| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756902
Identifier: 170756902
GI number: 170756902
Start: 547573
End: 547971
Strand: Direct
Name: 170756902
Synonym: CLD_0311
Alternate gene names: NA
Gene position: 547573-547971 (Clockwise)
Preceding gene: 170756885
Following gene: 170756688
Centisome position: 13.83
GC content: 36.34
Gene sequence:
>399_bases ATGATTAAGGAAAAGGTGCTTGATCTTGCAAATCACATAAGTAATAAGAAGCGTGGCTCAAAAAATGAAATTAAAGCCAC GGATCCAGAGTATATGATTCTCGAGCTTGTTGTTACAAATGAAATGGCGGAAGTAGCACTTTGTATGGAGATACGTAAAA AAGTTACAGCTAAGGAAATTGCGCCTTTATGCGGTAAAGCTCTAGAGGAAACAACAAAACGCTTACTAGAATTAGCAGAG GCAGGGGTTTGTTTTGTAAATCAAGTTGACGGCATAGATATATTTTGGTATGACACCTGGGTTCCCGGTATTATGGAGAT GATGGTTAATAATAAAAAGAATGTTAAAAAATATCCTCAAATTGCTAGAGCTTTTGAAGCTTATGGAAGAGTAAGATGA
Upstream 100 bases:
>100_bases AATATTACTAAGGAGGCTTTTTATTTTTATAATCTATTGTAAACACTAGTGTTTATGCATTTTATGGTTTACGCACAATT ATTTTTGGGGGGAATAATAT
Downstream 100 bases:
>100_bases CCTAAAACTGCAGGTAGCTTCCCAGTTGGTGTAGGACTTATGCGTGTTATTCCTATAGAACATGCTATTTCAGGAGAAAC TAGAAGAGCAAGCTATGAGG
Product: pyridine nucleotide-disulphide oxidoreductase family protein
Products: NA
Alternate protein names: FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; FAD-Dependent Pyridine Nucleotide-Disulphide Oxidoreductase
Number of amino acids: Translated: 132; Mature: 132
Protein sequence:
>132_residues MIKEKVLDLANHISNKKRGSKNEIKATDPEYMILELVVTNEMAEVALCMEIRKKVTAKEIAPLCGKALEETTKRLLELAE AGVCFVNQVDGIDIFWYDTWVPGIMEMMVNNKKNVKKYPQIARAFEAYGRVR
Sequences:
>Translated_132_residues MIKEKVLDLANHISNKKRGSKNEIKATDPEYMILELVVTNEMAEVALCMEIRKKVTAKEIAPLCGKALEETTKRLLELAE AGVCFVNQVDGIDIFWYDTWVPGIMEMMVNNKKNVKKYPQIARAFEAYGRVR >Mature_132_residues MIKEKVLDLANHISNKKRGSKNEIKATDPEYMILELVVTNEMAEVALCMEIRKKVTAKEIAPLCGKALEETTKRLLELAE AGVCFVNQVDGIDIFWYDTWVPGIMEMMVNNKKNVKKYPQIARAFEAYGRVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15079; Mature: 15079
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKEKVLDLANHISNKKRGSKNEIKATDPEYMILELVVTNEMAEVALCMEIRKKVTAKEI CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH APLCGKALEETTKRLLELAEAGVCFVNQVDGIDIFWYDTWVPGIMEMMVNNKKNVKKYPQ HHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEEHHHHHHHHHHHHCCCCCHHHHHH IARAFEAYGRVR HHHHHHHHCCCC >Mature Secondary Structure MIKEKVLDLANHISNKKRGSKNEIKATDPEYMILELVVTNEMAEVALCMEIRKKVTAKEI CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH APLCGKALEETTKRLLELAEAGVCFVNQVDGIDIFWYDTWVPGIMEMMVNNKKNVKKYPQ HHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEEHHHHHHHHHHHHCCCCCHHHHHH IARAFEAYGRVR HHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA