Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is yvgN [H]

Identifier: 170756521

GI number: 170756521

Start: 841863

End: 842414

Strand: Direct

Name: yvgN [H]

Synonym: CLD_0042

Alternate gene names: 170756521

Gene position: 841863-842414 (Clockwise)

Preceding gene: 170757587

Following gene: 170757580

Centisome position: 21.27

GC content: 30.25

Gene sequence:

>552_bases
ATGTTTGAAAACAAATTATTTGAAAATAAATTATATGAAGGTATATATATGAAAGTAGTTACATTTAATGGAAGTCCTAA
AAAGAACGGCAATACTTATGAAGTAATAAAGGCTGTAGCAGCAGAGTTAGAAAAAGAAAATATTGAAGTAGAAATTGTCC
ATGTTGGTAATAAAGTAATGCGTGGATGTATGGATTGCGGTGGATGCAGCAGAAACATGAACGAGCGATGTGTTATGCAG
AATGATATTCAAGTTGAAGCATGGTCACCACTCATGGGTGGTAAATTATTTGATAATGAAATATTGAAGGAAATTGCGGA
TAATCATAATAAATCTATTGCTCAAATAATATTACGCTGGGATATACAAAATGGGCTTAGAAAGAAGATAATCAATGTTG
TTAAGTTATCTGCCAAGGGGGAGTTTCAGGAAGCAATTAACTGTACAAATGATTATATAAATCAGATAAAGCAAGAGAGA
AAAAATGCAAATAGTATATTGAAGCAATTAGAATTTATGAAAAATGAATTTAATACAAACTCTACACTTTAA

Upstream 100 bases:

>100_bases
ATCAGTATGTAGATATTTCAATAAATCTTACTTAAAGGTAAGTAATCTAACGAAAAAGTACGTACTTGTCACTTGTATTA
TTGAACCATATAATAAACAC

Downstream 100 bases:

>100_bases
CACCATACTTTGTGATGGTGTTATTCTTTTATCAAAAGGAGGGAATAACACATGGAAGTAATAAAAGTTCATAATCTTTA
TAAATCTTATGGGAATGTTC

Product: multimeric flavodoxin WrbA family protein

Products: NA

Alternate protein names: GR; Methylglyoxal reductase [H]

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MFENKLFENKLYEGIYMKVVTFNGSPKKNGNTYEVIKAVAAELEKENIEVEIVHVGNKVMRGCMDCGGCSRNMNERCVMQ
NDIQVEAWSPLMGGKLFDNEILKEIADNHNKSIAQIILRWDIQNGLRKKIINVVKLSAKGEFQEAINCTNDYINQIKQER
KNANSILKQLEFMKNEFNTNSTL

Sequences:

>Translated_183_residues
MFENKLFENKLYEGIYMKVVTFNGSPKKNGNTYEVIKAVAAELEKENIEVEIVHVGNKVMRGCMDCGGCSRNMNERCVMQ
NDIQVEAWSPLMGGKLFDNEILKEIADNHNKSIAQIILRWDIQNGLRKKIINVVKLSAKGEFQEAINCTNDYINQIKQER
KNANSILKQLEFMKNEFNTNSTL
>Mature_183_residues
MFENKLFENKLYEGIYMKVVTFNGSPKKNGNTYEVIKAVAAELEKENIEVEIVHVGNKVMRGCMDCGGCSRNMNERCVMQ
NDIQVEAWSPLMGGKLFDNEILKEIADNHNKSIAQIILRWDIQNGLRKKIINVVKLSAKGEFQEAINCTNDYINQIKQER
KNANSILKQLEFMKNEFNTNSTL

Specific function: Reduces glyoxal and methylglyoxal. Is not involved in the vitamin B6 biosynthesis [H]

COG id: COG0655

COG function: function code R; Multimeric flavodoxin WrbA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldo/keto reductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001395
- InterPro:   IPR018170
- InterPro:   IPR020471
- InterPro:   IPR023210 [H]

Pfam domain/function: PF00248 Aldo_ket_red [H]

EC number: =1.1.1.283 [H]

Molecular weight: Translated: 20997; Mature: 20997

Theoretical pI: Translated: 7.84; Mature: 7.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFENKLFENKLYEGIYMKVVTFNGSPKKNGNTYEVIKAVAAELEKENIEVEIVHVGNKVM
CCCCHHHHHHHHCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCHHHH
RGCMDCGGCSRNMNERCVMQNDIQVEAWSPLMGGKLFDNEILKEIADNHNKSIAQIILRW
HHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHH
DIQNGLRKKIINVVKLSAKGEFQEAINCTNDYINQIKQERKNANSILKQLEFMKNEFNTN
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
STL
CCC
>Mature Secondary Structure
MFENKLFENKLYEGIYMKVVTFNGSPKKNGNTYEVIKAVAAELEKENIEVEIVHVGNKVM
CCCCHHHHHHHHCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCHHHH
RGCMDCGGCSRNMNERCVMQNDIQVEAWSPLMGGKLFDNEILKEIADNHNKSIAQIILRW
HHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHH
DIQNGLRKKIINVVKLSAKGEFQEAINCTNDYINQIKQERKNANSILKQLEFMKNEFNTN
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
STL
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]