| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756468
Identifier: 170756468
GI number: 170756468
Start: 1124509
End: 1125054
Strand: Direct
Name: 170756468
Synonym: CLD_3553
Alternate gene names: NA
Gene position: 1124509-1125054 (Clockwise)
Preceding gene: 170755159
Following gene: 170755633
Centisome position: 28.41
GC content: 27.47
Gene sequence:
>546_bases ATGAATTTACATTTAAAGGAATTCAATATTCCAGAGAAAATACTAAAATGGGGAGATTCTCAACCAGCACATCAGAGACA ACATATAGGAACCCATATAGATTGCTATAATCTATCAAAAATAGAGTTACCATCAGAAATGGATGTTAAGGTAATCGATG TAAGAAACTTAGATATTATAGATATTGATATACTAGATAATATATCAATTAAAGAAGATTCTTTTGTAATATTTAGAACT GGATATTTAGAGAACTATGGATACGGAAGTGAGGAGTATTTTAATTCAAAATCAAGTCCATATTTAACTAATGAGCTTGT AGATAAATTATTAAATTTCAATGTAAAATTAATAGGTATTGATTTAAGTGGAATACAGCATGGAAAACATCACGTAGCTA TAGATAAATATGTTGAAAATAAAGGAGCTTATGTGGTAGAAAATATATGTAATTTAGATAAAATTGATTCAGAATTTAAG GCAGATTTAAAGTGGTTCCAACTAGAAGGTGCTACAGCCATAAAAGTTCAGATTGAAACTTTATAA
Upstream 100 bases:
>100_bases AAAAATGTAGATAGAGAAGAACAAGAAATTGTAGCCAGTTTCTTAAAAAAATTTAATAATTTTTTAGATAAAATAATAGA ATCAGAAGGAGATGTATAAT
Downstream 100 bases:
>100_bases ATTCATTGTAATTTACTAAGATATTAGTTAGTGATAACATGAGAGAGTAATATAATAAGAAAATAATTAGATTAGATTTG AGCAAATATAGATATTTTAA
Product: putative cyclase
Products: NA
Alternate protein names: Cyclase; Polyketide Cyclase
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MNLHLKEFNIPEKILKWGDSQPAHQRQHIGTHIDCYNLSKIELPSEMDVKVIDVRNLDIIDIDILDNISIKEDSFVIFRT GYLENYGYGSEEYFNSKSSPYLTNELVDKLLNFNVKLIGIDLSGIQHGKHHVAIDKYVENKGAYVVENICNLDKIDSEFK ADLKWFQLEGATAIKVQIETL
Sequences:
>Translated_181_residues MNLHLKEFNIPEKILKWGDSQPAHQRQHIGTHIDCYNLSKIELPSEMDVKVIDVRNLDIIDIDILDNISIKEDSFVIFRT GYLENYGYGSEEYFNSKSSPYLTNELVDKLLNFNVKLIGIDLSGIQHGKHHVAIDKYVENKGAYVVENICNLDKIDSEFK ADLKWFQLEGATAIKVQIETL >Mature_181_residues MNLHLKEFNIPEKILKWGDSQPAHQRQHIGTHIDCYNLSKIELPSEMDVKVIDVRNLDIIDIDILDNISIKEDSFVIFRT GYLENYGYGSEEYFNSKSSPYLTNELVDKLLNFNVKLIGIDLSGIQHGKHHVAIDKYVENKGAYVVENICNLDKIDSEFK ADLKWFQLEGATAIKVQIETL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20813; Mature: 20813
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLHLKEFNIPEKILKWGDSQPAHQRQHIGTHIDCYNLSKIELPSEMDVKVIDVRNLDII CCCCCCCCCCHHHHHHCCCCCCCHHHHHCCCEEEEECCCEECCCCCCCEEEEEECCCCEE DIDILDNISIKEDSFVIFRTGYLENYGYGSEEYFNSKSSPYLTNELVDKLLNFNVKLIGI EEEEECCCEECCCCEEEEEECCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHCCCEEEEEE DLSGIQHGKHHVAIDKYVENKGAYVVENICNLDKIDSEFKADLKWFQLEGATAIKVQIET EECCCCCCCEEEEEEEECCCCCCEEEHHHCCCHHCCHHHHCCEEEEEECCCEEEEEEEEE L C >Mature Secondary Structure MNLHLKEFNIPEKILKWGDSQPAHQRQHIGTHIDCYNLSKIELPSEMDVKVIDVRNLDII CCCCCCCCCCHHHHHHCCCCCCCHHHHHCCCEEEEECCCEECCCCCCCEEEEEECCCCEE DIDILDNISIKEDSFVIFRTGYLENYGYGSEEYFNSKSSPYLTNELVDKLLNFNVKLIGI EEEEECCCEECCCCEEEEEECCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHCCCEEEEEE DLSGIQHGKHHVAIDKYVENKGAYVVENICNLDKIDSEFKADLKWFQLEGATAIKVQIET EECCCCCCCEEEEEEEECCCCCCEEEHHHCCCHHCCHHHHCCEEEEEECCCEEEEEEEEE L C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA