| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756750
Identifier: 170756750
GI number: 170756750
Start: 114679
End: 115512
Strand: Direct
Name: 170756750
Synonym: CLD_0703
Alternate gene names: NA
Gene position: 114679-115512 (Clockwise)
Preceding gene: 170754491
Following gene: 170757557
Centisome position: 2.9
GC content: 23.14
Gene sequence:
>834_bases TTGCTCTATAATAAGAAAAAACTTGTTTTATTATTTGTAATTTTTGCTTTATCTTTTTCTGTTACAGGATGTAATAGTAT AGATAAAATGAAGTTAAAATTGGGTCTTAAAAATAATGATTTCGAATATATAAAAGAAAATAAAGTTCAAAAAATAATAA TACAAAATACTAGAGACAAAGGTTTCAGATTTGTAATTACAGATAAAAAGGCTATAAAAGAACTATATGATATTTTATCC TCAGCTAAACCAGTAAATACAAAATCTTCTTTGGAACCAGATTATATATTTGAAATGGATGAGGCTGGGAATAAAGCTTA TAAGTTTAGCTACATAGCTGGACTAGATAAAAAGGAAGCAGGAAACTTATATAGTGGAGATAAGATTTACATAGTATCTA AAAGAATAGATAATGACATAATAAAGAGTTTTTGGACTATAAGAAAACCCAAAGATTTTAAATATGTATATTACAATTCT ATAATAGAAGTACTAAAAAAGGAAAATATAAATAAAAATAATAAAGATAAGGTAGGTATAAATATTAAAGATGATGTAGA TGTTGCTAAATTTATATTATCTACTGATTTAGAAGATTTTAAAACTGACTTGAAAAATAACTTTAGTAATGTAGAACTTA TTAAAGATAATAATGCTAATCATAACATAGAAGTTAGCGTGGATACAGAAGGTTATAAATCTACTATGTATAAAGCAGTA ATCAAAATTAATAATAAGAATAAAAGAACAGAAAAAAAATATTATATTGTAGATGAGTATAAGAATAACAGATGGAATAT AAATATATATAATGAAAAGCCGGAGAACTTTTAA
Upstream 100 bases:
>100_bases GGGGAGCATTTTTGTGCATATAAGAACTAAATACACATCAGAAGAAAAGTATGTTATAATGTTGTTATATTTTAATAGAA TCGTATGGAGGTATAATTAA
Downstream 100 bases:
>100_bases TAAAAGATTCTTGTAAAACCCCATGCATTGCGTGGGGTTTTGCAAAAAATAAATTAATTATAGGATTAATTTTTAAAATT ATCTTATTTTTACCTTTTAT
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MLYNKKKLVLLFVIFALSFSVTGCNSIDKMKLKLGLKNNDFEYIKENKVQKIIIQNTRDKGFRFVITDKKAIKELYDILS SAKPVNTKSSLEPDYIFEMDEAGNKAYKFSYIAGLDKKEAGNLYSGDKIYIVSKRIDNDIIKSFWTIRKPKDFKYVYYNS IIEVLKKENINKNNKDKVGINIKDDVDVAKFILSTDLEDFKTDLKNNFSNVELIKDNNANHNIEVSVDTEGYKSTMYKAV IKINNKNKRTEKKYYIVDEYKNNRWNINIYNEKPENF
Sequences:
>Translated_277_residues MLYNKKKLVLLFVIFALSFSVTGCNSIDKMKLKLGLKNNDFEYIKENKVQKIIIQNTRDKGFRFVITDKKAIKELYDILS SAKPVNTKSSLEPDYIFEMDEAGNKAYKFSYIAGLDKKEAGNLYSGDKIYIVSKRIDNDIIKSFWTIRKPKDFKYVYYNS IIEVLKKENINKNNKDKVGINIKDDVDVAKFILSTDLEDFKTDLKNNFSNVELIKDNNANHNIEVSVDTEGYKSTMYKAV IKINNKNKRTEKKYYIVDEYKNNRWNINIYNEKPENF >Mature_277_residues MLYNKKKLVLLFVIFALSFSVTGCNSIDKMKLKLGLKNNDFEYIKENKVQKIIIQNTRDKGFRFVITDKKAIKELYDILS SAKPVNTKSSLEPDYIFEMDEAGNKAYKFSYIAGLDKKEAGNLYSGDKIYIVSKRIDNDIIKSFWTIRKPKDFKYVYYNS IIEVLKKENINKNNKDKVGINIKDDVDVAKFILSTDLEDFKTDLKNNFSNVELIKDNNANHNIEVSVDTEGYKSTMYKAV IKINNKNKRTEKKYYIVDEYKNNRWNINIYNEKPENF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32464; Mature: 32464
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYNKKKLVLLFVIFALSFSVTGCNSIDKMKLKLGLKNNDFEYIKENKVQKIIIQNTRDK CCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHCCEEEEEEECCCCC GFRFVITDKKAIKELYDILSSAKPVNTKSSLEPDYIFEMDEAGNKAYKFSYIAGLDKKEA CEEEEEECHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCHHC GNLYSGDKIYIVSKRIDNDIIKSFWTIRKPKDFKYVYYNSIIEVLKKENINKNNKDKVGI CCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHCCCCCCCCCEEEE NIKDDVDVAKFILSTDLEDFKTDLKNNFSNVELIKDNNANHNIEVSVDTEGYKSTMYKAV EECCCHHHHHHHHHCCHHHHHHHHHCCCCCEEEEECCCCCCEEEEEEECCCHHHHHEEEE IKINNKNKRTEKKYYIVDEYKNNRWNINIYNEKPENF EEECCCCCCCCEEEEEEEECCCCEEEEEEECCCCCCC >Mature Secondary Structure MLYNKKKLVLLFVIFALSFSVTGCNSIDKMKLKLGLKNNDFEYIKENKVQKIIIQNTRDK CCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHCCEEEEEEECCCCC GFRFVITDKKAIKELYDILSSAKPVNTKSSLEPDYIFEMDEAGNKAYKFSYIAGLDKKEA CEEEEEECHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCHHC GNLYSGDKIYIVSKRIDNDIIKSFWTIRKPKDFKYVYYNSIIEVLKKENINKNNKDKVGI CCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHCCCCCCCCCEEEE NIKDDVDVAKFILSTDLEDFKTDLKNNFSNVELIKDNNANHNIEVSVDTEGYKSTMYKAV EECCCHHHHHHHHHCCHHHHHHHHHCCCCCEEEEECCCCCCEEEEEEECCCHHHHHEEEE IKINNKNKRTEKKYYIVDEYKNNRWNINIYNEKPENF EEECCCCCCCCEEEEEEEECCCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA