Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is coaD

Identifier: 170756472

GI number: 170756472

Start: 2617727

End: 2618221

Strand: Reverse

Name: coaD

Synonym: CLD_2144

Alternate gene names: 170756472

Gene position: 2618221-2617727 (Counterclockwise)

Preceding gene: 170757382

Following gene: 170757282

Centisome position: 66.15

GC content: 29.29

Gene sequence:

>495_bases
ATGAAAACTGCAGTGTACCCAGGAAGTTTTGACCCTATAACTAAGGGACATTTAAATATAATTAAAAGAGCTTCTAAGGT
TTGTGATAAACTAATAGTAGCGGTACTTGTAAATCCAGAAAAGAAGGGACTTTTTTCAGTAGATGAGAGAGTAGAAATGA
TAAAAAGAGTTACTAAGAACCATAGCAATATAGAAGTGCAATGTTTTAGTGGACTTTTGATAGATTTTATGAAAGAAAAG
AAATCTAAGGTTATAATTAAAGGCCTTAGAACTATGTCAGATTTTGAATATGAATTTAAGATGGCTCTTATGAATAACAA
ATTAGATCCTAATATAGAAACAGTATTTATGATGACCAATGCAAAATATTCTTATTTAAGTTCATCCTCAGTAAAGCAGG
TAGCTATGTTTGGTGGATGTATAAAGGATTTGGTACCAGATGAAATAATACCAGATATTAAAAAAAAGATAAATCATAAA
AAGGAATGTATTTAG

Upstream 100 bases:

>100_bases
TCAGAAGAAATATATGAAGGAACTGAAAGAATAAAATTATTTGATCATAGAAAATATGGAAACACTACCGTTTGTTTTTA
TAAATTTAAGGAGGATTAAA

Downstream 100 bases:

>100_bases
GAGGGTTACTTAATGGATGTTATTAAGCTTTTAGCATATCTAGAAGAACTAATAGAATCAGGTTCAAGTATTCCTTTAAC
GGGAAAAGTTACTATAAATA

Product: phosphopantetheine adenylyltransferase

Products: NA

Alternate protein names: Dephospho-CoA pyrophosphorylase; Pantetheine-phosphate adenylyltransferase; PPAT [H]

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MKTAVYPGSFDPITKGHLNIIKRASKVCDKLIVAVLVNPEKKGLFSVDERVEMIKRVTKNHSNIEVQCFSGLLIDFMKEK
KSKVIIKGLRTMSDFEYEFKMALMNNKLDPNIETVFMMTNAKYSYLSSSSVKQVAMFGGCIKDLVPDEIIPDIKKKINHK
KECI

Sequences:

>Translated_164_residues
MKTAVYPGSFDPITKGHLNIIKRASKVCDKLIVAVLVNPEKKGLFSVDERVEMIKRVTKNHSNIEVQCFSGLLIDFMKEK
KSKVIIKGLRTMSDFEYEFKMALMNNKLDPNIETVFMMTNAKYSYLSSSSVKQVAMFGGCIKDLVPDEIIPDIKKKINHK
KECI
>Mature_164_residues
MKTAVYPGSFDPITKGHLNIIKRASKVCDKLIVAVLVNPEKKGLFSVDERVEMIKRVTKNHSNIEVQCFSGLLIDFMKEK
KSKVIIKGLRTMSDFEYEFKMALMNNKLDPNIETVFMMTNAKYSYLSSSSVKQVAMFGGCIKDLVPDEIIPDIKKKINHK
KECI

Specific function: Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate [H]

COG id: COG0669

COG function: function code H; Phosphopantetheine adenylyltransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial CoaD family [H]

Homologues:

Organism=Escherichia coli, GI1790065, Length=156, Percent_Identity=40.3846153846154, Blast_Score=150, Evalue=4e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004821
- InterPro:   IPR004820
- InterPro:   IPR001980
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01467 CTP_transf_2 [H]

EC number: =2.7.7.3 [H]

Molecular weight: Translated: 18667; Mature: 18667

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTAVYPGSFDPITKGHLNIIKRASKVCDKLIVAVLVNPEKKGLFSVDERVEMIKRVTKN
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCC
HSNIEVQCFSGLLIDFMKEKKSKVIIKGLRTMSDFEYEFKMALMNNKLDPNIETVFMMTN
CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEC
AKYSYLSSSSVKQVAMFGGCIKDLVPDEIIPDIKKKINHKKECI
CCHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHCCC
>Mature Secondary Structure
MKTAVYPGSFDPITKGHLNIIKRASKVCDKLIVAVLVNPEKKGLFSVDERVEMIKRVTKN
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCC
HSNIEVQCFSGLLIDFMKEKKSKVIIKGLRTMSDFEYEFKMALMNNKLDPNIETVFMMTN
CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEC
AKYSYLSSSSVKQVAMFGGCIKDLVPDEIIPDIKKKINHKKECI
CCHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA