| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
Click here to switch to the map view.
The map label for this gene is 170756400
Identifier: 170756400
GI number: 170756400
Start: 2848075
End: 2848443
Strand: Reverse
Name: 170756400
Synonym: CLD_1896
Alternate gene names: NA
Gene position: 2848443-2848075 (Counterclockwise)
Preceding gene: 170757234
Following gene: 170754682
Centisome position: 71.96
GC content: 25.2
Gene sequence:
>369_bases ATGAATGATTACATAGAAGTGATAAAAAAGTCTATAGAATTATCTAATGTTTTAAAGGAAGGGATAGATTATGTAAAGGA AACTATAGTTTTTAGGGAATATGGAGAGTTAGACAGTCTTTTAGATGGTCTTGTAGATTCAGTAGCATATTTAGAAAAGG CTTTAAAACCAGTTTTTTTAGAAATAAAGGATAATGAGTATGGGAAAAAAATAAAAGACTTTCAAAATAGCTTAAATATT CTTAAAGATACTTTGGATAATGGAGATATGGATGATGCTATTAGTTTTATAGAGGATAACCTTTTTGTGAAGTATGAAAT ATGGAAAAAACATTTAGATAGTAAATTAAAAAAATATACTTATTGTTAA
Upstream 100 bases:
>100_bases TTTAGCAAGGACTTTGGTTTTAATTAAAGTTCTATAAACCTATGAGTAGCTAAAGCATTTGTGGTTATATAAAAAGAAAT AATATTAAGGGAGAATTTAT
Downstream 100 bases:
>100_bases TTTTTAAAATAAATATTAAAAATCTTATAAATGTTAAAGTAATATGGATTATTTACGATAGAAAAAATATGTGTATATAT AGATTTAACCATTTTGGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 122; Mature: 122
Protein sequence:
>122_residues MNDYIEVIKKSIELSNVLKEGIDYVKETIVFREYGELDSLLDGLVDSVAYLEKALKPVFLEIKDNEYGKKIKDFQNSLNI LKDTLDNGDMDDAISFIEDNLFVKYEIWKKHLDSKLKKYTYC
Sequences:
>Translated_122_residues MNDYIEVIKKSIELSNVLKEGIDYVKETIVFREYGELDSLLDGLVDSVAYLEKALKPVFLEIKDNEYGKKIKDFQNSLNI LKDTLDNGDMDDAISFIEDNLFVKYEIWKKHLDSKLKKYTYC >Mature_122_residues MNDYIEVIKKSIELSNVLKEGIDYVKETIVFREYGELDSLLDGLVDSVAYLEKALKPVFLEIKDNEYGKKIKDFQNSLNI LKDTLDNGDMDDAISFIEDNLFVKYEIWKKHLDSKLKKYTYC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14286; Mature: 14286
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDYIEVIKKSIELSNVLKEGIDYVKETIVFREYGELDSLLDGLVDSVAYLEKALKPVFL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE EIKDNEYGKKIKDFQNSLNILKDTLDNGDMDDAISFIEDNLFVKYEIWKKHLDSKLKKYT EECCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC YC CC >Mature Secondary Structure MNDYIEVIKKSIELSNVLKEGIDYVKETIVFREYGELDSLLDGLVDSVAYLEKALKPVFL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE EIKDNEYGKKIKDFQNSLNILKDTLDNGDMDDAISFIEDNLFVKYEIWKKHLDSKLKKYT EECCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC YC CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA