Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

Click here to switch to the map view.

The map label for this gene is 170756363

Identifier: 170756363

GI number: 170756363

Start: 2647124

End: 2648458

Strand: Reverse

Name: 170756363

Synonym: CLD_2115

Alternate gene names: NA

Gene position: 2648458-2647124 (Counterclockwise)

Preceding gene: 170755213

Following gene: 170757031

Centisome position: 66.91

GC content: 27.72

Gene sequence:

>1335_bases
ATGAAAAAGGAAATACTAAAAGTAGAAAGAGGTAGCATAGCAGAGGAACTTGAAATAGAAGAGGGCGATTTTTTACTGTC
TATAAATAATAAAGAAGTTAAAGATATTATCGACTATAAATTTTTAGTTTGTGATGAATACTTAGAAGTTGAAATAAAAA
AAAATAACGGGGAAATTTGGGAACTAGAGATAGAAAAGGATTATGATGAGGATTTAGGAATAGAATTTAAAGCAGCTATA
TTAGATGTACCTCAAAGATGCCATAATAATTGCTTATTTTGTTTTATAGATCAACTACCAAAAGGTATGAGAGAAACCCT
ATATTTTAAAGATGATGATTCAAGATTATCTTTTCTTCAAGGAAATTTTCTTACTCTTACAAATATGAAGGATGAAGACA
TAGACAGAATAATAAATTATAAAATAAGTCCTATAAATATATCTGTACATACTACAAATCCAGAACTTAGGGTCAAACTT
TTAAATAATAGATTTGCAGGTAATTTATATGATAGGATGAAAAGGCTAGCCCAGGGTGGCATAAAAATGGATTGTCAGGT
AGTTTTATGTCCAGGACTTAATAATGGAGAGGAACTAAAAAGAACCATTGAAGATTTATATGCTCTTTATCCTCAGGTTG
AAAATTTAGCAGTAGTTCCAATAGGTGTTACAAAATTTAGAGAAGGATTATACCAATTTGAACTTTTTAATAAAGAAACT
GCTAATAAAGAATTAGATATGGTAGAGGAATATCAAAACAAATTTATAAAGGAAATAGGAAAACCTTTTATAAGATTATC
TGATGAATTCTATGTTATAGCAGAAAGAGAAGTGCCTAAAGAAGATTTTTATGATGGATTTAAACAATTAGAAGATGGTG
TAGGGGTTATAAGGATATTTAGAAATAATATAAAGGATAATGTAAGCAAACTTTCAACTAAATCTAAAGGTAGTTTTTCA
CTTATAACAGGACAATCTGCTTATAAAGAGATACTAGAGGCTAGTAAAATAATAAATAATCATAGTAATGATATAGATAT
AGAAGTTATAAAAATAGATAATAATTTTTTTGGAAAGACCATTACTGTAGCTGGACTTATAACTGCCAAGGATATAATAG
AACAAACACAGAAGAAAAATTTAGGAAAGTATGTTATAATTCCAGATGTAATGCTTAGAAAAGGATATGAATTAGCAGAT
ATATCCGAACAAGTTTTCTTAGATGATGTAACACTAAAAGAATTAAGCAATAGTTTAAAAAGAGAAATTTTAGTATGCGA
TTATACAGGAGAAGACTTAATAGATATAATAAATGAACATAGCAAGGAGGAATAA

Upstream 100 bases:

>100_bases
TTTTGTATTTTAAAAATTGAATTTCAAGTTGTAAATTGACTAAATTACTATATTAATGTAATATAATTTAATGATAAATA
TAAAATTTGGAGTTGAAAAA

Downstream 100 bases:

>100_bases
AAATGGGAAAACCTATAGTTGCAATAGTAGGAAGACCTAATGTAGGTAAATCTACACTATTCAATAAATTAGCAGGAAAA
AGGATAGCTATAGTACAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: FeS-Containing Oxidoreductase; FeS-Containing Cyanobacterial-Specific Oxidoreductase; PDZ Domain Protein; FeS-Containing Organism-Specific Oxidoreductase; FeS-Containing-Specific Oxidoreductase; Response Regulator Receiver Protein; PDZ Domain-Containing Protein

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MKKEILKVERGSIAEELEIEEGDFLLSINNKEVKDIIDYKFLVCDEYLEVEIKKNNGEIWELEIEKDYDEDLGIEFKAAI
LDVPQRCHNNCLFCFIDQLPKGMRETLYFKDDDSRLSFLQGNFLTLTNMKDEDIDRIINYKISPINISVHTTNPELRVKL
LNNRFAGNLYDRMKRLAQGGIKMDCQVVLCPGLNNGEELKRTIEDLYALYPQVENLAVVPIGVTKFREGLYQFELFNKET
ANKELDMVEEYQNKFIKEIGKPFIRLSDEFYVIAEREVPKEDFYDGFKQLEDGVGVIRIFRNNIKDNVSKLSTKSKGSFS
LITGQSAYKEILEASKIINNHSNDIDIEVIKIDNNFFGKTITVAGLITAKDIIEQTQKKNLGKYVIIPDVMLRKGYELAD
ISEQVFLDDVTLKELSNSLKREILVCDYTGEDLIDIINEHSKEE

Sequences:

>Translated_444_residues
MKKEILKVERGSIAEELEIEEGDFLLSINNKEVKDIIDYKFLVCDEYLEVEIKKNNGEIWELEIEKDYDEDLGIEFKAAI
LDVPQRCHNNCLFCFIDQLPKGMRETLYFKDDDSRLSFLQGNFLTLTNMKDEDIDRIINYKISPINISVHTTNPELRVKL
LNNRFAGNLYDRMKRLAQGGIKMDCQVVLCPGLNNGEELKRTIEDLYALYPQVENLAVVPIGVTKFREGLYQFELFNKET
ANKELDMVEEYQNKFIKEIGKPFIRLSDEFYVIAEREVPKEDFYDGFKQLEDGVGVIRIFRNNIKDNVSKLSTKSKGSFS
LITGQSAYKEILEASKIINNHSNDIDIEVIKIDNNFFGKTITVAGLITAKDIIEQTQKKNLGKYVIIPDVMLRKGYELAD
ISEQVFLDDVTLKELSNSLKREILVCDYTGEDLIDIINEHSKEE
>Mature_444_residues
MKKEILKVERGSIAEELEIEEGDFLLSINNKEVKDIIDYKFLVCDEYLEVEIKKNNGEIWELEIEKDYDEDLGIEFKAAI
LDVPQRCHNNCLFCFIDQLPKGMRETLYFKDDDSRLSFLQGNFLTLTNMKDEDIDRIINYKISPINISVHTTNPELRVKL
LNNRFAGNLYDRMKRLAQGGIKMDCQVVLCPGLNNGEELKRTIEDLYALYPQVENLAVVPIGVTKFREGLYQFELFNKET
ANKELDMVEEYQNKFIKEIGKPFIRLSDEFYVIAEREVPKEDFYDGFKQLEDGVGVIRIFRNNIKDNVSKLSTKSKGSFS
LITGQSAYKEILEASKIINNHSNDIDIEVIKIDNNFFGKTITVAGLITAKDIIEQTQKKNLGKYVIIPDVMLRKGYELAD
ISEQVFLDDVTLKELSNSLKREILVCDYTGEDLIDIINEHSKEE

Specific function: Unknown

COG id: COG1625

COG function: function code C; Fe-S oxidoreductase, related to NifB/MoaA family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51305; Mature: 51305

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKEILKVERGSIAEELEIEEGDFLLSINNKEVKDIIDYKFLVCDEYLEVEIKKNNGEIW
CCCHHHEECCCCCHHHCEECCCCEEEEECCCHHHHHHHHHHEEECCEEEEEEECCCCCEE
ELEIEKDYDEDLGIEFKAAILDVPQRCHNNCLFCFIDQLPKGMRETLYFKDDDSRLSFLQ
EEEECCCCCCCCCCEEEHHHHHCHHHHCCCEEEEEHHHCCCCHHHCEEEECCCCCEEEEC
GNFLTLTNMKDEDIDRIINYKISPINISVHTTNPELRVKLLNNRFAGNLYDRMKRLAQGG
CCEEEEECCCHHHHHHHHCEEEEEEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHCCC
IKMDCQVVLCPGLNNGEELKRTIEDLYALYPQVENLAVVPIGVTKFREGLYQFELFNKET
CCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHCCHHHEEEECCCC
ANKELDMVEEYQNKFIKEIGKPFIRLSDEFYVIAEREVPKEDFYDGFKQLEDGVGVIRIF
CCCHHHHHHHHHHHHHHHHCCCEEEECCCEEEEECCCCCHHHHHHHHHHHHCCCCEEHHH
RNNIKDNVSKLSTKSKGSFSLITGQSAYKEILEASKIINNHSNDIDIEVIKIDNNFFGKT
HHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCE
ITVAGLITAKDIIEQTQKKNLGKYVIIPDVMLRKGYELADISEQVFLDDVTLKELSNSLK
EEEEHHHHHHHHHHHHHHHCCCCEEEECHHHHHCCCCHHCCCHHHHCCCHHHHHHHHHHH
REILVCDYTGEDLIDIINEHSKEE
HEEEEEECCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MKKEILKVERGSIAEELEIEEGDFLLSINNKEVKDIIDYKFLVCDEYLEVEIKKNNGEIW
CCCHHHEECCCCCHHHCEECCCCEEEEECCCHHHHHHHHHHEEECCEEEEEEECCCCCEE
ELEIEKDYDEDLGIEFKAAILDVPQRCHNNCLFCFIDQLPKGMRETLYFKDDDSRLSFLQ
EEEECCCCCCCCCCEEEHHHHHCHHHHCCCEEEEEHHHCCCCHHHCEEEECCCCCEEEEC
GNFLTLTNMKDEDIDRIINYKISPINISVHTTNPELRVKLLNNRFAGNLYDRMKRLAQGG
CCEEEEECCCHHHHHHHHCEEEEEEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHCCC
IKMDCQVVLCPGLNNGEELKRTIEDLYALYPQVENLAVVPIGVTKFREGLYQFELFNKET
CCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHCCHHHEEEECCCC
ANKELDMVEEYQNKFIKEIGKPFIRLSDEFYVIAEREVPKEDFYDGFKQLEDGVGVIRIF
CCCHHHHHHHHHHHHHHHHCCCEEEECCCEEEEECCCCCHHHHHHHHHHHHCCCCEEHHH
RNNIKDNVSKLSTKSKGSFSLITGQSAYKEILEASKIINNHSNDIDIEVIKIDNNFFGKT
HHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCE
ITVAGLITAKDIIEQTQKKNLGKYVIIPDVMLRKGYELADISEQVFLDDVTLKELSNSLK
EEEEHHHHHHHHHHHHHHHCCCCEEEECHHHHHCCCCHHCCCHHHHCCCHHHHHHHHHHH
REILVCDYTGEDLIDIINEHSKEE
HEEEEEECCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA