| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is glpX
Identifier: 170756632
GI number: 170756632
Start: 2795815
End: 2796789
Strand: Reverse
Name: glpX
Synonym: CLD_1949
Alternate gene names: 170756632
Gene position: 2796789-2795815 (Counterclockwise)
Preceding gene: 170755013
Following gene: 170754842
Centisome position: 70.66
GC content: 36.31
Gene sequence:
>975_bases ATGCTAAATACAGATATTGCTATGGGACTTGCTAGAGTAACAGAAGCAGCAGCGTTAAGTGCATCAAAATTTATGGGTAG AGGAGACAAAAATGCGGCGGATCAAGCAGCAGTGGATGGCATGCACAAAGCTTTTCAAATAATGCCCATAAGAGGTAAGG TTGTTATAGGAGAAGGAGAATTAGATGAGGCTCCTATGCTATATATAGGTGAAGAAGTTGGAATTGGTGCAGAGGATATG GTAGAAATGGATATAGCTGTAGATCCAGTAGATGGAACTAAACTTATAGCAAAGGGTTTAGAAAATGCTATAGCCGTGGT AGCTATGGGACCTAAAGGAAGTTTATTTCATGCACCAGATATGTATATGAAGAAAATAGCTGTAGGAGCAGGGGCTAAGG GAGCTATAGATATAAATAAATCCCCTAAAGAGAATATATTAAATGTAGCTAGAGCTCTAAATAAAGATGTAACAGAACTT ACAGTTATAGTTCAAGAAAGAGATAGACATGATTATATAGTAAAAGATGCAAGAGAAGTAGGCGCTAGAGTTAAGCTTTT TGGAGAAGGAGATGTAGCAGCAGTATTAGCCTGTGGATTTGAAGATACTGGAGTAGATATAATGATGGGAACCGGTGGAG CTCCAGAAGGTGTTATAGCAGCAGCTGCCATAAAATGTATGGGCGGTGAAATACAAGCACAACTTTGTCCAACTAGTCAA GAAGAAATAGAAAGATGTAAGACTATGGGAATAAAAGATCATGAAGCTATACTTTATATAGATGATTTAGTAAAAAGTGA TGATGTTTATTTTGCAGCTACAGCTATAACAGATTGTGATTTGTTAAAGGGAGTAGTTTACAATAGAAATGAGAAGGCTA TTACAAATTCTATAGTTATGAGATCTAAAACTGGTACTATTAGATTTGTTAAAGCTTGTCATAACTTAGCTAAAAGCGCT ATAGTAGTTGAATAA
Upstream 100 bases:
>100_bases ATATGATATGCTAATTAAGAGATTTTAATGAAATAAAAGTAAAAAATATATATAAATTATTATTTGTATACAATAAACCA TGATTTGAGGGGGAAAATAT
Downstream 100 bases:
>100_bases AATAATCTAAAAAATTAATTTAGTTCTTTAATGATCCTTATATATAAGAGTATGTATTAAACTCCATTATGGCTTAATAC ATACTCTTTTAATTTATAGA
Product: fructose 1,6-bisphosphatase II
Products: NA
Alternate protein names: FBPase class 2; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 2 [H]
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MLNTDIAMGLARVTEAAALSASKFMGRGDKNAADQAAVDGMHKAFQIMPIRGKVVIGEGELDEAPMLYIGEEVGIGAEDM VEMDIAVDPVDGTKLIAKGLENAIAVVAMGPKGSLFHAPDMYMKKIAVGAGAKGAIDINKSPKENILNVARALNKDVTEL TVIVQERDRHDYIVKDAREVGARVKLFGEGDVAAVLACGFEDTGVDIMMGTGGAPEGVIAAAAIKCMGGEIQAQLCPTSQ EEIERCKTMGIKDHEAILYIDDLVKSDDVYFAATAITDCDLLKGVVYNRNEKAITNSIVMRSKTGTIRFVKACHNLAKSA IVVE
Sequences:
>Translated_324_residues MLNTDIAMGLARVTEAAALSASKFMGRGDKNAADQAAVDGMHKAFQIMPIRGKVVIGEGELDEAPMLYIGEEVGIGAEDM VEMDIAVDPVDGTKLIAKGLENAIAVVAMGPKGSLFHAPDMYMKKIAVGAGAKGAIDINKSPKENILNVARALNKDVTEL TVIVQERDRHDYIVKDAREVGARVKLFGEGDVAAVLACGFEDTGVDIMMGTGGAPEGVIAAAAIKCMGGEIQAQLCPTSQ EEIERCKTMGIKDHEAILYIDDLVKSDDVYFAATAITDCDLLKGVVYNRNEKAITNSIVMRSKTGTIRFVKACHNLAKSA IVVE >Mature_324_residues MLNTDIAMGLARVTEAAALSASKFMGRGDKNAADQAAVDGMHKAFQIMPIRGKVVIGEGELDEAPMLYIGEEVGIGAEDM VEMDIAVDPVDGTKLIAKGLENAIAVVAMGPKGSLFHAPDMYMKKIAVGAGAKGAIDINKSPKENILNVARALNKDVTEL TVIVQERDRHDYIVKDAREVGARVKLFGEGDVAAVLACGFEDTGVDIMMGTGGAPEGVIAAAAIKCMGGEIQAQLCPTSQ EEIERCKTMGIKDHEAILYIDDLVKSDDVYFAATAITDCDLLKGVVYNRNEKAITNSIVMRSKTGTIRFVKACHNLAKSA IVVE
Specific function: Catalyzes the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate. Can functionally substitute for the FBPase class 3 (Fbp) of B.subtilis [H]
COG id: COG1494
COG function: function code G; Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FBPase class 2 family [H]
Homologues:
Organism=Escherichia coli, GI1790360, Length=330, Percent_Identity=44.5454545454545, Blast_Score=272, Evalue=2e-74, Organism=Escherichia coli, GI1789298, Length=323, Percent_Identity=42.4148606811146, Blast_Score=239, Evalue=2e-64,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004464 [H]
Pfam domain/function: PF03320 FBPase_glpX [H]
EC number: =3.1.3.11 [H]
Molecular weight: Translated: 34417; Mature: 34417
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNTDIAMGLARVTEAAALSASKFMGRGDKNAADQAAVDGMHKAFQIMPIRGKVVIGEGE CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEEEEEECCEEEECCCC LDEAPMLYIGEEVGIGAEDMVEMDIAVDPVDGTKLIAKGLENAIAVVAMGPKGSLFHAPD CCCCCEEEECCCCCCCHHHHEEEEEEECCCCCHHHHHHHHCCEEEEEEECCCCCEEECCH MYMKKIAVGAGAKGAIDINKSPKENILNVARALNKDVTELTVIVQERDRHDYIVKDAREV HHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHCCCHHHEEEEEECCCCCCHHHHHHHHC GARVKLFGEGDVAAVLACGFEDTGVDIMMGTGGAPEGVIAAAAIKCMGGEIQAQLCPTSQ CCEEEEEECCCEEEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCH EEIERCKTMGIKDHEAILYIDDLVKSDDVYFAATAITDCDLLKGVVYNRNEKAITNSIVM HHHHHHHHCCCCCCCEEEEEEHHCCCCCEEEEEEECCHHHHHHHHHCCCCCHHHHHHEEE RSKTGTIRFVKACHNLAKSAIVVE ECCCCCHHHHHHHHHHHHCCEECC >Mature Secondary Structure MLNTDIAMGLARVTEAAALSASKFMGRGDKNAADQAAVDGMHKAFQIMPIRGKVVIGEGE CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEEEEEECCEEEECCCC LDEAPMLYIGEEVGIGAEDMVEMDIAVDPVDGTKLIAKGLENAIAVVAMGPKGSLFHAPD CCCCCEEEECCCCCCCHHHHEEEEEEECCCCCHHHHHHHHCCEEEEEEECCCCCEEECCH MYMKKIAVGAGAKGAIDINKSPKENILNVARALNKDVTELTVIVQERDRHDYIVKDAREV HHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHCCCHHHEEEEEECCCCCCHHHHHHHHC GARVKLFGEGDVAAVLACGFEDTGVDIMMGTGGAPEGVIAAAAIKCMGGEIQAQLCPTSQ CCEEEEEECCCEEEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCH EEIERCKTMGIKDHEAILYIDDLVKSDDVYFAATAITDCDLLKGVVYNRNEKAITNSIVM HHHHHHHHCCCCCCCEEEEEEHHCCCCCEEEEEEECCHHHHHHHHHCCCCCHHHHHHEEE RSKTGTIRFVKACHNLAKSAIVVE ECCCCCHHHHHHHHHHHHCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8423140; 9353933; 9384377 [H]