Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is bdhB [H]

Identifier: 170756420

GI number: 170756420

Start: 838313

End: 838738

Strand: Direct

Name: bdhB [H]

Synonym: CLD_0046

Alternate gene names: 170756420

Gene position: 838313-838738 (Clockwise)

Preceding gene: 170755025

Following gene: 170757195

Centisome position: 21.18

GC content: 40.61

Gene sequence:

>426_bases
TTGAGAAAAGTGGTAAGAAAAGCAATTCATGTGGGCACTATATTGACTATTGCTGCAGCAGGAAGTGAGGGATCAGGCGA
TTCTGTTATAACTCATGAAGATGGCATGTTAAAACGTGGTGCCAGCGGAGATGCTCTAAGACCTGTATTCTCCATATTAA
CCCCACGATTGACTACTACTCTATCTAACTGTCAAACAGCTTGTGGTGCTACAGACATTATGGCTCACGTATTTGAAAGA
TATTTTACAAACACTAAGGATGTTGAAATAACAGATAGGCTTTGTGAAGGGGTACTGCTCACCATGATTAAAGAAGTGCC
AAGGGTTTTAGAAAATCCTAATGACTACAATGCTAGAGCAAATATAATGTGGGCGGGAATGGTTGCTCATAATGATATTT
GTGGAGTAGGACGTGTGCAGGATTGA

Upstream 100 bases:

>100_bases
ATTTAGCAATGAATAGCACAAGTAAAATTTATATATTTATAAGTTTTATGCAACGGCTCTGTTGTTAGAAGTGGTTTGCT
TGAAAGAGTTGAAAAATCTC

Downstream 100 bases:

>100_bases
AGCAGTCACCAAATAGAGTATGAAAGGTAGCTTCCCTAACTCAATTAAGAAATACTTATAACCGTATCATTAGGACGTGA
ACATCTTGAGGTGTTCTTGT

Product: dehydrogenase domain-containing protein

Products: NA

Alternate protein names: BDH II [H]

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MRKVVRKAIHVGTILTIAAAGSEGSGDSVITHEDGMLKRGASGDALRPVFSILTPRLTTTLSNCQTACGATDIMAHVFER
YFTNTKDVEITDRLCEGVLLTMIKEVPRVLENPNDYNARANIMWAGMVAHNDICGVGRVQD

Sequences:

>Translated_141_residues
MRKVVRKAIHVGTILTIAAAGSEGSGDSVITHEDGMLKRGASGDALRPVFSILTPRLTTTLSNCQTACGATDIMAHVFER
YFTNTKDVEITDRLCEGVLLTMIKEVPRVLENPNDYNARANIMWAGMVAHNDICGVGRVQD
>Mature_141_residues
MRKVVRKAIHVGTILTIAAAGSEGSGDSVITHEDGMLKRGASGDALRPVFSILTPRLTTTLSNCQTACGATDIMAHVFER
YFTNTKDVEITDRLCEGVLLTMIKEVPRVLENPNDYNARANIMWAGMVAHNDICGVGRVQD

Specific function: Unknown

COG id: COG1979

COG function: function code C; Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the iron-containing alcohol dehydrogenase family [H]

Homologues:

Organism=Escherichia coli, GI1789386, Length=139, Percent_Identity=39.568345323741, Blast_Score=112, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001670
- InterPro:   IPR018211 [H]

Pfam domain/function: PF00465 Fe-ADH [H]

EC number: 1.1.-.- [C]

Molecular weight: Translated: 15304; Mature: 15304

Theoretical pI: Translated: 6.92; Mature: 6.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKVVRKAIHVGTILTIAAAGSEGSGDSVITHEDGMLKRGASGDALRPVFSILTPRLTTT
CHHHHHHHHHHHHHHHEEECCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHH
LSNCQTACGATDIMAHVFERYFTNTKDVEITDRLCEGVLLTMIKEVPRVLENPNDYNARA
HHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
NIMWAGMVAHNDICGVGRVQD
EEEEEEEHHCCCCCCCCCCCC
>Mature Secondary Structure
MRKVVRKAIHVGTILTIAAAGSEGSGDSVITHEDGMLKRGASGDALRPVFSILTPRLTTT
CHHHHHHHHHHHHHHHEEECCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHH
LSNCQTACGATDIMAHVFERYFTNTKDVEITDRLCEGVLLTMIKEVPRVLENPNDYNARA
HHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
NIMWAGMVAHNDICGVGRVQD
EEEEEEEHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1385386; 11466286; 1809209 [H]