| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756262
Identifier: 170756262
GI number: 170756262
Start: 2690523
End: 2690849
Strand: Reverse
Name: 170756262
Synonym: CLD_2063
Alternate gene names: NA
Gene position: 2690849-2690523 (Counterclockwise)
Preceding gene: 170757143
Following gene: 170756033
Centisome position: 67.98
GC content: 31.8
Gene sequence:
>327_bases ATGGATCCAGGCAAATTTAATAAAAAAATAAAATTTGTAGTTATAGGGGATGGTACAGATGATGATGGATACCCAATAAA AGGAGAAAAGACAATAAGAAAGTGTTATGCAAGTGTAAGAGGATTAAGGGGTAGAGAATTTTATAATGCTGCAGCAGTAC AAGCCCAAGATGATAAAATCTTTAATTGCAGATACTTTAAGGGACTTACACCAGATATGCAAATAAAATACAATGATAAA CTCTATAATATTACCTCTACAAATGATTTAAATGAAAAGCATGTAGAATATGAGATACATGCAAAGGAAGTGAAAGCTAG TGGCTAG
Upstream 100 bases:
>100_bases GAAACTACAGGTCCTAACTTTCATAAACTTAGTTTTAGCTTGGATTCTATTTTGATTCAACTAGAAGCTGAATATTTGAA GATTAAAAGGAGTGAAGCAG
Downstream 100 bases:
>100_bases CATGGAATTAGAAGGAATGGATAACTTAATTATAAAAATAGAAGATATGGGTAAGGCTGGAACTAGAATAGAAAACAAGG CTTTAAAAAAAGCTGGAGAA
Product: putative phage head-tail adaptor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 108; Mature: 108
Protein sequence:
>108_residues MDPGKFNKKIKFVVIGDGTDDDGYPIKGEKTIRKCYASVRGLRGREFYNAAAVQAQDDKIFNCRYFKGLTPDMQIKYNDK LYNITSTNDLNEKHVEYEIHAKEVKASG
Sequences:
>Translated_108_residues MDPGKFNKKIKFVVIGDGTDDDGYPIKGEKTIRKCYASVRGLRGREFYNAAAVQAQDDKIFNCRYFKGLTPDMQIKYNDK LYNITSTNDLNEKHVEYEIHAKEVKASG >Mature_108_residues MDPGKFNKKIKFVVIGDGTDDDGYPIKGEKTIRKCYASVRGLRGREFYNAAAVQAQDDKIFNCRYFKGLTPDMQIKYNDK LYNITSTNDLNEKHVEYEIHAKEVKASG
Specific function: Unknown
COG id: COG5614
COG function: function code R; Bacteriophage head-tail adaptor
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12345; Mature: 12345
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPGKFNKKIKFVVIGDGTDDDGYPIKGEKTIRKCYASVRGLRGREFYNAAAVQAQDDKI CCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCE FNCRYFKGLTPDMQIKYNDKLYNITSTNDLNEKHVEYEIHAKEVKASG EEEEECCCCCCCEEEEECCEEEEECCCCCCCCCEEEEEEEEEEEECCC >Mature Secondary Structure MDPGKFNKKIKFVVIGDGTDDDGYPIKGEKTIRKCYASVRGLRGREFYNAAAVQAQDDKI CCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCE FNCRYFKGLTPDMQIKYNDKLYNITSTNDLNEKHVEYEIHAKEVKASG EEEEECCCCCCCEEEEECCEEEEECCCCCCCCCEEEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA