| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
Click here to switch to the map view.
The map label for this gene is flp [H]
Identifier: 170756630
GI number: 170756630
Start: 915102
End: 916550
Strand: Direct
Name: flp [H]
Synonym: CLD_3766
Alternate gene names: 170756630
Gene position: 915102-916550 (Clockwise)
Preceding gene: 170755814
Following gene: 170754897
Centisome position: 23.12
GC content: 41.34
Gene sequence:
>1449_bases ATGAAAAAGACTATTGTTTTTGTATTAACGATACTTATATTATTCTCAGGATTCCCAACACAAGGTTGTCCGTTGTCAAA TGCGCAATCTGCGGCAATACAAGCGTTGCTGGATGATGCCTGTCGTATATCAGGTGTGCCAGGAATGTCAATTTCAATAC TTGCTGATGATGAAGTATTCTACTTTTCTTCTGGGTATGCAGATCGTGAAAAGGGACTGTCGGCAAGTGAAAATACGCTA TATGAGCTGGCTTCGGTCAGCAAAGCTTTTACGGGCATAGGTATTCTGATGATGGAAAAACAAGGACTGCTGTCAATGAC TGACCCCATCCAAAAGTATTTACCTTGGTTTACGTTAAAGCATCAGGGGAAACCCATTGATATGCAAAGTATTACACTCA ATAACTTTTTACACCATACTAGCGGCTTAACAAATGGCAGTCACAGTCAAATCATTCCACAAGGCAATACGCCAGAGATG TTGCGAAAAACCGTAGAAATGCTCGTAGATGCTGAATTGTCATTCTATCCTGGTGAGCAGTATAATTACGGAACTGTTAA TTATGACGTATTAGGTCTGGTTATTGAAATTGTGTCGGGTCAGAGCTATGAAGACTACATGAAAAAGCAAGTGTTTCAGC CGTTAGGGCTACACCAGACGTATGTTTACAAAGAAGATGCTCAAGCTACTGGACAATTGGCACAGGGCTACCGCTCTTCC TTCTTTATGACGACCCCATATGATGCACCAGATTATGCTGGGAATAAACCCGCGGGCTACATCATTTCTTGCGCTAAAGA TATGGCGCGTTGGATGGGCATACAGATGGGTATTGTTCAGGATATACCCGAAATATTCCATGAGATTATCGAGAAGTCCC ATCATGGGGACATGTCTGTTCCAGATGTCAACGGAATGTTTTATGCGGTGGGGTGGTCAGTAAATTCCGAACAAACAATT ATTGAACACTCGGGGGGCAACCCGAATTTTGCAACCGAAGTGGCAATACTGCCAAACGAACGCACAGCCGTTTGCTTGCT GACCAACGGCACAAATACCAATAGAAATTTAGTGTTAAAAATTAAGGAAATATTGGATGGTAATCTTTCTCAGTCATACG AGATAAGCGGCACACAGTTTCTTGACATCACTTTGTCGTCTGCCACAATTATTTGTTGCCTGTTGGCGGTTCTGTTCTTT CTTTTAGGATTACGGAGAAAGAAAATGAATGAGCGGCAGCCAATGACAAAAAAGAGAATAATCGTAACAATTATTTTGCT GATTGCTACGATTGTCCTGTGTATAATGTGCTTTGCCTTCGATTGGTCAACGATACTTATTTGGCAAACATATAGTGTTC TTACAGCTTTGATTTCATCGGCATTATTAACTGGAAGCATTACATGGTTTGTATACACTCACCGATATAACACCTCGCTC CGAAAATAA
Upstream 100 bases:
>100_bases ACACAAAAATTAATAACAAATGAAAATTTATTAAATTCCAATTTGATATTGAGTAATATAAATTAGAATTTAGTTTAGTA GTTGTAACTAAGGAGAATTT
Downstream 100 bases:
>100_bases TCATAATGTTAAGTAATTAAATTCCAGCTTAAGGTTCAGTAATATAAATAGTAAATTTGTTTAATACACACTTATAGTGC AATAAAATGGCATGTAAAAA
Product: beta-lactamase
Products: A Substituted Beta- Amino Acid. [C]
Alternate protein names: FmtA-like protein [H]
Number of amino acids: Translated: 482; Mature: 482
Protein sequence:
>482_residues MKKTIVFVLTILILFSGFPTQGCPLSNAQSAAIQALLDDACRISGVPGMSISILADDEVFYFSSGYADREKGLSASENTL YELASVSKAFTGIGILMMEKQGLLSMTDPIQKYLPWFTLKHQGKPIDMQSITLNNFLHHTSGLTNGSHSQIIPQGNTPEM LRKTVEMLVDAELSFYPGEQYNYGTVNYDVLGLVIEIVSGQSYEDYMKKQVFQPLGLHQTYVYKEDAQATGQLAQGYRSS FFMTTPYDAPDYAGNKPAGYIISCAKDMARWMGIQMGIVQDIPEIFHEIIEKSHHGDMSVPDVNGMFYAVGWSVNSEQTI IEHSGGNPNFATEVAILPNERTAVCLLTNGTNTNRNLVLKIKEILDGNLSQSYEISGTQFLDITLSSATIICCLLAVLFF LLGLRRKKMNERQPMTKKRIIVTIILLIATIVLCIMCFAFDWSTILIWQTYSVLTALISSALLTGSITWFVYTHRYNTSL RK
Sequences:
>Translated_482_residues MKKTIVFVLTILILFSGFPTQGCPLSNAQSAAIQALLDDACRISGVPGMSISILADDEVFYFSSGYADREKGLSASENTL YELASVSKAFTGIGILMMEKQGLLSMTDPIQKYLPWFTLKHQGKPIDMQSITLNNFLHHTSGLTNGSHSQIIPQGNTPEM LRKTVEMLVDAELSFYPGEQYNYGTVNYDVLGLVIEIVSGQSYEDYMKKQVFQPLGLHQTYVYKEDAQATGQLAQGYRSS FFMTTPYDAPDYAGNKPAGYIISCAKDMARWMGIQMGIVQDIPEIFHEIIEKSHHGDMSVPDVNGMFYAVGWSVNSEQTI IEHSGGNPNFATEVAILPNERTAVCLLTNGTNTNRNLVLKIKEILDGNLSQSYEISGTQFLDITLSSATIICCLLAVLFF LLGLRRKKMNERQPMTKKRIIVTIILLIATIVLCIMCFAFDWSTILIWQTYSVLTALISSALLTGSITWFVYTHRYNTSL RK >Mature_482_residues MKKTIVFVLTILILFSGFPTQGCPLSNAQSAAIQALLDDACRISGVPGMSISILADDEVFYFSSGYADREKGLSASENTL YELASVSKAFTGIGILMMEKQGLLSMTDPIQKYLPWFTLKHQGKPIDMQSITLNNFLHHTSGLTNGSHSQIIPQGNTPEM LRKTVEMLVDAELSFYPGEQYNYGTVNYDVLGLVIEIVSGQSYEDYMKKQVFQPLGLHQTYVYKEDAQATGQLAQGYRSS FFMTTPYDAPDYAGNKPAGYIISCAKDMARWMGIQMGIVQDIPEIFHEIIEKSHHGDMSVPDVNGMFYAVGWSVNSEQTI IEHSGGNPNFATEVAILPNERTAVCLLTNGTNTNRNLVLKIKEILDGNLSQSYEISGTQFLDITLSSATIICCLLAVLFF LLGLRRKKMNERQPMTKKRIIVTIILLIATIVLCIMCFAFDWSTILIWQTYSVLTALISSALLTGSITWFVYTHRYNTSL RK
Specific function: Its precise function is unknown. Has no penicillin- binding activity and is not involved in methicillin resistance [H]
COG id: COG1680
COG function: function code V; Beta-lactamase class C and other penicillin binding proteins
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790593, Length=361, Percent_Identity=24.6537396121884, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI87082101, Length=187, Percent_Identity=26.7379679144385, Blast_Score=79, Evalue=7e-16, Organism=Escherichia coli, GI1786574, Length=362, Percent_Identity=23.7569060773481, Blast_Score=73, Evalue=5e-14, Organism=Caenorhabditis elegans, GI115533026, Length=253, Percent_Identity=27.2727272727273, Blast_Score=78, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17550934, Length=187, Percent_Identity=27.2727272727273, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17565630, Length=198, Percent_Identity=28.7878787878788, Blast_Score=69, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001466 [H]
Pfam domain/function: PF00144 Beta-lactamase [H]
EC number: 3.5.2.6 [C]
Molecular weight: Translated: 53675; Mature: 53675
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTIVFVLTILILFSGFPTQGCPLSNAQSAAIQALLDDACRISGVPGMSISILADDEVF CCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEE YFSSGYADREKGLSASENTLYELASVSKAFTGIGILMMEKQGLLSMTDPIQKYLPWFTLK EEECCCCHHHCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHCCCEEEE HQGKPIDMQSITLNNFLHHTSGLTNGSHSQIIPQGNTPEMLRKTVEMLVDAELSFYPGEQ CCCCCCCHHHHHHHHHHHHHCCCCCCCCCEECCCCCCHHHHHHHHHHHHCCCCEECCCCC YNYGTVNYDVLGLVIEIVSGQSYEDYMKKQVFQPLGLHQTYVYKEDAQATGQLAQGYRSS CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHCC FFMTTPYDAPDYAGNKPAGYIISCAKDMARWMGIQMGIVQDIPEIFHEIIEKSHHGDMSV EEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCC PDVNGMFYAVGWSVNSEQTIIEHSGGNPNFATEVAILPNERTAVCLLTNGTNTNRNLVLK CCCCCEEEEEEECCCCCCEEEEECCCCCCCEEEEEEECCCCEEEEEEECCCCCCCEEEEE IKEILDGNLSQSYEISGTQFLDITLSSATIICCLLAVLFFLLGLRRKKMNERQPMTKKRI EHHHHCCCCCCCEECCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH IVTIILLIATIVLCIMCFAFDWSTILIWQTYSVLTALISSALLTGSITWFVYTHRYNTSL HHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCC RK CC >Mature Secondary Structure MKKTIVFVLTILILFSGFPTQGCPLSNAQSAAIQALLDDACRISGVPGMSISILADDEVF CCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEE YFSSGYADREKGLSASENTLYELASVSKAFTGIGILMMEKQGLLSMTDPIQKYLPWFTLK EEECCCCHHHCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHCCCEEEE HQGKPIDMQSITLNNFLHHTSGLTNGSHSQIIPQGNTPEMLRKTVEMLVDAELSFYPGEQ CCCCCCCHHHHHHHHHHHHHCCCCCCCCCEECCCCCCHHHHHHHHHHHHCCCCEECCCCC YNYGTVNYDVLGLVIEIVSGQSYEDYMKKQVFQPLGLHQTYVYKEDAQATGQLAQGYRSS CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHCC FFMTTPYDAPDYAGNKPAGYIISCAKDMARWMGIQMGIVQDIPEIFHEIIEKSHHGDMSV EEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCC PDVNGMFYAVGWSVNSEQTIIEHSGGNPNFATEVAILPNERTAVCLLTNGTNTNRNLVLK CCCCCEEEEEEECCCCCCEEEEECCCCCCCEEEEEEECCCCEEEEEEECCCCCCCEEEEE IKEILDGNLSQSYEISGTQFLDITLSSATIICCLLAVLFFLLGLRRKKMNERQPMTKKRI EHHHHCCCCCCCEECCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH IVTIILLIATIVLCIMCFAFDWSTILIWQTYSVLTALISSALLTGSITWFVYTHRYNTSL HHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCC RK CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: A Beta-Lactam; H2O [C]
Specific reaction: A Beta-Lactam + H2O = A Substituted Beta- Amino Acid. [C]
General reaction: Carboxylic acid amide hydrolysis [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA