| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756354
Identifier: 170756354
GI number: 170756354
Start: 1432799
End: 1433893
Strand: Direct
Name: 170756354
Synonym: CLD_3268
Alternate gene names: NA
Gene position: 1432799-1433893 (Clockwise)
Preceding gene: 170755305
Following gene: 170757235
Centisome position: 36.2
GC content: 25.84
Gene sequence:
>1095_bases ATGAAAAAGAATAAATTTATAATATGGTTAAGTATAATATTGATTTTTATTTATGTATTAAATTTAAATCCAATTGTTCA TGGAGAAATAAATAAAATAAAAAATGAGTTTTATGGGAAAACTTTAAATGATAAATTTGAAGTTAAAATAAAATCAGGAA ATTTATCTACAGATTATGATATAAATCAAGCATTGAAGGATATAAATAAACTAGGATTAAACACTGTAAATATACCTGTA GTTATAAATATAAAAAATTTATCCTCTAATGATATGAGTGTAGATAAAGAAAGTGAAAAAAAAGCTATAGAATTAATAAA AAGATTGAGATGGAAAAAAATAAATATAATATTAGAACCTTATCCTTGGATAGATAATGGTAATCTCTATGAAACAGAGT GGAATCCTAATAATAAAAAACAGTTCTTTGAAAATTGGCAAAATAATGTGCTTAAAGTATTAATAGATAATATAGCAGTT CCTTATCATGTGGATGCTTTAAATGTGGCTTCTAATTTTGTATATATTGAAAATGAAGAAGAACATTGGTGTAATACCAT AGACTTTGTAAGAAAATACTATAAAGGACTTGTAACCTATAGAACTTGCTGGTGGTATACAGCTCATTGGGAACCTAAAA CCAAAGAAAAATATCAGGAAAAATTAAATAATAAATTATTTTCTAAGGTAGATTTTATATCTGTAGCAGCTTACTTTGAA CTTACAGATAAAGATACTAATACAGTAGAAGAACTTGTGAAGGCCATAGATAATGTAAAGAAAAATGATAGAAGACAAAA CATAAAAGAAGAACTATATCATTTTAATGAAAAATGGCATAAACCTATTTTCTTTGGAGAGCTAGGCTTCCCTAGAAAAA GTAAAGCTGCCTCTGAGCCTTGGAATCCTATACCTTCAAACAATTCTAATAATGAGGAACAAGCTAGATGCTTTGAAGCC TATAGAAAGGTTTTTGAAAAGGAACCTTGGCTTTTAGGTTTTTCTATTTTTGCTATAGGAGATAATAGTTTTGATAAAAA CTATTATCCTTCAGAAGAAAGTATAAAAGTAATTAAAAAATGGTATAGTAAATAG
Upstream 100 bases:
>100_bases TTGGCTAATATTGAAATTCATAAGAATAAATTTTTTAAGGCATAGTCTAAGGGGGGAATTATTAAGGTTAAAAATACCTT AATATAAGAGGAGTCATTTT
Downstream 100 bases:
>100_bases TGTACATTTTATAAGGATCAAAATACATTGTAAAAATTTAAAATATTTATTTACTAAATAAAGTAATAAAACTATTGCTT ATTATTCCTATATGTGCTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 364; Mature: 364
Protein sequence:
>364_residues MKKNKFIIWLSIILIFIYVLNLNPIVHGEINKIKNEFYGKTLNDKFEVKIKSGNLSTDYDINQALKDINKLGLNTVNIPV VINIKNLSSNDMSVDKESEKKAIELIKRLRWKKINIILEPYPWIDNGNLYETEWNPNNKKQFFENWQNNVLKVLIDNIAV PYHVDALNVASNFVYIENEEEHWCNTIDFVRKYYKGLVTYRTCWWYTAHWEPKTKEKYQEKLNNKLFSKVDFISVAAYFE LTDKDTNTVEELVKAIDNVKKNDRRQNIKEELYHFNEKWHKPIFFGELGFPRKSKAASEPWNPIPSNNSNNEEQARCFEA YRKVFEKEPWLLGFSIFAIGDNSFDKNYYPSEESIKVIKKWYSK
Sequences:
>Translated_364_residues MKKNKFIIWLSIILIFIYVLNLNPIVHGEINKIKNEFYGKTLNDKFEVKIKSGNLSTDYDINQALKDINKLGLNTVNIPV VINIKNLSSNDMSVDKESEKKAIELIKRLRWKKINIILEPYPWIDNGNLYETEWNPNNKKQFFENWQNNVLKVLIDNIAV PYHVDALNVASNFVYIENEEEHWCNTIDFVRKYYKGLVTYRTCWWYTAHWEPKTKEKYQEKLNNKLFSKVDFISVAAYFE LTDKDTNTVEELVKAIDNVKKNDRRQNIKEELYHFNEKWHKPIFFGELGFPRKSKAASEPWNPIPSNNSNNEEQARCFEA YRKVFEKEPWLLGFSIFAIGDNSFDKNYYPSEESIKVIKKWYSK >Mature_364_residues MKKNKFIIWLSIILIFIYVLNLNPIVHGEINKIKNEFYGKTLNDKFEVKIKSGNLSTDYDINQALKDINKLGLNTVNIPV VINIKNLSSNDMSVDKESEKKAIELIKRLRWKKINIILEPYPWIDNGNLYETEWNPNNKKQFFENWQNNVLKVLIDNIAV PYHVDALNVASNFVYIENEEEHWCNTIDFVRKYYKGLVTYRTCWWYTAHWEPKTKEKYQEKLNNKLFSKVDFISVAAYFE LTDKDTNTVEELVKAIDNVKKNDRRQNIKEELYHFNEKWHKPIFFGELGFPRKSKAASEPWNPIPSNNSNNEEQARCFEA YRKVFEKEPWLLGFSIFAIGDNSFDKNYYPSEESIKVIKKWYSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43301; Mature: 43301
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKNKFIIWLSIILIFIYVLNLNPIVHGEINKIKNEFYGKTLNDKFEVKIKSGNLSTDYD CCCCCEEHHHHHHHHHHHHHCCCCEECCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCC INQALKDINKLGLNTVNIPVVINIKNLSSNDMSVDKESEKKAIELIKRLRWKKINIILEP HHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEECC YPWIDNGNLYETEWNPNNKKQFFENWQNNVLKVLIDNIAVPYHVDALNVASNFVYIENEE CCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHCCCEEEEECCC EHWCNTIDFVRKYYKGLVTYRTCWWYTAHWEPKTKEKYQEKLNNKLFSKVDFISVAAYFE HHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHEEEEEEE LTDKDTNTVEELVKAIDNVKKNDRRQNIKEELYHFNEKWHKPIFFGELGFPRKSKAASEP ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCC WNPIPSNNSNNEEQARCFEAYRKVFEKEPWLLGFSIFAIGDNSFDKNYYPSEESIKVIKK CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHH WYSK HHCC >Mature Secondary Structure MKKNKFIIWLSIILIFIYVLNLNPIVHGEINKIKNEFYGKTLNDKFEVKIKSGNLSTDYD CCCCCEEHHHHHHHHHHHHHCCCCEECCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCC INQALKDINKLGLNTVNIPVVINIKNLSSNDMSVDKESEKKAIELIKRLRWKKINIILEP HHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEECC YPWIDNGNLYETEWNPNNKKQFFENWQNNVLKVLIDNIAVPYHVDALNVASNFVYIENEE CCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHCCCEEEEECCC EHWCNTIDFVRKYYKGLVTYRTCWWYTAHWEPKTKEKYQEKLNNKLFSKVDFISVAAYFE HHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHEEEEEEE LTDKDTNTVEELVKAIDNVKKNDRRQNIKEELYHFNEKWHKPIFFGELGFPRKSKAASEP ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCC WNPIPSNNSNNEEQARCFEAYRKVFEKEPWLLGFSIFAIGDNSFDKNYYPSEESIKVIKK CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHH WYSK HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA