| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is yqfN [H]
Identifier: 170756699
GI number: 170756699
Start: 3182326
End: 3183015
Strand: Reverse
Name: yqfN [H]
Synonym: CLD_1610
Alternate gene names: 170756699
Gene position: 3183015-3182326 (Counterclockwise)
Preceding gene: 170754227
Following gene: 170754350
Centisome position: 80.42
GC content: 26.81
Gene sequence:
>690_bases ATGGAAATAAGTTTAAGACTAAAAGAAATAGCTAATATGGTAGATAAATGCCAGTCTGTAGTGGATGTAGGCACAGATCA TGCATACATTCCCATATATTTAATCAAAAATAATATTTGTAAGAGTGCTATAGCAGGAGATATAAATAAAGGTCCCTTAG ATAGAGCAAAAAACAATATTAATTCTCATAACTTACAAAATAAAATTCAGTGCAGACTAGGGCCAGGGCTTACTAAAATA CATCCTAAAGAGGTTAATGGTGCTATAATTGCAGGTATGGGTGGACATCTTATAAAAGACATATTAGAAGAATCAAAGGA AGTTTTTAAAAATTTAGATTTCTTAATATTACAACCGGTGCAAAACCCAGAGGCGTTAAGAGAATATATATATATTATGG GATATAAAATATTAAAAGAATCTTTAGTACTTGAGGACAATAGATTTTATGAAATTATAAAAATAAAATATGATGAAAAT CATAGATCTGTAGATCCTATATATTATGAAATAGGAGAATATCTTATAAATACTAAACATCCATTAATAAAGAAATTTTT ATATAACAATATTGACAAATATAAAAAAATACTACAATATATAAGAGAAGACACAGAAAGTGCATCCTTAAGAAAAGCAG AAATAAAAGAAAAAATATTTAAATTGGAGGAGCTGGTACAATGTATTTAA
Upstream 100 bases:
>100_bases AAGAATATTATATGTTTTTTTATAATATTATAATGTTATAGGATATATAAAATTTTTATTATTTAAAAAAATAAATATAA CATATATGCAGGAGTTAAAT
Downstream 100 bases:
>100_bases GTGTTAAAAACATAGAAAATATAATGGAAGAATATGCTCCTTTATATTTAAAGGAAAATTACGATAATGTAGGACTTATG GTAGGGGATTCAAAAACCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MEISLRLKEIANMVDKCQSVVDVGTDHAYIPIYLIKNNICKSAIAGDINKGPLDRAKNNINSHNLQNKIQCRLGPGLTKI HPKEVNGAIIAGMGGHLIKDILEESKEVFKNLDFLILQPVQNPEALREYIYIMGYKILKESLVLEDNRFYEIIKIKYDEN HRSVDPIYYEIGEYLINTKHPLIKKFLYNNIDKYKKILQYIREDTESASLRKAEIKEKIFKLEELVQCI
Sequences:
>Translated_229_residues MEISLRLKEIANMVDKCQSVVDVGTDHAYIPIYLIKNNICKSAIAGDINKGPLDRAKNNINSHNLQNKIQCRLGPGLTKI HPKEVNGAIIAGMGGHLIKDILEESKEVFKNLDFLILQPVQNPEALREYIYIMGYKILKESLVLEDNRFYEIIKIKYDEN HRSVDPIYYEIGEYLINTKHPLIKKFLYNNIDKYKKILQYIREDTESASLRKAEIKEKIFKLEELVQCI >Mature_229_residues MEISLRLKEIANMVDKCQSVVDVGTDHAYIPIYLIKNNICKSAIAGDINKGPLDRAKNNINSHNLQNKIQCRLGPGLTKI HPKEVNGAIIAGMGGHLIKDILEESKEVFKNLDFLILQPVQNPEALREYIYIMGYKILKESLVLEDNRFYEIIKIKYDEN HRSVDPIYYEIGEYLINTKHPLIKKFLYNNIDKYKKILQYIREDTESASLRKAEIKEKIFKLEELVQCI
Specific function: Unknown
COG id: COG2384
COG function: function code R; Predicted SAM-dependent methyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006901 [H]
Pfam domain/function: PF04816 DUF633 [H]
EC number: NA
Molecular weight: Translated: 26536; Mature: 26536
Theoretical pI: Translated: 8.28; Mature: 8.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEISLRLKEIANMVDKCQSVVDVGTDHAYIPIYLIKNNICKSAIAGDINKGPLDRAKNNI CCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHCCCCCCCHHHHHCCC NSHNLQNKIQCRLGPGLTKIHPKEVNGAIIAGMGGHLIKDILEESKEVFKNLDFLILQPV CHHCCCHHEEEEECCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCEEEECCC QNPEALREYIYIMGYKILKESLVLEDNRFYEIIKIKYDENHRSVDPIYYEIGEYLINTKH CCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCC PLIKKFLYNNIDKYKKILQYIREDTESASLRKAEIKEKIFKLEELVQCI HHHHHHHHHCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MEISLRLKEIANMVDKCQSVVDVGTDHAYIPIYLIKNNICKSAIAGDINKGPLDRAKNNI CCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHCCCCCCCHHHHHCCC NSHNLQNKIQCRLGPGLTKIHPKEVNGAIIAGMGGHLIKDILEESKEVFKNLDFLILQPV CHHCCCHHEEEEECCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCEEEECCC QNPEALREYIYIMGYKILKESLVLEDNRFYEIIKIKYDENHRSVDPIYYEIGEYLINTKH CCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCC PLIKKFLYNNIDKYKKILQYIREDTESASLRKAEIKEKIFKLEELVQCI HHHHHHHHHCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]