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The map label for this gene is 170757051

Identifier: 170757051

GI number: 170757051

Start: 695846

End: 696058

Strand: Direct

Name: 170757051

Synonym: CLD_0180

Alternate gene names: NA

Gene position: 695846-696058 (Clockwise)

Preceding gene: 170756535

Following gene: 170756149

Centisome position: 17.58

GC content: 32.39

Gene sequence:

>213_bases
GTGAAAAATAGGGTAAAAGAATTACGAACTGCATCCAATATGACACAACAGCAGCTTGCTGATTTAGTTTCAGTTTCCTC
AAGAACCATTATTTCACTTGAAAAAGGACAATACAATCCCTCAATTATGTTGGCATATAAAATAGCGCGTGTTTTTAACA
CAACTATTGAAGAGTTATATTGTTTAAAGGAGAATTGGGAAAATGAAGATTAA

Upstream 100 bases:

>100_bases
TTTATTAGTTAATAATTGACAATATACTTATACAATGATAATATGAAGTTAACTTCACATGAAGCTTGCTTCGTATTCTT
ATTTTTAGGGAGGTGTATAA

Downstream 100 bases:

>100_bases
AATATATAATAAAAAGAAGTTTTTAAGTGGTATGGCATTTTTATTATTAGCAGCAATTAGTATTCCATTTATAATTACAC
GCTTTAGCAATTTAGACACC

Product: DNA binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 70; Mature: 70

Protein sequence:

>70_residues
MKNRVKELRTASNMTQQQLADLVSVSSRTIISLEKGQYNPSIMLAYKIARVFNTTIEELYCLKENWENED

Sequences:

>Translated_70_residues
MKNRVKELRTASNMTQQQLADLVSVSSRTIISLEKGQYNPSIMLAYKIARVFNTTIEELYCLKENWENED
>Mature_70_residues
MKNRVKELRTASNMTQQQLADLVSVSSRTIISLEKGQYNPSIMLAYKIARVFNTTIEELYCLKENWENED

Specific function: Unknown

COG id: COG1476

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 8155; Mature: 8155

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNRVKELRTASNMTQQQLADLVSVSSRTIISLEKGQYNPSIMLAYKIARVFNTTIEELY
CCHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
CLKENWENED
HHHHCCCCCC
>Mature Secondary Structure
MKNRVKELRTASNMTQQQLADLVSVSSRTIISLEKGQYNPSIMLAYKIARVFNTTIEELY
CCHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
CLKENWENED
HHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]