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The map label for this gene is ykvY [H]

Identifier: 170756405

GI number: 170756405

Start: 1149164

End: 1150354

Strand: Direct

Name: ykvY [H]

Synonym: CLD_3524

Alternate gene names: 170756405

Gene position: 1149164-1150354 (Clockwise)

Preceding gene: 170757003

Following gene: 170757255

Centisome position: 29.03

GC content: 27.62

Gene sequence:

>1191_bases
ATGAATAAAAAATTTACTTTGGAACTTACAAATAGAATAAAACACTTACAATCAAATTTAGTAAGAGAAGAGTTAGATGC
ATATATTTTAACAGCGGAAGAAAGTTTACTTTATTTTACAGGAATGTCATATAAACCAGAGGAAAGAGTGTTTTTTATGA
TTATTCCTGCAAAGGGATGTCCAATATTCCTAACTCCTAAGTTAGAAGAAAAACATCTAAGTAAAATTGAAGTTGAATGT
AAAATAATATCTTATTGGGAGGCTACATCTTATCCAGGAGAAAATTGGTATGATATTTTAGAAAACATAATGAAACCATA
TAAAAGAGTTGGAATAGAAAATACAACTAGGTATAATATTCTTGATAATATTATTGTAAATGAAATGGTAATATTGGATT
TAGTAAATGAAATGCGTAAGGTTAAAACACCATATGAAATTGAAATGATTAGAAAAACAGCTAAATTTTCAGATATAGGA
ATGGAAAGAATACTAAAGAACGCCTATATAGATGCTACAGTATTAGAAATGTTTAGTCTTTCTAATAAAATTCAACAACA
ATTAATAAAAGAGAAGGATTATGATCCAATTGTAACATCATTAACTTCTTGTGTTTGGCCATCTCCCAATAGTTCAATGC
CACATAGTATTCTAAATTTAGCAGATAAACTAGTAGAAGGATCTAATGTTGCAATGTGTTACTACAAAATTAATGGATAT
GCATCAGAATGTGAGAGGACTTTTTTCTTAAAAAAGCCTAAAAATGGGGAGATTGAACATTTTAATAATATGATGAATGC
AAGAGACATAGCTTTAAACCTTATAAAACCAGGGGTTAAATGTTCAGAAATTGATATAAAAGTGAGAGAATATCTTTTTA
AAACAGGATATAGTGATAATTTATTACATAGAACTGGTCACGGAATTGGTTTAAGTAATCATGAATTACCATTTATTTCT
ATTGGCGATGATGAAATATTAAAAGAAAATATGGTCATAAGTATTGAACCAGGTATATATATTGATGGAGTAGGTGGGTA
CAGGCATTCAGATACAATTTTAATTACAAAGGATGGTTATGAGTTACTTACTAAATTTCCAATAGATATAAATTCCCTTA
CTATTAAAAATAATAATACAGAGTCAAAGATAAAGGGAAAGCTTATAAGAAAGACCCTAAAAATTGATTAA

Upstream 100 bases:

>100_bases
ATTTATAAATAATAAAATTGACATTAATATAAAAGAATATTATACTAGATAAAAATGACCGTGGTCATAAATGTTTATGA
TATAAAAAGGAGAGAGGATA

Downstream 100 bases:

>100_bases
ACTAATATTTATATTAAGAGTATAAATAAATTTTCATTATTGAATGTAGTAAAAAATATACAATAGGCGATTGTCTATTT
CTTTAGATATCATTAGCAGA

Product: M24 family peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 396; Mature: 396

Protein sequence:

>396_residues
MNKKFTLELTNRIKHLQSNLVREELDAYILTAEESLLYFTGMSYKPEERVFFMIIPAKGCPIFLTPKLEEKHLSKIEVEC
KIISYWEATSYPGENWYDILENIMKPYKRVGIENTTRYNILDNIIVNEMVILDLVNEMRKVKTPYEIEMIRKTAKFSDIG
MERILKNAYIDATVLEMFSLSNKIQQQLIKEKDYDPIVTSLTSCVWPSPNSSMPHSILNLADKLVEGSNVAMCYYKINGY
ASECERTFFLKKPKNGEIEHFNNMMNARDIALNLIKPGVKCSEIDIKVREYLFKTGYSDNLLHRTGHGIGLSNHELPFIS
IGDDEILKENMVISIEPGIYIDGVGGYRHSDTILITKDGYELLTKFPIDINSLTIKNNNTESKIKGKLIRKTLKID

Sequences:

>Translated_396_residues
MNKKFTLELTNRIKHLQSNLVREELDAYILTAEESLLYFTGMSYKPEERVFFMIIPAKGCPIFLTPKLEEKHLSKIEVEC
KIISYWEATSYPGENWYDILENIMKPYKRVGIENTTRYNILDNIIVNEMVILDLVNEMRKVKTPYEIEMIRKTAKFSDIG
MERILKNAYIDATVLEMFSLSNKIQQQLIKEKDYDPIVTSLTSCVWPSPNSSMPHSILNLADKLVEGSNVAMCYYKINGY
ASECERTFFLKKPKNGEIEHFNNMMNARDIALNLIKPGVKCSEIDIKVREYLFKTGYSDNLLHRTGHGIGLSNHELPFIS
IGDDEILKENMVISIEPGIYIDGVGGYRHSDTILITKDGYELLTKFPIDINSLTIKNNNTESKIKGKLIRKTLKID
>Mature_396_residues
MNKKFTLELTNRIKHLQSNLVREELDAYILTAEESLLYFTGMSYKPEERVFFMIIPAKGCPIFLTPKLEEKHLSKIEVEC
KIISYWEATSYPGENWYDILENIMKPYKRVGIENTTRYNILDNIIVNEMVILDLVNEMRKVKTPYEIEMIRKTAKFSDIG
MERILKNAYIDATVLEMFSLSNKIQQQLIKEKDYDPIVTSLTSCVWPSPNSSMPHSILNLADKLVEGSNVAMCYYKINGY
ASECERTFFLKKPKNGEIEHFNNMMNARDIALNLIKPGVKCSEIDIKVREYLFKTGYSDNLLHRTGHGIGLSNHELPFIS
IGDDEILKENMVISIEPGIYIDGVGGYRHSDTILITKDGYELLTKFPIDINSLTIKNNNTESKIKGKLIRKTLKID

Specific function: Unknown

COG id: COG0006

COG function: function code E; Xaa-Pro aminopeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M24B family [H]

Homologues:

Organism=Escherichia coli, GI1788728, Length=240, Percent_Identity=32.0833333333333, Blast_Score=123, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000587
- InterPro:   IPR001714
- InterPro:   IPR000994
- InterPro:   IPR001131 [H]

Pfam domain/function: PF01321 Creatinase_N; PF00557 Peptidase_M24 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 45626; Mature: 45626

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKFTLELTNRIKHLQSNLVREELDAYILTAEESLLYFTGMSYKPEERVFFMIIPAKGC
CCCEEEEHHHHHHHHHHHHHHHHHHCEEEEEECCCEEEEECCCCCCCCCEEEEEEECCCC
PIFLTPKLEEKHLSKIEVECKIISYWEATSYPGENWYDILENIMKPYKRVGIENTTRYNI
CEEECCCCCHHCCCEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHH
LDNIIVNEMVILDLVNEMRKVKTPYEIEMIRKTAKFSDIGMERILKNAYIDATVLEMFSL
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
SNKIQQQLIKEKDYDPIVTSLTSCVWPSPNSSMPHSILNLADKLVEGSNVAMCYYKINGY
HHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCC
ASECERTFFLKKPKNGEIEHFNNMMNARDIALNLIKPGVKCSEIDIKVREYLFKTGYSDN
HHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCC
LLHRTGHGIGLSNHELPFISIGDDEILKENMVISIEPGIYIDGVGGYRHSDTILITKDGY
CHHHCCCCCCCCCCCCCEEECCCHHHHHCCCEEEECCCEEEECCCCCCCCCEEEEEECCH
ELLTKFPIDINSLTIKNNNTESKIKGKLIRKTLKID
HHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNKKFTLELTNRIKHLQSNLVREELDAYILTAEESLLYFTGMSYKPEERVFFMIIPAKGC
CCCEEEEHHHHHHHHHHHHHHHHHHCEEEEEECCCEEEEECCCCCCCCCEEEEEEECCCC
PIFLTPKLEEKHLSKIEVECKIISYWEATSYPGENWYDILENIMKPYKRVGIENTTRYNI
CEEECCCCCHHCCCEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHH
LDNIIVNEMVILDLVNEMRKVKTPYEIEMIRKTAKFSDIGMERILKNAYIDATVLEMFSL
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
SNKIQQQLIKEKDYDPIVTSLTSCVWPSPNSSMPHSILNLADKLVEGSNVAMCYYKINGY
HHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCC
ASECERTFFLKKPKNGEIEHFNNMMNARDIALNLIKPGVKCSEIDIKVREYLFKTGYSDN
HHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCC
LLHRTGHGIGLSNHELPFISIGDDEILKENMVISIEPGIYIDGVGGYRHSDTILITKDGY
CHHHCCCCCCCCCCCCCEEECCCHHHHHCCCEEEECCCEEEECCCCCCCCCEEEEEECCH
ELLTKFPIDINSLTIKNNNTESKIKGKLIRKTLKID
HHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]