVYPSLLFVFIVSYSIIKDKWEAIWIGIFAGILQDLYFANVFGINSLINMFV
CLIAAEIGVNIIKSKILIPVISSFALSIFKGVFIWVIAYFLKINISYSLIAFNSIYNGVITIIVYKLVYNLCRKKYMDKK
WEF

Sequences:

>Translated_163_residues
MKKKLILGAILILLSILDNSLMPFMALKGVYPSLLFVFIVSYSIIKDKWEAIWIGIFAGILQDLYFANVFGINSLINMFV
CLIAAEIGVNIIKSKILIPVISSFALSIFKGVFIWVIAYFLKINISYSLIAFNSIYNGVITIIVYKLVYNLCRKKYMDKK
WEF
>Mature_163_residues
MKKKLILGAILILLSILDNSLMPFMALKGVYPSLLFVFIVSYSIIKDKWEAIWIGIFAGILQDLYFANVFGINSLINMFV
CLIAAEIGVNIIKSKILIPVISSFALSIFKGVFIWVIAYFLKINISYSLIAFNSIYNGVITIIVYKLVYNLCRKKYMDKK
WEF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18628; Mature: 18628

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKLILGAILILLSILDNSLMPFMALKGVYPSLLFVFIVSYSIIKDKWEAIWIGIFAGI
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQDLYFANVFGINSLINMFVCLIAAEIGVNIIKSKILIPVISSFALSIFKGVFIWVIAYF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKINISYSLIAFNSIYNGVITIIVYKLVYNLCRKKYMDKKWEF
HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKKKLILGAILILLSILDNSLMPFMALKGVYPSLLFVFIVSYSIIKDKWEAIWIGIFAGI
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQDLYFANVFGINSLINMFVCLIAAEIGVNIIKSKILIPVISSFALSIFKGVFIWVIAYF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKINISYSLIAFNSIYNGVITIIVYKLVYNLCRKKYMDKKWEF
HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA