Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170756495

Identifier: 170756495

GI number: 170756495

Start: 705412

End: 706161

Strand: Direct

Name: 170756495

Synonym: CLD_0169

Alternate gene names: NA

Gene position: 705412-706161 (Clockwise)

Preceding gene: 170756218

Following gene: 170757481

Centisome position: 17.82

GC content: 26.4

Gene sequence:

>750_bases
ATGAATAAAATCGTTATAGGATTTGCTCTGATTATTATAGCCACTTTAACATTAACATCATGTTCTAAGAAGAATAAGAT
AAAATTTGACGATGAAATAGCCCCATATACCAAAAAAGAAACTAATGAGTTTAGTTATAAAATCAATAGTGACACAGTAA
GAATAAAAAGCAATTGTGGAAATCTAAAGATTAAAAAAGGTAATGTTGATGAAGTTAAAGTTACCATAGAAAAACTTGTT
GGTGGAAAAAGTGAGGATAAATTACAAGAAGCATTAAATTCTATTAGTTGCACTTTAGAGGATGGGACTATTAACATAAG
TTTATCTAGTAAAGACAAGTCTAACGTCAGTTCTATAAATATAGAGACCACTATAGTTATCCCTAAAAAGATTAGCTCAT
TAAATATACAAAATAATATTGGAAATATTGAGTTAGAAGGTAATTATAAAGATTTGAAGGTTCAAATGGAAAATGGAAAT
ATATCATACAAAGGAGAGTTAGAGAAATCTAATATAAGTTCTAAAGTAGGAAATATTAATTTAAATTTACAACAATTAGA
AAATAATTATCAGTACGAAATTAATGGAGAAGTTGTAAATGTAAATATTAAAGTACCAAACAAAAGTAAAATTAACCTAA
TAGGTTCTATGGCTAATAAAGTTAAAGTTAAAGATGGAGGAAATATTAGTGAAGCTGGTGCGGTATTTGATATAAATGTA
AAAACAGGCAATGCAAAGATAGAAAACTAA

Upstream 100 bases:

>100_bases
AGCTTATTTATACAATATATAAAGTTTAATTATTTTCTTAAAGCTTTACCTTAAGCTGAAACTCTATTTTTATAGCTTAG
GTTATGGAAAGGAGAAAAAA

Downstream 100 bases:

>100_bases
AAGAAGATAAGGGGGAGCGCTTATGGACTTTATAGTTAGGGAAGCAAAATTATCTGATTTAGATAATATACTGGAACTAT
GGAGAGAGTTATCTGTAGAT

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MNKIVIGFALIIIATLTLTSCSKKNKIKFDDEIAPYTKKETNEFSYKINSDTVRIKSNCGNLKIKKGNVDEVKVTIEKLV
GGKSEDKLQEALNSISCTLEDGTINISLSSKDKSNVSSINIETTIVIPKKISSLNIQNNIGNIELEGNYKDLKVQMENGN
ISYKGELEKSNISSKVGNINLNLQQLENNYQYEINGEVVNVNIKVPNKSKINLIGSMANKVKVKDGGNISEAGAVFDINV
KTGNAKIEN

Sequences:

>Translated_249_residues
MNKIVIGFALIIIATLTLTSCSKKNKIKFDDEIAPYTKKETNEFSYKINSDTVRIKSNCGNLKIKKGNVDEVKVTIEKLV
GGKSEDKLQEALNSISCTLEDGTINISLSSKDKSNVSSINIETTIVIPKKISSLNIQNNIGNIELEGNYKDLKVQMENGN
ISYKGELEKSNISSKVGNINLNLQQLENNYQYEINGEVVNVNIKVPNKSKINLIGSMANKVKVKDGGNISEAGAVFDINV
KTGNAKIEN
>Mature_249_residues
MNKIVIGFALIIIATLTLTSCSKKNKIKFDDEIAPYTKKETNEFSYKINSDTVRIKSNCGNLKIKKGNVDEVKVTIEKLV
GGKSEDKLQEALNSISCTLEDGTINISLSSKDKSNVSSINIETTIVIPKKISSLNIQNNIGNIELEGNYKDLKVQMENGN
ISYKGELEKSNISSKVGNINLNLQQLENNYQYEINGEVVNVNIKVPNKSKINLIGSMANKVKVKDGGNISEAGAVFDINV
KTGNAKIEN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27303; Mature: 27303

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKIVIGFALIIIATLTLTSCSKKNKIKFDDEIAPYTKKETNEFSYKINSDTVRIKSNCG
CCEEEHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCEEEEEECCCEEEEECCCC
NLKIKKGNVDEVKVTIEKLVGGKSEDKLQEALNSISCTLEDGTINISLSSKDKSNVSSIN
EEEEECCCCCCEEEEEEHHHCCCCHHHHHHHHHHEEEEEECCEEEEEECCCCCCCCEEEE
IETTIVIPKKISSLNIQNNIGNIELEGNYKDLKVQMENGNISYKGELEKSNISSKVGNIN
EEEEEEEECCCCEEEEECCCCEEEEECCCEEEEEEECCCCEEEECCCCCCCCCCCCCEEE
LNLQQLENNYQYEINGEVVNVNIKVPNKSKINLIGSMANKVKVKDGGNISEAGAVFDINV
EEEEECCCCCEEEECCEEEEEEEECCCCCEEEEEEECCCEEEEECCCCCCCCCEEEEEEE
KTGNAKIEN
ECCCCEECC
>Mature Secondary Structure
MNKIVIGFALIIIATLTLTSCSKKNKIKFDDEIAPYTKKETNEFSYKINSDTVRIKSNCG
CCEEEHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCEEEEEECCCEEEEECCCC
NLKIKKGNVDEVKVTIEKLVGGKSEDKLQEALNSISCTLEDGTINISLSSKDKSNVSSIN
EEEEECCCCCCEEEEEEHHHCCCCHHHHHHHHHHEEEEEECCEEEEEECCCCCCCCEEEE
IETTIVIPKKISSLNIQNNIGNIELEGNYKDLKVQMENGNISYKGELEKSNISSKVGNIN
EEEEEEEECCCCEEEEECCCCEEEEECCCEEEEEEECCCCEEEECCCCCCCCCCCCCEEE
LNLQQLENNYQYEINGEVVNVNIKVPNKSKINLIGSMANKVKVKDGGNISEAGAVFDINV
EEEEECCCCCEEEECCEEEEEEEECCCCCEEEEEEECCCEEEEECCCCCCCCCEEEEEEE
KTGNAKIEN
ECCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA