| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
Click here to switch to the map view.
The map label for this gene is 170756494
Identifier: 170756494
GI number: 170756494
Start: 2496761
End: 2497285
Strand: Reverse
Name: 170756494
Synonym: CLD_2265
Alternate gene names: NA
Gene position: 2497285-2496761 (Counterclockwise)
Preceding gene: 170755174
Following gene: 170757716
Centisome position: 63.09
GC content: 25.9
Gene sequence:
>525_bases ATGATAAAGAAAAAAAGTAAGTTTTTAACTTTTGTTTTTTCAATGTTGCCTGGTGCAGGGCATATGTATATGGGATTTAT GAATATGGGTGTATCTTTTATGTCTGTATTTTTCTTTATAATATTTCTTTCTACTTGGCTTGATATAGGACCATTATTAT TTATTTTGCCACTTATTTGGTTTTATTCCTTTTTTGATTGTACAAATAGATTAAGTTTAGATAATGAAGAATTTTTACTT TTAGAAGATAGGTATTTATTCTCTATTGATAAGTTATCAAAATTAGATAAAAGTATATTTGAAAAACGTAACCTTGCTGT CGGTGTAGTATTATTGATTTTAGGGATTTATTTAATGGCAGATAATATGATGAATATTTTATCACAATATATTCCACAAC AATTTCATTCTGTTATTCATGACTTTATGAGACAAACTCCTAAGATAATTATAGGAATAGCAATAGTTGTTATTGGCATA AGACTTATTATAGGTAAAAAAAGGGAGTGTGAAATAGATGCTTAA
Upstream 100 bases:
>100_bases ACAAATTATGTTAAACCATTGGATTTAAGTTTTATAAATTCATTTAATTCAGAGCTTAATACCTTTTCTGAAAAAATAAT TAAAATGGAGGTCTTTAATA
Downstream 100 bases:
>100_bases GGGGCGTAGGGTAGGGACATTAACTGCAGGAATTATTTTAGTTGTATTTGGGGTAATGTTTTTACTTAGATTAGTTACTG CTAATATTAATATTTCTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MIKKKSKFLTFVFSMLPGAGHMYMGFMNMGVSFMSVFFFIIFLSTWLDIGPLLFILPLIWFYSFFDCTNRLSLDNEEFLL LEDRYLFSIDKLSKLDKSIFEKRNLAVGVVLLILGIYLMADNMMNILSQYIPQQFHSVIHDFMRQTPKIIIGIAIVVIGI RLIIGKKRECEIDA
Sequences:
>Translated_174_residues MIKKKSKFLTFVFSMLPGAGHMYMGFMNMGVSFMSVFFFIIFLSTWLDIGPLLFILPLIWFYSFFDCTNRLSLDNEEFLL LEDRYLFSIDKLSKLDKSIFEKRNLAVGVVLLILGIYLMADNMMNILSQYIPQQFHSVIHDFMRQTPKIIIGIAIVVIGI RLIIGKKRECEIDA >Mature_174_residues MIKKKSKFLTFVFSMLPGAGHMYMGFMNMGVSFMSVFFFIIFLSTWLDIGPLLFILPLIWFYSFFDCTNRLSLDNEEFLL LEDRYLFSIDKLSKLDKSIFEKRNLAVGVVLLILGIYLMADNMMNILSQYIPQQFHSVIHDFMRQTPKIIIGIAIVVIGI RLIIGKKRECEIDA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20230; Mature: 20230
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 6.3 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 6.3 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKKKSKFLTFVFSMLPGAGHMYMGFMNMGVSFMSVFFFIIFLSTWLDIGPLLFILPLIW CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FYSFFDCTNRLSLDNEEFLLLEDRYLFSIDKLSKLDKSIFEKRNLAVGVVLLILGIYLMA HHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DNMMNILSQYIPQQFHSVIHDFMRQTPKIIIGIAIVVIGIRLIIGKKRECEIDA HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MIKKKSKFLTFVFSMLPGAGHMYMGFMNMGVSFMSVFFFIIFLSTWLDIGPLLFILPLIW CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FYSFFDCTNRLSLDNEEFLLLEDRYLFSIDKLSKLDKSIFEKRNLAVGVVLLILGIYLMA HHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DNMMNILSQYIPQQFHSVIHDFMRQTPKIIIGIAIVVIGIRLIIGKKRECEIDA HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA