Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170756262

Identifier: 170756262

GI number: 170756262

Start: 2690523

End: 2690849

Strand: Reverse

Name: 170756262

Synonym: CLD_2063

Alternate gene names: NA

Gene position: 2690849-2690523 (Counterclockwise)

Preceding gene: 170757143

Following gene: 170756033

Centisome position: 67.98

GC content: 31.8

Gene sequence:

>327_bases
ATGGATCCAGGCAAATTTAATAAAAAAATAAAATTTGTAGTTATAGGGGATGGTACAGATGATGATGGATACCCAATAAA
AGGAGAAAAGACAATAAGAAAGTGTTATGCAAGTGTAAGAGGATTAAGGGGTAGAGAATTTTATAATGCTGCAGCAGTAC
AAGCCCAAGATGATAAAATCTTTAATTGCAGATACTTTAAGGGACTTACACCAGATATGCAAATAAAATACAATGATAAA
CTCTATAATATTACCTCTACAAATGATTTAAATGAAAAGCATGTAGAATATGAGATACATGCAAAGGAAGTGAAAGCTAG
TGGCTAG

Upstream 100 bases:

>100_bases
GAAACTACAGGTCCTAACTTTCATAAACTTAGTTTTAGCTTGGATTCTATTTTGATTCAACTAGAAGCTGAATATTTGAA
GATTAAAAGGAGTGAAGCAG

Downstream 100 bases:

>100_bases
CATGGAATTAGAAGGAATGGATAACTTAATTATAAAAATAGAAGATATGGGTAAGGCTGGAACTAGAATAGAAAACAAGG
CTTTAAAAAAAGCTGGAGAA

Product: putative phage head-tail adaptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MDPGKFNKKIKFVVIGDGTDDDGYPIKGEKTIRKCYASVRGLRGREFYNAAAVQAQDDKIFNCRYFKGLTPDMQIKYNDK
LYNITSTNDLNEKHVEYEIHAKEVKASG

Sequences:

>Translated_108_residues
MDPGKFNKKIKFVVIGDGTDDDGYPIKGEKTIRKCYASVRGLRGREFYNAAAVQAQDDKIFNCRYFKGLTPDMQIKYNDK
LYNITSTNDLNEKHVEYEIHAKEVKASG
>Mature_108_residues
MDPGKFNKKIKFVVIGDGTDDDGYPIKGEKTIRKCYASVRGLRGREFYNAAAVQAQDDKIFNCRYFKGLTPDMQIKYNDK
LYNITSTNDLNEKHVEYEIHAKEVKASG

Specific function: Unknown

COG id: COG5614

COG function: function code R; Bacteriophage head-tail adaptor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12345; Mature: 12345

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPGKFNKKIKFVVIGDGTDDDGYPIKGEKTIRKCYASVRGLRGREFYNAAAVQAQDDKI
CCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCE
FNCRYFKGLTPDMQIKYNDKLYNITSTNDLNEKHVEYEIHAKEVKASG
EEEEECCCCCCCEEEEECCEEEEECCCCCCCCCEEEEEEEEEEEECCC
>Mature Secondary Structure
MDPGKFNKKIKFVVIGDGTDDDGYPIKGEKTIRKCYASVRGLRGREFYNAAAVQAQDDKI
CCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCE
FNCRYFKGLTPDMQIKYNDKLYNITSTNDLNEKHVEYEIHAKEVKASG
EEEEECCCCCCCEEEEECCEEEEECCCCCCCCCEEEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA