| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756749
Identifier: 170756749
GI number: 170756749
Start: 1948288
End: 1948782
Strand: Reverse
Name: 170756749
Synonym: CLD_2814
Alternate gene names: NA
Gene position: 1948782-1948288 (Counterclockwise)
Preceding gene: 170757446
Following gene: 170754870
Centisome position: 49.23
GC content: 27.88
Gene sequence:
>495_bases ATGAAAAAGAAAATTGTAGCCTTATTATTATTTGTAGTAGCTTTATTTTCTTTTATTTTCGTGGGATGTAGCCAAAATAC AGCTACAAATGCTGATAAAAAAGAAGAAACTAAACAAGAAGATAAAAAGGATGATGCATCTAAAAAGTTTAATTACATAA AAGCAGATGAGTTAAAATCAAAAATTGAGAAAAAAGAAAAAATTATAATCTTAGATATTCAAGTAAAAGATGAATTTGCT AAACACCATATAAAAGGTGCTATAGAAACTAACGCATATCCAGCTAAAACTGATGAAGATAAAGCAAAACTTCATAAGGT AATGGACAAGCTTACATCTTCAGAAGATCCAATAGCTATTATCTGTCCAAAAGGAAAAGGTGGAGCAGAAAAAACTTATA ACTATCTGAAAGAAAAAGGAATAAAAGAAGATAGATTACTTATACTAGAAAAAGGACAAGCTGGTTGGACACATGAAGAT TTATTAGAAAAATAA
Upstream 100 bases:
>100_bases GTACTATTAAATTCCGTTATACTTATGGAATTGTTTTCATTAATAAACTAAAATAGTAATGTATTTACAGTTTATTAATT TATATAGGGGGGGTTCTAAT
Downstream 100 bases:
>100_bases AATAGTATAAAATACCACAAGGAATATATTCCTTGTGGTATTTCTATATTTTTAGATATAATATAACAAATGTTTTTAAA TAAGAATATATAAGTTTTAA
Product: putative lipoprotein
Products: NA
Alternate protein names: Lipoprotein
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MKKKIVALLLFVVALFSFIFVGCSQNTATNADKKEETKQEDKKDDASKKFNYIKADELKSKIEKKEKIIILDIQVKDEFA KHHIKGAIETNAYPAKTDEDKAKLHKVMDKLTSSEDPIAIICPKGKGGAEKTYNYLKEKGIKEDRLLILEKGQAGWTHED LLEK
Sequences:
>Translated_164_residues MKKKIVALLLFVVALFSFIFVGCSQNTATNADKKEETKQEDKKDDASKKFNYIKADELKSKIEKKEKIIILDIQVKDEFA KHHIKGAIETNAYPAKTDEDKAKLHKVMDKLTSSEDPIAIICPKGKGGAEKTYNYLKEKGIKEDRLLILEKGQAGWTHED LLEK >Mature_164_residues MKKKIVALLLFVVALFSFIFVGCSQNTATNADKKEETKQEDKKDDASKKFNYIKADELKSKIEKKEKIIILDIQVKDEFA KHHIKGAIETNAYPAKTDEDKAKLHKVMDKLTSSEDPIAIICPKGKGGAEKTYNYLKEKGIKEDRLLILEKGQAGWTHED LLEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18611; Mature: 18611
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKIVALLLFVVALFSFIFVGCSQNTATNADKKEETKQEDKKDDASKKFNYIKADELKS CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHH KIEKKEKIIILDIQVKDEFAKHHIKGAIETNAYPAKTDEDKAKLHKVMDKLTSSEDPIAI HHHHCCCEEEEEEEEHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEE ICPKGKGGAEKTYNYLKEKGIKEDRLLILEKGQAGWTHEDLLEK EECCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHCC >Mature Secondary Structure MKKKIVALLLFVVALFSFIFVGCSQNTATNADKKEETKQEDKKDDASKKFNYIKADELKS CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHH KIEKKEKIIILDIQVKDEFAKHHIKGAIETNAYPAKTDEDKAKLHKVMDKLTSSEDPIAI HHHHCCCEEEEEEEEHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEE ICPKGKGGAEKTYNYLKEKGIKEDRLLILEKGQAGWTHEDLLEK EECCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA