| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756534
Identifier: 170756534
GI number: 170756534
Start: 463098
End: 463490
Strand: Reverse
Name: 170756534
Synonym: CLD_0375
Alternate gene names: NA
Gene position: 463490-463098 (Counterclockwise)
Preceding gene: 170755578
Following gene: 170756401
Centisome position: 11.71
GC content: 25.19
Gene sequence:
>393_bases ATGAAAAAAGGTGATAAAATTGTAATATATATAATTTCTATTCTATTAGCTTTAAGCGTAATAAGTATTATTTTCTTCAA ATTCTTTGTAAAATCTGAAAATGCTGTAGCTGTAATAAAACAGAATGGTAAAATTATAGAAAAAGTTGATTTATCTAAAG TGAAAGAAAAAAGACAATTGAAAATTAATTATAATGATAGAGATCATAAGGGTTATAATGTTATAGAGATAGATAAAGGC TCTATTAGATTTATAGATGCGGATTGTCCTGATAAGGTGTGTATAAAATCAGGTGTATTAAAAAAACCTGGTGAAACGGC TGCTTGTCTTCCTCATAAACTTATAATTACTATTGAAAAAAATGATAAAGAAGTAGACGAAGTTTCTTATTAA
Upstream 100 bases:
>100_bases TTATTTTTATATTTTAATTAGAATATATTAAAATATAAAAAAATTAATTTTTAAATTTAATAAATTTTTATTTTGTTATA AGATAATAGGTGGTGATCTA
Downstream 100 bases:
>100_bases ATTTAGGAGTAATCTATATGAAAAATAAAAATTATAATACTAGAAAAATGATTTTTTTAAGTTTGATGGTAGGTATAGCA TTAATTATATACATAATAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MKKGDKIVIYIISILLALSVISIIFFKFFVKSENAVAVIKQNGKIIEKVDLSKVKEKRQLKINYNDRDHKGYNVIEIDKG SIRFIDADCPDKVCIKSGVLKKPGETAACLPHKLIITIEKNDKEVDEVSY
Sequences:
>Translated_130_residues MKKGDKIVIYIISILLALSVISIIFFKFFVKSENAVAVIKQNGKIIEKVDLSKVKEKRQLKINYNDRDHKGYNVIEIDKG SIRFIDADCPDKVCIKSGVLKKPGETAACLPHKLIITIEKNDKEVDEVSY >Mature_130_residues MKKGDKIVIYIISILLALSVISIIFFKFFVKSENAVAVIKQNGKIIEKVDLSKVKEKRQLKINYNDRDHKGYNVIEIDKG SIRFIDADCPDKVCIKSGVLKKPGETAACLPHKLIITIEKNDKEVDEVSY
Specific function: Unknown
COG id: COG5341
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14724; Mature: 14724
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKGDKIVIYIISILLALSVISIIFFKFFVKSENAVAVIKQNGKIIEKVDLSKVKEKRQL CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEECCHHHHHCCCEE KINYNDRDHKGYNVIEIDKGSIRFIDADCPDKVCIKSGVLKKPGETAACLPHKLIITIEK EECCCCCCCCCCEEEEECCCCEEEEECCCCCHHHHHCCCCCCCCCCCCCCCEEEEEEEEC NDKEVDEVSY CCCCCCCCCC >Mature Secondary Structure MKKGDKIVIYIISILLALSVISIIFFKFFVKSENAVAVIKQNGKIIEKVDLSKVKEKRQL CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEECCHHHHHCCCEE KINYNDRDHKGYNVIEIDKGSIRFIDADCPDKVCIKSGVLKKPGETAACLPHKLIITIEK EECCCCCCCCCCEEEEECCCCEEEEECCCCCHHHHHCCCCCCCCCCCCCCCEEEEEEEEC NDKEVDEVSY CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA