Click here to switch to the map view.

The map label for this gene is ybaC [H]

Identifier: 170756409

GI number: 170756409

Start: 1003891

End: 1005237

Strand: Direct

Name: ybaC [H]

Synonym: CLD_3674

Alternate gene names: 170756409

Gene position: 1003891-1005237 (Clockwise)

Preceding gene: 170754760

Following gene: 170756846

Centisome position: 25.36

GC content: 29.7

Gene sequence:

>1347_bases
ATGGATCATAAAAAAAATAAAAAATTTTTAAATTTATTAATGCTAAAAAAATATTTGATATTTATTTTGATCATGATAAT
TATCATGGTGGTCTATGTGGTGGGAATTAGACCACATTTAAAGAATACATCAGCAATAGTTAATTTGGAATTATCTTATA
CTGGAGTTGTTCTTCTGGTTTTAGCTTTATTCTTGCTAACTTTAATTGTAACAGCGTTAATAACATTGATAATTTATATA
TTCTTTAAGAAAGGACAAACTTTTACTCCATGGATATTAAGATTAAAGTCGCTAGGAATATGGACCACAACTTTAGCAGT
AACTTTTTTAATTATAGGTATAATATCACAAAAGATATGTTTTACACCGTCTATTTTTGATAGTAATGGTAATGTGTTAG
AAGGAAGTATTGCTGAACTTAAACAAATAGATATCAATGGAAGTAAACAATGGATAACAATTAGAGGGAATAGCACTAAT
AAGCCTATACTGTTGTTCTTAGCAGGAGGACCTGGTGGAAGTCAATTAGCTGCAACTAGAATAGAGTTAAGAGAATTAGA
AAAACATTTTATTGTTGTTAATTGGGATCAACCCGGTTCAGGGAAATCATTTAATGCTGTTTCTAAAAAAGACTTAACAG
TTGAACGTTATGTAAATGACGGAGTTGAGCTTACTAAATATTTAAAAAAGAGATTTAAAAAAGATAAAATATATATAGTA
GGAGAGTCCTGGGGAAGTGCATTAGGAATACTTTTAGCTAAAGAATGTCCACAGCTATATTATGGGTTTATTGGAACAGG
ACAAATGATAAACTTTTTGGAAACTGAAAAAACAGATTATGAGTTAGCAAAGAAGTTAGCTAAGGATAGTGGAGATTTTG
ATGTTGTTGAAAAATTAGATAAACAAGGTCCGCCACCGTACTATGGAAATGACGTTACATGGAAGTCAGCTTCATATTTA
ATGTATTTAAGTAAGCAGATGTCTAAAAATTCTCAGATATTAAATAGAGGTTACAATACTCTTTCTGAGGTTGGTGCACC
TGAATATGGAATTTATGATAAGGCTAATTACTTTAGAGGAATTGTTACTACCTTTAATCACGTATATCCTCAGTTATATA
ATATAGATCTTCCAAATGATGCAGTAAAAATAGATGTACCAGTATACTTTTTTATTGGAAGACATGATATTAATGCTCCT
ACTGCTTTAGTAGAAGATTATTATAATAAATTAAAGGCATCTAGAAAAGAGTTCATTTGGTTTGAACATTCAGGACATGA
TCCCTGGAGAAATGAATCAGATAAATTTGTTCAATCAATAGTAGATATAAGTTTAAGGCAAAAGTGA

Upstream 100 bases:

>100_bases
ACCATAAATAAATGAGGCCTTTACTAAGGTTCAATTATGTCACTATATAATAGACCTCTGATATATTTTAGACTATAATT
TTATTATATGGGGGGAAATT

Downstream 100 bases:

>100_bases
ACCTCACATTTATCATTCAGCTCAGAAAATTAAAGTTATTTAATTTTTCTGGGCTATTTTAATTTCTATATATTTACCCG
ATGACTACCCGCTCTAATAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 448; Mature: 448

Protein sequence:

>448_residues
MDHKKNKKFLNLLMLKKYLIFILIMIIIMVVYVVGIRPHLKNTSAIVNLELSYTGVVLLVLALFLLTLIVTALITLIIYI
FFKKGQTFTPWILRLKSLGIWTTTLAVTFLIIGIISQKICFTPSIFDSNGNVLEGSIAELKQIDINGSKQWITIRGNSTN
KPILLFLAGGPGGSQLAATRIELRELEKHFIVVNWDQPGSGKSFNAVSKKDLTVERYVNDGVELTKYLKKRFKKDKIYIV
GESWGSALGILLAKECPQLYYGFIGTGQMINFLETEKTDYELAKKLAKDSGDFDVVEKLDKQGPPPYYGNDVTWKSASYL
MYLSKQMSKNSQILNRGYNTLSEVGAPEYGIYDKANYFRGIVTTFNHVYPQLYNIDLPNDAVKIDVPVYFFIGRHDINAP
TALVEDYYNKLKASRKEFIWFEHSGHDPWRNESDKFVQSIVDISLRQK

Sequences:

>Translated_448_residues
MDHKKNKKFLNLLMLKKYLIFILIMIIIMVVYVVGIRPHLKNTSAIVNLELSYTGVVLLVLALFLLTLIVTALITLIIYI
FFKKGQTFTPWILRLKSLGIWTTTLAVTFLIIGIISQKICFTPSIFDSNGNVLEGSIAELKQIDINGSKQWITIRGNSTN
KPILLFLAGGPGGSQLAATRIELRELEKHFIVVNWDQPGSGKSFNAVSKKDLTVERYVNDGVELTKYLKKRFKKDKIYIV
GESWGSALGILLAKECPQLYYGFIGTGQMINFLETEKTDYELAKKLAKDSGDFDVVEKLDKQGPPPYYGNDVTWKSASYL
MYLSKQMSKNSQILNRGYNTLSEVGAPEYGIYDKANYFRGIVTTFNHVYPQLYNIDLPNDAVKIDVPVYFFIGRHDINAP
TALVEDYYNKLKASRKEFIWFEHSGHDPWRNESDKFVQSIVDISLRQK
>Mature_448_residues
MDHKKNKKFLNLLMLKKYLIFILIMIIIMVVYVVGIRPHLKNTSAIVNLELSYTGVVLLVLALFLLTLIVTALITLIIYI
FFKKGQTFTPWILRLKSLGIWTTTLAVTFLIIGIISQKICFTPSIFDSNGNVLEGSIAELKQIDINGSKQWITIRGNSTN
KPILLFLAGGPGGSQLAATRIELRELEKHFIVVNWDQPGSGKSFNAVSKKDLTVERYVNDGVELTKYLKKRFKKDKIYIV
GESWGSALGILLAKECPQLYYGFIGTGQMINFLETEKTDYELAKKLAKDSGDFDVVEKLDKQGPPPYYGNDVTWKSASYL
MYLSKQMSKNSQILNRGYNTLSEVGAPEYGIYDKANYFRGIVTTFNHVYPQLYNIDLPNDAVKIDVPVYFFIGRHDINAP
TALVEDYYNKLKASRKEFIWFEHSGHDPWRNESDKFVQSIVDISLRQK

Specific function: Probable aminopeptidase [H]

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S33 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR002410 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 51010; Mature: 51010

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDHKKNKKFLNLLMLKKYLIFILIMIIIMVVYVVGIRPHLKNTSAIVNLELSYTGVVLLV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECHHHHHHHH
LALFLLTLIVTALITLIIYIFFKKGQTFTPWILRLKSLGIWTTTLAVTFLIIGIISQKIC
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHC
FTPSIFDSNGNVLEGSIAELKQIDINGSKQWITIRGNSTNKPILLFLAGGPGGSQLAATR
CCCCEECCCCCEEECCHHHHHEECCCCCEEEEEEECCCCCCCEEEEEECCCCCCCHHHHH
IELRELEKHFIVVNWDQPGSGKSFNAVSKKDLTVERYVNDGVELTKYLKKRFKKDKIYIV
HHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHCCCCEEEEE
GESWGSALGILLAKECPQLYYGFIGTGQMINFLETEKTDYELAKKLAKDSGDFDVVEKLD
ECCCCHHHHHHHHHHCCHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHH
KQGPPPYYGNDVTWKSASYLMYLSKQMSKNSQILNRGYNTLSEVGAPEYGIYDKANYFRG
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHCHHHHHHCCCCCCCCCCCHHHHHH
IVTTFNHVYPQLYNIDLPNDAVKIDVPVYFFIGRHDINAPTALVEDYYNKLKASRKEFIW
HHHHHHHHCCEEEEECCCCCCEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHCCHHHEEE
FEHSGHDPWRNESDKFVQSIVDISLRQK
EECCCCCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDHKKNKKFLNLLMLKKYLIFILIMIIIMVVYVVGIRPHLKNTSAIVNLELSYTGVVLLV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECHHHHHHHH
LALFLLTLIVTALITLIIYIFFKKGQTFTPWILRLKSLGIWTTTLAVTFLIIGIISQKIC
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHC
FTPSIFDSNGNVLEGSIAELKQIDINGSKQWITIRGNSTNKPILLFLAGGPGGSQLAATR
CCCCEECCCCCEEECCHHHHHEECCCCCEEEEEEECCCCCCCEEEEEECCCCCCCHHHHH
IELRELEKHFIVVNWDQPGSGKSFNAVSKKDLTVERYVNDGVELTKYLKKRFKKDKIYIV
HHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHCCCCEEEEE
GESWGSALGILLAKECPQLYYGFIGTGQMINFLETEKTDYELAKKLAKDSGDFDVVEKLD
ECCCCHHHHHHHHHHCCHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHH
KQGPPPYYGNDVTWKSASYLMYLSKQMSKNSQILNRGYNTLSEVGAPEYGIYDKANYFRG
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHCHHHHHHCCCCCCCCCCCHHHHHH
IVTTFNHVYPQLYNIDLPNDAVKIDVPVYFFIGRHDINAPTALVEDYYNKLKASRKEFIW
HHHHHHHHCCEEEEECCCCCCEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHCCHHHEEE
FEHSGHDPWRNESDKFVQSIVDISLRQK
EECCCCCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969501; 9384377 [H]