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The map label for this gene is aldR [H]

Identifier: 170756816

GI number: 170756816

Start: 2099888

End: 2100256

Strand: Reverse

Name: aldR [H]

Synonym: CLD_2663

Alternate gene names: 170756816

Gene position: 2100256-2099888 (Counterclockwise)

Preceding gene: 170755826

Following gene: 170757456

Centisome position: 53.06

GC content: 39.57

Gene sequence:

>369_bases
ATGAAAATTATTGAAACAATAAAAGCGCCAGGAGCTATTGGACCATACTCTCAGGGATATGAAGTAAACGGGATTGTTTA
TACTTCCGGCCAGATACCGGTTAATCCGGAAAATGGAGAAATAGCGGAGAAAATTGCAGAACAAGCAAAACAAAGTTGCG
AAAATGTGAGTGCCATTTTAAAAGCGGCAGGCACCGGGCTTGAAAAAGTATTTAAAACCACCTGCTTTTTAGCGGATATG
GGGGATTTTGCAGATTTTAATGAGGTTTATGCAAAATATTTCGTATCAAAGCCGGCCCGCAGTTGTATAGCAGTAAAAAC
CCTTCCGAAGGGTGTATTATGTGAAATTGAAGCAATCGCTGTAAAATAA

Upstream 100 bases:

>100_bases
TGTTAAGGGGAGAGATAAATAAAGAGGGGGAGATAAATAAAATAGAAATTAGCTATTAAACAGAGAAAAAAATAAAAGAA
AAAGAAAGGAAGAAGAATAC

Downstream 100 bases:

>100_bases
GGAGGAAAAAATATGAAAATTACTGTAATTGGAAGCCATCTTTGCCCAGATACCTTAGCTGCATTAAACAAGCTTTCTGC
TGTTGAAGCAGATATTGATT

Product: putative endoribonuclease L-PSP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MKIIETIKAPGAIGPYSQGYEVNGIVYTSGQIPVNPENGEIAEKIAEQAKQSCENVSAILKAAGTGLEKVFKTTCFLADM
GDFADFNEVYAKYFVSKPARSCIAVKTLPKGVLCEIEAIAVK

Sequences:

>Translated_122_residues
MKIIETIKAPGAIGPYSQGYEVNGIVYTSGQIPVNPENGEIAEKIAEQAKQSCENVSAILKAAGTGLEKVFKTTCFLADM
GDFADFNEVYAKYFVSKPARSCIAVKTLPKGVLCEIEAIAVK
>Mature_122_residues
MKIIETIKAPGAIGPYSQGYEVNGIVYTSGQIPVNPENGEIAEKIAEQAKQSCENVSAILKAAGTGLEKVFKTTCFLADM
GDFADFNEVYAKYFVSKPARSCIAVKTLPKGVLCEIEAIAVK

Specific function: Implicated in the regulation of isoleucine biosynthesis [H]

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Homo sapiens, GI5032215, Length=123, Percent_Identity=49.5934959349593, Blast_Score=118, Evalue=9e-28,
Organism=Escherichia coli, GI87082213, Length=125, Percent_Identity=52.8, Blast_Score=133, Evalue=4e-33,
Organism=Escherichia coli, GI87082396, Length=125, Percent_Identity=50.4, Blast_Score=126, Evalue=5e-31,
Organism=Caenorhabditis elegans, GI25148896, Length=121, Percent_Identity=47.1074380165289, Blast_Score=115, Evalue=7e-27,
Organism=Caenorhabditis elegans, GI71982075, Length=121, Percent_Identity=47.1074380165289, Blast_Score=115, Evalue=8e-27,
Organism=Caenorhabditis elegans, GI71982068, Length=121, Percent_Identity=47.1074380165289, Blast_Score=115, Evalue=8e-27,
Organism=Saccharomyces cerevisiae, GI6322138, Length=120, Percent_Identity=46.6666666666667, Blast_Score=113, Evalue=9e-27,
Organism=Saccharomyces cerevisiae, GI6320899, Length=101, Percent_Identity=50.4950495049505, Blast_Score=108, Evalue=2e-25,
Organism=Drosophila melanogaster, GI19921376, Length=122, Percent_Identity=40.9836065573771, Blast_Score=91, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR006056
- InterPro:   IPR019897 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 13051; Mature: 13051

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIIETIKAPGAIGPYSQGYEVNGIVYTSGQIPVNPENGEIAEKIAEQAKQSCENVSAIL
CCHHHHHCCCCCCCCCCCCEEECEEEEECCEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
KAAGTGLEKVFKTTCFLADMGDFADFNEVYAKYFVSKPARSCIAVKTLPKGVLCEIEAIA
HHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHEEHHHCCCCCCEEEEEEEE
VK
CC
>Mature Secondary Structure
MKIIETIKAPGAIGPYSQGYEVNGIVYTSGQIPVNPENGEIAEKIAEQAKQSCENVSAIL
CCHHHHHCCCCCCCCCCCCEEECEEEEECCEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
KAAGTGLEKVFKTTCFLADMGDFADFNEVYAKYFVSKPARSCIAVKTLPKGVLCEIEAIA
HHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHEEHHHCCCCCCEEEEEEEE
VK
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9335274; 11337471 [H]