| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757038
Identifier: 170757038
GI number: 170757038
Start: 1285918
End: 1286334
Strand: Direct
Name: 170757038
Synonym: CLD_3408
Alternate gene names: NA
Gene position: 1285918-1286334 (Clockwise)
Preceding gene: 170754380
Following gene: 170756473
Centisome position: 32.49
GC content: 32.61
Gene sequence:
>417_bases TTGAAAATACAAAGTGAAAAAGTAGCTAAGGCTTCAGTTAAAATGGCAATTTCCTCAAGAGAGGAAGAAAAAATATTAAT AGAAAAATTTAAGGCAGAGGATATTTTAACTACAGCAGTAGATGTAGGCGGTAATATAAATTCATCTATGACTAAAATAA TAGAGAGAGCATTAGTGGCATCTAAAAGATGTGGACTTATAAAGGATTGCCATGTAGATGATGGAGCTGTAGTTGGAGCT ACAAGAGAAGCTTTACTTCAAATTATGGAAAAGGCTAATGGATTAAATGTAGGTGGCAAAATAGGAATAGCAAGATCAGA AGAACATATAAGTGTGTGCATATTTATGAGTATAGGCCTTTTACATTTAAATGAGGTAGTTATAGGATTGGGACATAGAT CAATCCCAAATATTTAG
Upstream 100 bases:
>100_bases AATATAATTAAATTTTAATTTTACATTTTATAGACACTTACTTAGTTAATATAGTAAAAATTAAAACTTCTATAAAAATC CTATAACAGGGGGTATTATT
Downstream 100 bases:
>100_bases TATGAATTTAAATGCTTTTTATATAATTTATGAATAAGTATATAACTATAATAGTATAAAATAATTAAATAATTTTACAA TTTAATAAAAAATACATATA
Product: hypothetical protein
Products: NA
Alternate protein names: HUTP Family Protein; HutP Protein; HutP Superfamily
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MKIQSEKVAKASVKMAISSREEEKILIEKFKAEDILTTAVDVGGNINSSMTKIIERALVASKRCGLIKDCHVDDGAVVGA TREALLQIMEKANGLNVGGKIGIARSEEHISVCIFMSIGLLHLNEVVIGLGHRSIPNI
Sequences:
>Translated_138_residues MKIQSEKVAKASVKMAISSREEEKILIEKFKAEDILTTAVDVGGNINSSMTKIIERALVASKRCGLIKDCHVDDGAVVGA TREALLQIMEKANGLNVGGKIGIARSEEHISVCIFMSIGLLHLNEVVIGLGHRSIPNI >Mature_138_residues MKIQSEKVAKASVKMAISSREEEKILIEKFKAEDILTTAVDVGGNINSSMTKIIERALVASKRCGLIKDCHVDDGAVVGA TREALLQIMEKANGLNVGGKIGIARSEEHISVCIFMSIGLLHLNEVVIGLGHRSIPNI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14836; Mature: 14836
Theoretical pI: Translated: 8.09; Mature: 8.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIQSEKVAKASVKMAISSREEEKILIEKFKAEDILTTAVDVGGNINSSMTKIIERALVA CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH SKRCGLIKDCHVDDGAVVGATREALLQIMEKANGLNVGGKIGIARSEEHISVCIFMSIGL HHCCCCCEECCCCCCEEECHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHEEHHHHHHHH LHLNEVVIGLGHRSIPNI HHHHHHHHCCCCCCCCCC >Mature Secondary Structure MKIQSEKVAKASVKMAISSREEEKILIEKFKAEDILTTAVDVGGNINSSMTKIIERALVA CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH SKRCGLIKDCHVDDGAVVGATREALLQIMEKANGLNVGGKIGIARSEEHISVCIFMSIGL HHCCCCCEECCCCCCEEECHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHEEHHHHHHHH LHLNEVVIGLGHRSIPNI HHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA