| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756684
Identifier: 170756684
GI number: 170756684
Start: 306297
End: 307406
Strand: Direct
Name: 170756684
Synonym: CLD_0519
Alternate gene names: NA
Gene position: 306297-307406 (Clockwise)
Preceding gene: 170757548
Following gene: 170754503
Centisome position: 7.74
GC content: 29.73
Gene sequence:
>1110_bases ATGATAAATGTTATTAAAACTGCGATTATAACCATAATAATATCATTCATATCCGGGTTACTATTAGATCATTATAAAAA TTTAGCACCCAGAATATTATGCAAAATAGGCAAAGGTATACCTATAGATATAAATAATAAAAAATTCAATGCATACATTA TAACTGTTAGAAATATATCAAGTAAAATAATTCATGATATAACTTTACATGTACAAAGCGCCCAAAGTAACTTAAAAATT ACAGATGCTAAAATAACAAAGGGCTTAAAATTTGATTCTTCAATAGAAGATAATATTTTAGATGTATGTATACCTTTTTT GAGTAAGGATGATGAGTTTTCAGTTACTGTATATGTAGAAAATCAGCATGGAGTGCATAATAAGCCTGTTGTTATAATTA GATCACCTGAAAAGTTTAAAGAAGTAAACTCCGAAGAAAAAAGAGGGATATTCTCAATATTTACCAATATACCTAAAAAT ATAAAAGAGATAATTTCTGATGCAACAAAAAAAGATGAAACAATAAATGAAGGAAATAGACAAATAACAAATAAAAACAA TAAACTTGGCAAAAATAAAAAAGTAATGATAATAGCTGCATCAGTTGTTTTAGTTGTAATTATTGGTGTTGTAGCAAGAT TTTATTTTAAAGAAAAACCTGCTGATACTAATACGAAAACACCAAGTGTAGAGACTAAGATTCCAAAACAATCTAATGAT TCAAAAGGATCAACAGATAAAACAACTAAAGGTACAGATGTAAAGTCATCAACAGATGGAAAAACTAAAAATACAGATGG AAATTCATCAACAGGTGGCTCAAGTAACAATACAGATAAAAAGCCATCAACTGGTGGAACAAATGGCAATACGAATAAGA AACCGTCAACCGATGATACGAATAAAAGTCCATCAACTGGTGATACAACCGGAAATAAGGATGGAAATTCATCAAAAGAC GGAACAACAAATGGAAAAACAGATGGAGATTCATCAAATAGTGGAACAACCAATGATGGAGATAAAAATCCATCAACTGG TGGAGGAACAACTGGAAATACAGATGAAAAGCCATCAACAGATGGGACAAAAGGAGATGCAGGTAACTAA
Upstream 100 bases:
>100_bases TAATAGAAAGCTTGGTTACAATTTTTAAGTTTGACACAAATATCTATCTACATTATAATTTAATTGGATTATAAAAAGAA TTGAGGAAGCGAGAATCAAT
Downstream 100 bases:
>100_bases TTTATCAATGTATCTTTGTAGCAAAAATAAAAAGCTTTTTATATAGGCATAGAAATATGAAGAGAAAATCATAAAAACCT CTTTTAGGGGATTATAAGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 369; Mature: 369
Protein sequence:
>369_residues MINVIKTAIITIIISFISGLLLDHYKNLAPRILCKIGKGIPIDINNKKFNAYIITVRNISSKIIHDITLHVQSAQSNLKI TDAKITKGLKFDSSIEDNILDVCIPFLSKDDEFSVTVYVENQHGVHNKPVVIIRSPEKFKEVNSEEKRGIFSIFTNIPKN IKEIISDATKKDETINEGNRQITNKNNKLGKNKKVMIIAASVVLVVIIGVVARFYFKEKPADTNTKTPSVETKIPKQSND SKGSTDKTTKGTDVKSSTDGKTKNTDGNSSTGGSSNNTDKKPSTGGTNGNTNKKPSTDDTNKSPSTGDTTGNKDGNSSKD GTTNGKTDGDSSNSGTTNDGDKNPSTGGGTTGNTDEKPSTDGTKGDAGN
Sequences:
>Translated_369_residues MINVIKTAIITIIISFISGLLLDHYKNLAPRILCKIGKGIPIDINNKKFNAYIITVRNISSKIIHDITLHVQSAQSNLKI TDAKITKGLKFDSSIEDNILDVCIPFLSKDDEFSVTVYVENQHGVHNKPVVIIRSPEKFKEVNSEEKRGIFSIFTNIPKN IKEIISDATKKDETINEGNRQITNKNNKLGKNKKVMIIAASVVLVVIIGVVARFYFKEKPADTNTKTPSVETKIPKQSND SKGSTDKTTKGTDVKSSTDGKTKNTDGNSSTGGSSNNTDKKPSTGGTNGNTNKKPSTDDTNKSPSTGDTTGNKDGNSSKD GTTNGKTDGDSSNSGTTNDGDKNPSTGGGTTGNTDEKPSTDGTKGDAGN >Mature_369_residues MINVIKTAIITIIISFISGLLLDHYKNLAPRILCKIGKGIPIDINNKKFNAYIITVRNISSKIIHDITLHVQSAQSNLKI TDAKITKGLKFDSSIEDNILDVCIPFLSKDDEFSVTVYVENQHGVHNKPVVIIRSPEKFKEVNSEEKRGIFSIFTNIPKN IKEIISDATKKDETINEGNRQITNKNNKLGKNKKVMIIAASVVLVVIIGVVARFYFKEKPADTNTKTPSVETKIPKQSND SKGSTDKTTKGTDVKSSTDGKTKNTDGNSSTGGSSNNTDKKPSTGGTNGNTNKKPSTDDTNKSPSTGDTTGNKDGNSSKD GTTNGKTDGDSSNSGTTNDGDKNPSTGGGTTGNTDEKPSTDGTKGDAGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39512; Mature: 39512
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINVIKTAIITIIISFISGLLLDHYKNLAPRILCKIGKGIPIDINNKKFNAYIITVRNIS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEEEEEEECCC SKIIHDITLHVQSAQSNLKITDAKITKGLKFDSSIEDNILDVCIPFLSKDDEFSVTVYVE HHHHHHHEEEEECCCCCCEEEHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEC NQHGVHNKPVVIIRSPEKFKEVNSEEKRGIFSIFTNIPKNIKEIISDATKKDETINEGNR CCCCCCCCCEEEEECCHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHCCCC QITNKNNKLGKNKKVMIIAASVVLVVIIGVVARFYFKEKPADTNTKTPSVETKIPKQSND EECCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC SKGSTDKTTKGTDVKSSTDGKTKNTDGNSSTGGSSNNTDKKPSTGGTNGNTNKKPSTDDT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC NKSPSTGDTTGNKDGNSSKDGTTNGKTDGDSSNSGTTNDGDKNPSTGGGTTGNTDEKPST CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DGTKGDAGN CCCCCCCCC >Mature Secondary Structure MINVIKTAIITIIISFISGLLLDHYKNLAPRILCKIGKGIPIDINNKKFNAYIITVRNIS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEEEEEEECCC SKIIHDITLHVQSAQSNLKITDAKITKGLKFDSSIEDNILDVCIPFLSKDDEFSVTVYVE HHHHHHHEEEEECCCCCCEEEHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEC NQHGVHNKPVVIIRSPEKFKEVNSEEKRGIFSIFTNIPKNIKEIISDATKKDETINEGNR CCCCCCCCCEEEEECCHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHCCCC QITNKNNKLGKNKKVMIIAASVVLVVIIGVVARFYFKEKPADTNTKTPSVETKIPKQSND EECCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC SKGSTDKTTKGTDVKSSTDGKTKNTDGNSSTGGSSNNTDKKPSTGGTNGNTNKKPSTDDT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC NKSPSTGDTTGNKDGNSSKDGTTNGKTDGDSSNSGTTNDGDKNPSTGGGTTGNTDEKPST CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DGTKGDAGN CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA