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The map label for this gene is ydaM [H]

Identifier: 170756797

GI number: 170756797

Start: 1428743

End: 1430005

Strand: Direct

Name: ydaM [H]

Synonym: CLD_3270

Alternate gene names: 170756797

Gene position: 1428743-1430005 (Clockwise)

Preceding gene: 170755710

Following gene: 170755305

Centisome position: 36.1

GC content: 26.37

Gene sequence:

>1263_bases
ATGGAAAGTTTAAATTGGGTAGATTATTTGTTCATTTTTTCTTTAGTTTCAATATGGATGCTGCTGTTTGTAAATATAAT
TTTATCTTTGGCTGGATATAGATATTATTTAAAGACTTTAAACAGTGAACTTAAAGGATTAGAGAATGAAAAATATCCTA
AGGTATCTATATTAGTACCTGCTCATAATGAGGAAAAGGTAATAGGAAGAACGGTAAAATCTATCTTGCTTTTAAATTAT
CCTAAAGATAAAATGGAGCTTATTGTTATAAATGATAATTCCTCAGATAACACTAAAGAAATACTAAAACAAATTCAGGA
AGAATACAGGTCTTATAATTTTAAAATAATAAATACAGATAATATAACAGGAGGAAGGGGTAAGTCTAATGCTTTAAATA
TAGGCTATAAACATTCAAGTGGAGACTTTATAGCCGTATATGATGCAGATAATACTCCAGATAAAAATGCATTAAAATAT
CTTATGGAAACTATAATTGAGGACGAACATTTAGGAGCAGTTATAGGAAAGTTTAGAACTAGAAATAAAGACAGAAATAT
GTTAACAAGATTTATAAATATAGAGACCTTAAGTTTTCAATGGATGTGCCAAGCAGGAAGATGGAATTTATTAAATTTAT
GTACTATACCTGGCACTAATTTTGTAGTAAGAAAGAATATAATACAAAAGCTGAATGGATGGGATCCAAAAGCTATAGCA
GAAGATACAGAGATAAGTTTTAGAATATATGAGTTAGGATATAAGATAAAATTTGTACCATACTCTGTAACTTGGGAACA
GGAGCCAGAGAATTTAAAGGTTTGGTTTAAACAAAGAACTAGATGGGCTAAAGGTAATATTTATGTACTTTTAAAATATT
TTAAAAACATGTTTAAAGGAACTAGTAAAGATATAATATTTGATATTTTTTATTTTTTTTCAGTGTACTTTTTATTTTTA
TCCTCTGTAATAATATCTGATATTTTATTTATTGTTGGTATTTTTTTAAATATAAATTTACATGTTACAGGAAATTTTAA
TGTTCTTTGGATATTAGCCTATGTGCTTTTTGTTTTAGAAGTAAGTTTAACTCTAACATTAGAAAAAGGGGAAAGCAATA
AGGAAAATTTAATACTTGTACCTATTATGTATTTTACATATTGTCAAATGTGGATGATAGTTGCCCTTAGAGGAATAATT
CAATATATTGGGGATAAATTGTTTAAAAAAGAAATTAAATGGTACAAAACAGAAAGATTTTAA

Upstream 100 bases:

>100_bases
TTATAGTTATAATGATAGTTACTTTATTTGTTACTATATTTATCATTATGTTTTTTGTATCTAAGAAAAAGGATAAAAAT
AAATTTTTAAGGTGATAAAC

Downstream 100 bases:

>100_bases
AAAGAAAAATAAAAAACACATAGAAAAATTAATAAAAGAATTATCAATTATAAAATATGAGAGTATGAAATGGAATAAAT
AATATAAAAAGAAAGGTAGG

Product: glycosyl transferase, group 2 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 420; Mature: 420

Protein sequence:

>420_residues
MESLNWVDYLFIFSLVSIWMLLFVNIILSLAGYRYYLKTLNSELKGLENEKYPKVSILVPAHNEEKVIGRTVKSILLLNY
PKDKMELIVINDNSSDNTKEILKQIQEEYRSYNFKIINTDNITGGRGKSNALNIGYKHSSGDFIAVYDADNTPDKNALKY
LMETIIEDEHLGAVIGKFRTRNKDRNMLTRFINIETLSFQWMCQAGRWNLLNLCTIPGTNFVVRKNIIQKLNGWDPKAIA
EDTEISFRIYELGYKIKFVPYSVTWEQEPENLKVWFKQRTRWAKGNIYVLLKYFKNMFKGTSKDIIFDIFYFFSVYFLFL
SSVIISDILFIVGIFLNINLHVTGNFNVLWILAYVLFVLEVSLTLTLEKGESNKENLILVPIMYFTYCQMWMIVALRGII
QYIGDKLFKKEIKWYKTERF

Sequences:

>Translated_420_residues
MESLNWVDYLFIFSLVSIWMLLFVNIILSLAGYRYYLKTLNSELKGLENEKYPKVSILVPAHNEEKVIGRTVKSILLLNY
PKDKMELIVINDNSSDNTKEILKQIQEEYRSYNFKIINTDNITGGRGKSNALNIGYKHSSGDFIAVYDADNTPDKNALKY
LMETIIEDEHLGAVIGKFRTRNKDRNMLTRFINIETLSFQWMCQAGRWNLLNLCTIPGTNFVVRKNIIQKLNGWDPKAIA
EDTEISFRIYELGYKIKFVPYSVTWEQEPENLKVWFKQRTRWAKGNIYVLLKYFKNMFKGTSKDIIFDIFYFFSVYFLFL
SSVIISDILFIVGIFLNINLHVTGNFNVLWILAYVLFVLEVSLTLTLEKGESNKENLILVPIMYFTYCQMWMIVALRGII
QYIGDKLFKKEIKWYKTERF
>Mature_420_residues
MESLNWVDYLFIFSLVSIWMLLFVNIILSLAGYRYYLKTLNSELKGLENEKYPKVSILVPAHNEEKVIGRTVKSILLLNY
PKDKMELIVINDNSSDNTKEILKQIQEEYRSYNFKIINTDNITGGRGKSNALNIGYKHSSGDFIAVYDADNTPDKNALKY
LMETIIEDEHLGAVIGKFRTRNKDRNMLTRFINIETLSFQWMCQAGRWNLLNLCTIPGTNFVVRKNIIQKLNGWDPKAIA
EDTEISFRIYELGYKIKFVPYSVTWEQEPENLKVWFKQRTRWAKGNIYVLLKYFKNMFKGTSKDIIFDIFYFFSVYFLFL
SSVIISDILFIVGIFLNINLHVTGNFNVLWILAYVLFVLEVSLTLTLEKGESNKENLILVPIMYFTYCQMWMIVALRGII
QYIGDKLFKKEIKWYKTERF

Specific function: Unknown

COG id: COG1215

COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis

Gene ontology:

Cell location: Membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787259, Length=373, Percent_Identity=24.9329758713137, Blast_Score=121, Evalue=9e-29,
Organism=Escherichia coli, GI87082284, Length=366, Percent_Identity=24.8633879781421, Blast_Score=94, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 49376; Mature: 49376

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESLNWVDYLFIFSLVSIWMLLFVNIILSLAGYRYYLKTLNSELKGLENEKYPKVSILVP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEE
AHNEEKVIGRTVKSILLLNYPKDKMELIVINDNSSDNTKEILKQIQEEYRSYNFKIINTD
CCCCCHHHHHHHHHHHEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEECC
NITGGRGKSNALNIGYKHSSGDFIAVYDADNTPDKNALKYLMETIIEDEHLGAVIGKFRT
CCCCCCCCCCEEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHC
RNKDRNMLTRFINIETLSFQWMCQAGRWNLLNLCTIPGTNFVVRKNIIQKLNGWDPKAIA
CCCCHHHHHHHEEEEEEEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCC
EDTEISFRIYELGYKIKFVPYSVTWEQEPENLKVWFKQRTRWAKGNIYVLLKYFKNMFKG
CCCCEEEEEEEECEEEEEEEEEEEECCCCCHHHHHHHHHCCCCCCCEEEHHHHHHHHHCC
TSKDIIFDIFYFFSVYFLFLSSVIISDILFIVGIFLNINLHVTGNFNVLWILAYVLFVLE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHH
VSLTLTLEKGESNKENLILVPIMYFTYCQMWMIVALRGIIQYIGDKLFKKEIKWYKTERF
HHEEEEEECCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MESLNWVDYLFIFSLVSIWMLLFVNIILSLAGYRYYLKTLNSELKGLENEKYPKVSILVP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEE
AHNEEKVIGRTVKSILLLNYPKDKMELIVINDNSSDNTKEILKQIQEEYRSYNFKIINTD
CCCCCHHHHHHHHHHHEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEECC
NITGGRGKSNALNIGYKHSSGDFIAVYDADNTPDKNALKYLMETIIEDEHLGAVIGKFRT
CCCCCCCCCCEEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHC
RNKDRNMLTRFINIETLSFQWMCQAGRWNLLNLCTIPGTNFVVRKNIIQKLNGWDPKAIA
CCCCHHHHHHHEEEEEEEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCC
EDTEISFRIYELGYKIKFVPYSVTWEQEPENLKVWFKQRTRWAKGNIYVLLKYFKNMFKG
CCCCEEEEEEEECEEEEEEEEEEEECCCCCHHHHHHHHHCCCCCCCEEEHHHHHHHHHCC
TSKDIIFDIFYFFSVYFLFLSSVIISDILFIVGIFLNINLHVTGNFNVLWILAYVLFVLE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHH
VSLTLTLEKGESNKENLILVPIMYFTYCQMWMIVALRGIIQYIGDKLFKKEIKWYKTERF
HHEEEEEECCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9341680; 9384377 [H]