| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is sagC
Identifier: 170757045
GI number: 170757045
Start: 603185
End: 604267
Strand: Direct
Name: sagC
Synonym: CLD_0260
Alternate gene names: NA
Gene position: 603185-604267 (Clockwise)
Preceding gene: 170756767
Following gene: 170755485
Centisome position: 15.24
GC content: 24.84
Gene sequence:
>1083_bases ATGAAAAATAACACTATATATAGATTAAGTAATAATTTAAGAATATACGATAATGGTGAAAATGAAATAAGATTTAGAAG TGGACTTTGGAATTACAATGAAGCGGTTTTAGACTTGAGCGCTGAAACAGAAAATTTTACAAAGTATTTTAGGAAAGTTA TTGATAATCTAAAAAACAATAAGGGCATATCAGTAAAGGATTTAGATGGATATGAATTAAACAATGAAGAAAAAAATAAT TTAATTAGTATTATAGATTCCTTAAATGAAGCTGGTATGTTATGTAGTGAAGATGAAAAAGATAATGACTTTGCAATGTC CAAAATATTATTAGGAGATTTTAGCTATAATCTTAATAAAAAGGAAGAAAATAATCAAAAGCTATTATTTATATCAGATA ATGATTATGCAAAACAAACTGCTAAAAATTTATCCGATGGGATGAATATAAATTTAGATTTGTATTCAAAAGAAAATATA GATAATATAATTTCTAAAGATTTAACATCAAATTTAGATGCCCTAGAAAAAAAATCTAATATAGATGATATAAAAAATCA ATTAAAAAATTATTCGGCTATATTAATATGCATGAGTCATATTAACATGAATTTATTTAGAAATATAAATAGAGTATCTA TAGAACTAAAAAAACCTATTATTATGTCTTTTATTGATGGACCTTTTATAACTACTTTAAGTACATTGCCACCTAAAACC GGCTGTTTAGAGTGCTTTGAGCAAAGAATCTTATCAAGACTTGAAGATCATGTTTTATATCACAAATTTATAGAAAGTGA TTTTAACCCTAGTGATAAATCTCATAAATCCATAATTCCTTTATTAAATATTATGACTAACATGGTCATATCTGAAGGAT TTTTAATAAACAATTTTAATACCTGCAAAATTGAAGGTAGAGTACTTAGTATATTTGTTCCAACATTAGAAATACAATCT CAAGACCTATTGAGAGTTCCATTTTGCCCAGCTTGCGGAAATATATCAAAGGCTAAATTGAAAGAAATAAACATATCTAC TAGGAATATTGTGGATGGAATTTTAGAAGATATTAATTCTTAA
Upstream 100 bases:
>100_bases ATATGAAAAACAATACATAGAAGAGGTTTTAAATATAGATGGAGTATTAAAACACGTAGTACATATGACTGTTGTAGGTT CAGAACAGGGGGATTAATTT
Downstream 100 bases:
>100_bases CTAGGAGGCTTTAACATGATAAAATTTTTCCCAAGTTTTAATAATATATTAGAGAATTTTAAATCATTAGCAGGAAATCA AAGTGGTATATTAGAGGCTA
Product: streptolysin associated protein SagC
Products: NA
Alternate protein names: Streptolysin S Biosynthesis Protein
Number of amino acids: Translated: 360; Mature: 360
Protein sequence:
>360_residues MKNNTIYRLSNNLRIYDNGENEIRFRSGLWNYNEAVLDLSAETENFTKYFRKVIDNLKNNKGISVKDLDGYELNNEEKNN LISIIDSLNEAGMLCSEDEKDNDFAMSKILLGDFSYNLNKKEENNQKLLFISDNDYAKQTAKNLSDGMNINLDLYSKENI DNIISKDLTSNLDALEKKSNIDDIKNQLKNYSAILICMSHINMNLFRNINRVSIELKKPIIMSFIDGPFITTLSTLPPKT GCLECFEQRILSRLEDHVLYHKFIESDFNPSDKSHKSIIPLLNIMTNMVISEGFLINNFNTCKIEGRVLSIFVPTLEIQS QDLLRVPFCPACGNISKAKLKEINISTRNIVDGILEDINS
Sequences:
>Translated_360_residues MKNNTIYRLSNNLRIYDNGENEIRFRSGLWNYNEAVLDLSAETENFTKYFRKVIDNLKNNKGISVKDLDGYELNNEEKNN LISIIDSLNEAGMLCSEDEKDNDFAMSKILLGDFSYNLNKKEENNQKLLFISDNDYAKQTAKNLSDGMNINLDLYSKENI DNIISKDLTSNLDALEKKSNIDDIKNQLKNYSAILICMSHINMNLFRNINRVSIELKKPIIMSFIDGPFITTLSTLPPKT GCLECFEQRILSRLEDHVLYHKFIESDFNPSDKSHKSIIPLLNIMTNMVISEGFLINNFNTCKIEGRVLSIFVPTLEIQS QDLLRVPFCPACGNISKAKLKEINISTRNIVDGILEDINS >Mature_360_residues MKNNTIYRLSNNLRIYDNGENEIRFRSGLWNYNEAVLDLSAETENFTKYFRKVIDNLKNNKGISVKDLDGYELNNEEKNN LISIIDSLNEAGMLCSEDEKDNDFAMSKILLGDFSYNLNKKEENNQKLLFISDNDYAKQTAKNLSDGMNINLDLYSKENI DNIISKDLTSNLDALEKKSNIDDIKNQLKNYSAILICMSHINMNLFRNINRVSIELKKPIIMSFIDGPFITTLSTLPPKT GCLECFEQRILSRLEDHVLYHKFIESDFNPSDKSHKSIIPLLNIMTNMVISEGFLINNFNTCKIEGRVLSIFVPTLEIQS QDLLRVPFCPACGNISKAKLKEINISTRNIVDGILEDINS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41211; Mature: 41211
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNNTIYRLSNNLRIYDNGENEIRFRSGLWNYNEAVLDLSAETENFTKYFRKVIDNLKNN CCCCEEEEEECCEEEEECCCCCEEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCC KGISVKDLDGYELNNEEKNNLISIIDSLNEAGMLCSEDEKDNDFAMSKILLGDFSYNLNK CCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC KEENNQKLLFISDNDYAKQTAKNLSDGMNINLDLYSKENIDNIISKDLTSNLDALEKKSN CCCCCCEEEEEECCHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHCCHHHHHHHCC IDDIKNQLKNYSAILICMSHINMNLFRNINRVSIELKKPIIMSFIDGPFITTLSTLPPKT HHHHHHHHHCHHEEEEHHHHHCHHHHHCCCEEEEEECCCCEEHHCCCCHHHHHHCCCCCH GCLECFEQRILSRLEDHVLYHKFIESDFNPSDKSHKSIIPLLNIMTNMVISEGFLINNFN HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEECCC TCKIEGRVLSIFVPTLEIQSQDLLRVPFCPACGNISKAKLKEINISTRNIVDGILEDINS EEEECCEEEEEEEEEEEECCCCCEECCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MKNNTIYRLSNNLRIYDNGENEIRFRSGLWNYNEAVLDLSAETENFTKYFRKVIDNLKNN CCCCEEEEEECCEEEEECCCCCEEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCC KGISVKDLDGYELNNEEKNNLISIIDSLNEAGMLCSEDEKDNDFAMSKILLGDFSYNLNK CCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC KEENNQKLLFISDNDYAKQTAKNLSDGMNINLDLYSKENIDNIISKDLTSNLDALEKKSN CCCCCCEEEEEECCHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHCCHHHHHHHCC IDDIKNQLKNYSAILICMSHINMNLFRNINRVSIELKKPIIMSFIDGPFITTLSTLPPKT HHHHHHHHHCHHEEEEHHHHHCHHHHHCCCEEEEEECCCCEEHHCCCCHHHHHHCCCCCH GCLECFEQRILSRLEDHVLYHKFIESDFNPSDKSHKSIIPLLNIMTNMVISEGFLINNFN HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEECCC TCKIEGRVLSIFVPTLEIQSQDLLRVPFCPACGNISKAKLKEINISTRNIVDGILEDINS EEEECCEEEEEEEEEEEECCCCCEECCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA