Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170756917

Identifier: 170756917

GI number: 170756917

Start: 1049171

End: 1049905

Strand: Direct

Name: 170756917

Synonym: CLD_3629

Alternate gene names: NA

Gene position: 1049171-1049905 (Clockwise)

Preceding gene: 170755853

Following gene: 170756500

Centisome position: 26.51

GC content: 31.02

Gene sequence:

>735_bases
ATGAGATGGGATCAATATTTAAGATATGCTGAATTATGCAGAGAAAGAATAGGGTCATTTTCTGAATATCCGTATTGCTT
ATCAGCGATAAAAGATTTATCTAGAATAGAGTTTCATCCCAAAGTGACATATATTGTAGGTGAAAATGGGACCGGTAAAT
CAACAATACTTGAAGCTATTGCCATAGCATGTGGATTCAATCCAGAAGGTGGAACTAGAAACTTTAATTTTTCAACAAAG
GATACCCATTCAGATTTATATGAAAACCTTAAATTGGTTAGAGGAGTTAAAAGACCATACGATGGTTTTTTTCTAAGAGC
AGAAAGCTTCTATAATGTGGCTACAAATATAGATGAAATATATGAAATAGATGCTTTAGATCCATATGGAGGAGTATCAC
TACATTCACAGTCTCATGGAGAATCTTTTTTATCAGTTATTAGAAATAGATTTAGCGGAAATGGTTTATATATTTTGGAT
GAGCCAGAAGCAGCATTATCTCCATCAAGGCAAATGTCTATGCTTGTTATAATGCATGAATTAATAAAGAAAAATTCTCA
GTTTATAATAGCTACTCATTCCCCTATAATAATGTCTTATCCAGATTCAATCATTTATGAATTAAGAGATGGTATAAAAG
AAGTTATGTACAAGGATACTGAACATTATAAAATTACGAGAAATTTTCTTGATAAACCTGAAAAAATGCTAAAAGTGCTT
TTATCTGAAGAGTAA

Upstream 100 bases:

>100_bases
TAATATAAGAACTGAGAAGGTAAAACAGTAAGATATAACGTCTTGTTGCTACTAATGTTTTGTGTTTAATTGTTATATAT
CATTTGAGGAGGGGAGACAA

Downstream 100 bases:

>100_bases
ATAATATGAACAAATTCATTAATATACATAAATAAATTTGGGGGTGTAGATATGAATAACTATATTATCAGAGAAAGTAA
TAGTGAGGAGGAGGCAGATT

Product: hypothetical protein

Products: NA

Alternate protein names: SMC Domain-Containing Protein; ABC Transporter; SMC Domain Protein; ATPase; Aaa ATPase; RecF/RecN/SMC; SMC Protein-Like Protein; ABC Transport System ATPase Component; ABC-Type Antimicrobial Peptide Transport System Protein; LOW QUALITY PROTEIN ABC Transporter

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MRWDQYLRYAELCRERIGSFSEYPYCLSAIKDLSRIEFHPKVTYIVGENGTGKSTILEAIAIACGFNPEGGTRNFNFSTK
DTHSDLYENLKLVRGVKRPYDGFFLRAESFYNVATNIDEIYEIDALDPYGGVSLHSQSHGESFLSVIRNRFSGNGLYILD
EPEAALSPSRQMSMLVIMHELIKKNSQFIIATHSPIIMSYPDSIIYELRDGIKEVMYKDTEHYKITRNFLDKPEKMLKVL
LSEE

Sequences:

>Translated_244_residues
MRWDQYLRYAELCRERIGSFSEYPYCLSAIKDLSRIEFHPKVTYIVGENGTGKSTILEAIAIACGFNPEGGTRNFNFSTK
DTHSDLYENLKLVRGVKRPYDGFFLRAESFYNVATNIDEIYEIDALDPYGGVSLHSQSHGESFLSVIRNRFSGNGLYILD
EPEAALSPSRQMSMLVIMHELIKKNSQFIIATHSPIIMSYPDSIIYELRDGIKEVMYKDTEHYKITRNFLDKPEKMLKVL
LSEE
>Mature_244_residues
MRWDQYLRYAELCRERIGSFSEYPYCLSAIKDLSRIEFHPKVTYIVGENGTGKSTILEAIAIACGFNPEGGTRNFNFSTK
DTHSDLYENLKLVRGVKRPYDGFFLRAESFYNVATNIDEIYEIDALDPYGGVSLHSQSHGESFLSVIRNRFSGNGLYILD
EPEAALSPSRQMSMLVIMHELIKKNSQFIIATHSPIIMSYPDSIIYELRDGIKEVMYKDTEHYKITRNFLDKPEKMLKVL
LSEE

Specific function: Unknown

COG id: COG3910

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28068; Mature: 28068

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWDQYLRYAELCRERIGSFSEYPYCLSAIKDLSRIEFHPKVTYIVGENGTGKSTILEAI
CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHH
AIACGFNPEGGTRNFNFSTKDTHSDLYENLKLVRGVKRPYDGFFLRAESFYNVATNIDEI
HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHCCHHHH
YEIDALDPYGGVSLHSQSHGESFLSVIRNRFSGNGLYILDEPEAALSPSRQMSMLVIMHE
HEECCCCCCCCEEECCCCCHHHHHHHHHHHCCCCCEEEEECCHHHHCCHHHHHHHHHHHH
LIKKNSQFIIATHSPIIMSYPDSIIYELRDGIKEVMYKDTEHYKITRNFLDKPEKMLKVL
HHHCCCCEEEEECCCEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHH
LSEE
HCCC
>Mature Secondary Structure
MRWDQYLRYAELCRERIGSFSEYPYCLSAIKDLSRIEFHPKVTYIVGENGTGKSTILEAI
CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHH
AIACGFNPEGGTRNFNFSTKDTHSDLYENLKLVRGVKRPYDGFFLRAESFYNVATNIDEI
HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHCCHHHH
YEIDALDPYGGVSLHSQSHGESFLSVIRNRFSGNGLYILDEPEAALSPSRQMSMLVIMHE
HEECCCCCCCCEEECCCCCHHHHHHHHHHHCCCCCEEEEECCHHHHCCHHHHHHHHHHHH
LIKKNSQFIIATHSPIIMSYPDSIIYELRDGIKEVMYKDTEHYKITRNFLDKPEKMLKVL
HHHCCCCEEEEECCCEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHH
LSEE
HCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA