| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757002
Identifier: 170757002
GI number: 170757002
Start: 2669427
End: 2670335
Strand: Reverse
Name: 170757002
Synonym: CLD_2088
Alternate gene names: NA
Gene position: 2670335-2669427 (Counterclockwise)
Preceding gene: 170756416
Following gene: 170755078
Centisome position: 67.46
GC content: 28.93
Gene sequence:
>909_bases ATGGAAATAACAGGCCGACTATATGCAATTTTTAGAGTGGGAGAAAAGAAGTATAAAACTATAGGATCTATAGCAGGATA CCAACGCCACATGGAAAGAGAACAATATACTCCAAATGCAAATACTAATACAGCTAACCTAAGACTTATAGGAAGCAATT TTATAATGGCAGATGTAAAAGAATATATAGAAGGTATTAAGCTTAGAAAAAATGGTGTTATAGCTAGAGATTTATTATTA ACTGCATCACCAGCATTTTTTAGAGATTTATCTATACAAGAAAAAGAAAAATGGGTTAATACTAACATAGAGTTTTTAGA AAAACATTTTGGAGAAAACTGTGTATATGCAATGCTCCACCGAGACGAAACTACTTGGCATATAAGTGCCATGATAGTAC CAAGATTTTGGGATGAGAAAAGAAAAAGGTATGTGCTGGCCAATAGTAGATATTTTGATGGTAAGAAAAAACTTAGTGAA TGGCAGGATGAATACAGCAGTTTTATCAAACAACAATTTAAAGAACTTAATAGAGGACAAAGAGGATCTAAAGCACACCA TGTTAAAATTTCTAATTTTTATAGAATATTAAATAGTGAATTAGATAGTTATAATGCTTTAGAAGTTATTAAAAAAAGTA AACAATCAATTGCATTAAAAGAACAATTAGAAAATGTACAAAGTACTCTAAATAAATATAAAGATTATGCTAAGTTAACA ACATTAGAAAAACAAGAATTATTAAATAATCTCAAAGATATAAAACAGGATAAGGTAGTTTTTAAAGAAACTATTAAAGC TATGTCAGAAATATATAAAATATCCCAGCAGAGCATTGCGAAAATAATAGATAGTGTAGATAAAAATTTACAAAGAGGTG GAGATAGTGACAACGAGAGAAGAGTATGA
Upstream 100 bases:
>100_bases TTAAAATAGAGCAAAGAATAAAAGAACAGGAAGAAAAATTAATACTAGAAGGAATTAAAAAATTAGACCAACAGAGCACT AATAGGCTGGTTGAGGAGCT
Downstream 100 bases:
>100_bases ATTAAGACTTAAGATTATAGAACAATGGATAGAAATTAAGCCTAACGAGGAACTAATGGAAGCTTTAAAAACTGCCCAAA GAGAGATTAAAGAACTAGGA
Product: plasmid recombination enzyme
Products: NA
Alternate protein names: ORF 1 [H]
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MEITGRLYAIFRVGEKKYKTIGSIAGYQRHMEREQYTPNANTNTANLRLIGSNFIMADVKEYIEGIKLRKNGVIARDLLL TASPAFFRDLSIQEKEKWVNTNIEFLEKHFGENCVYAMLHRDETTWHISAMIVPRFWDEKRKRYVLANSRYFDGKKKLSE WQDEYSSFIKQQFKELNRGQRGSKAHHVKISNFYRILNSELDSYNALEVIKKSKQSIALKEQLENVQSTLNKYKDYAKLT TLEKQELLNNLKDIKQDKVVFKETIKAMSEIYKISQQSIAKIIDSVDKNLQRGGDSDNERRV
Sequences:
>Translated_302_residues MEITGRLYAIFRVGEKKYKTIGSIAGYQRHMEREQYTPNANTNTANLRLIGSNFIMADVKEYIEGIKLRKNGVIARDLLL TASPAFFRDLSIQEKEKWVNTNIEFLEKHFGENCVYAMLHRDETTWHISAMIVPRFWDEKRKRYVLANSRYFDGKKKLSE WQDEYSSFIKQQFKELNRGQRGSKAHHVKISNFYRILNSELDSYNALEVIKKSKQSIALKEQLENVQSTLNKYKDYAKLT TLEKQELLNNLKDIKQDKVVFKETIKAMSEIYKISQQSIAKIIDSVDKNLQRGGDSDNERRV >Mature_302_residues MEITGRLYAIFRVGEKKYKTIGSIAGYQRHMEREQYTPNANTNTANLRLIGSNFIMADVKEYIEGIKLRKNGVIARDLLL TASPAFFRDLSIQEKEKWVNTNIEFLEKHFGENCVYAMLHRDETTWHISAMIVPRFWDEKRKRYVLANSRYFDGKKKLSE WQDEYSSFIKQQFKELNRGQRGSKAHHVKISNFYRILNSELDSYNALEVIKKSKQSIALKEQLENVQSTLNKYKDYAKLT TLEKQELLNNLKDIKQDKVVFKETIKAMSEIYKISQQSIAKIIDSVDKNLQRGGDSDNERRV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Toprim domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001668 - InterPro: IPR006171 - InterPro: IPR002694 [H]
Pfam domain/function: PF01076 Mob_Pre; PF01751 Toprim [H]
EC number: NA
Molecular weight: Translated: 35441; Mature: 35441
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEITGRLYAIFRVGEKKYKTIGSIAGYQRHMEREQYTPNANTNTANLRLIGSNFIMADVK CCCCHHHHEEEHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCHHHHHHH EYIEGIKLRKNGVIARDLLLTASPAFFRDLSIQEKEKWVNTNIEFLEKHFGENCVYAMLH HHHHHHHHHCCCCHHHHHHHHCCCHHHHHCCHHHHHHHHCCCHHHHHHHHCCCCEEEEEE RDETTWHISAMIVPRFWDEKRKRYVLANSRYFDGKKKLSEWQDEYSSFIKQQFKELNRGQ CCCCEEEEEEEEECHHHHHHHCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC RGSKAHHVKISNFYRILNSELDSYNALEVIKKSKQSIALKEQLENVQSTLNKYKDYAKLT CCCCCCEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLEKQELLNNLKDIKQDKVVFKETIKAMSEIYKISQQSIAKIIDSVDKNLQRGGDSDNER HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC RV CC >Mature Secondary Structure MEITGRLYAIFRVGEKKYKTIGSIAGYQRHMEREQYTPNANTNTANLRLIGSNFIMADVK CCCCHHHHEEEHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCHHHHHHH EYIEGIKLRKNGVIARDLLLTASPAFFRDLSIQEKEKWVNTNIEFLEKHFGENCVYAMLH HHHHHHHHHCCCCHHHHHHHHCCCHHHHHCCHHHHHHHHCCCHHHHHHHHCCCCEEEEEE RDETTWHISAMIVPRFWDEKRKRYVLANSRYFDGKKKLSEWQDEYSSFIKQQFKELNRGQ CCCCEEEEEEEEECHHHHHHHCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC RGSKAHHVKISNFYRILNSELDSYNALEVIKKSKQSIALKEQLENVQSTLNKYKDYAKLT CCCCCCEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLEKQELLNNLKDIKQDKVVFKETIKAMSEIYKISQQSIAKIIDSVDKNLQRGGDSDNER HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC RV CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA