| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is ceo
Identifier: 170756200
GI number: 170756200
Start: 635410
End: 636363
Strand: Direct
Name: ceo
Synonym: CLD_0234
Alternate gene names: 170756200
Gene position: 635410-636363 (Clockwise)
Preceding gene: 170755743
Following gene: 170756022
Centisome position: 16.05
GC content: 30.19
Gene sequence:
>954_bases ATGAAATTAGGATTTTTGATACCAAACCATCCAAATGAAAAAAGAGTTGCTTTATTACCAGAACATGTTAAAGGCTTTAA CAATGAGCTAGTTATAGAAACAGGTTTTGGTGAAACTCTAGGGATTTCAGATGCAGAATATGTAAAGGTAGGTTGCACTA TAGCTTCTCGAGAAGAAATATTTAAAACCTGTGAAGGTATATTTTCATTAAAGGTTTTAAAGCCTCAAGACTATAAGCAT ATAAGAGAAGGCCAAATTATAGTGGGCTGGACACATCCAGAGGGATCAGGAAAAACATTTATGGAAGAACAGGGCATACC TAAAAATTTAATTATAGTAGATTTAGATAATATTCATCCTTCAATCTATTATAAAGATTATGTAATACCAATGGAGTGGA TTCCATCTAACTTTGTAAGAAAAAATAGCTATATAGCAGGTTATGCATCTACTATGCATGCAGTTATGAATTATGGAAGT ATACCAACTTCAGAAACTAAAGTTGCTATATTAGGATCAGGTAACGTATCTCAAGGTGCTTTTTCGGCAATATCTAAATT TAATCCAGATATAAGAATGTTTTATAGAAAAACTATGAATCAATTAAAAGATGAGTTAGAAGAATTTGATATAATAATAA ATGGAATAGAAATGGATAATCCTAATAAGCATATACTAACTTTAGAAGATCAAATGAGATTAAAGAAAAATTGTTTAATT ATAGATGCAGCAGCTAACCTTGGAAAAGCTATAGAAGGTGCAAGACATACTACAGCATCCGATCCTATATACAATAAGGA TGGAAAATACTATTATGCAGTTAATAATTCTCCATCTATATTTTATAGACAATCCAGTAAGGCTATAAGTGAAGCTTTCA GTAAACATGTATACAGCAAAGAATTAGAATTTTATTTAGATGTTATTGCAGAAGTAGAGGAAATGATAGTATAA
Upstream 100 bases:
>100_bases ATATTATTGATATTTAACAACTTTATATATGCTATAAAGTTGTAACTATAATAAATATTGTTAAATATTATAGTCATTGT ATAAATAAAGGAGGTTATAT
Downstream 100 bases:
>100_bases AGAATTTTATTATGAATAATGAACTGAAAAACCCTATAATTAAGTGTAGTATTTAATTGATGTAAAATACTATACACTAT AAAATAAAAAGGTAGGTAAT
Product: N(5)-(carboxyethyl)ornithine synthase
Products: NA
Alternate protein names: CEOS; N(5)-(L-1-carboxyethyl)-L-ornithine:NADP(+) oxidoreductase [H]
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MKLGFLIPNHPNEKRVALLPEHVKGFNNELVIETGFGETLGISDAEYVKVGCTIASREEIFKTCEGIFSLKVLKPQDYKH IREGQIIVGWTHPEGSGKTFMEEQGIPKNLIIVDLDNIHPSIYYKDYVIPMEWIPSNFVRKNSYIAGYASTMHAVMNYGS IPTSETKVAILGSGNVSQGAFSAISKFNPDIRMFYRKTMNQLKDELEEFDIIINGIEMDNPNKHILTLEDQMRLKKNCLI IDAAANLGKAIEGARHTTASDPIYNKDGKYYYAVNNSPSIFYRQSSKAISEAFSKHVYSKELEFYLDVIAEVEEMIV
Sequences:
>Translated_317_residues MKLGFLIPNHPNEKRVALLPEHVKGFNNELVIETGFGETLGISDAEYVKVGCTIASREEIFKTCEGIFSLKVLKPQDYKH IREGQIIVGWTHPEGSGKTFMEEQGIPKNLIIVDLDNIHPSIYYKDYVIPMEWIPSNFVRKNSYIAGYASTMHAVMNYGS IPTSETKVAILGSGNVSQGAFSAISKFNPDIRMFYRKTMNQLKDELEEFDIIINGIEMDNPNKHILTLEDQMRLKKNCLI IDAAANLGKAIEGARHTTASDPIYNKDGKYYYAVNNSPSIFYRQSSKAISEAFSKHVYSKELEFYLDVIAEVEEMIV >Mature_317_residues MKLGFLIPNHPNEKRVALLPEHVKGFNNELVIETGFGETLGISDAEYVKVGCTIASREEIFKTCEGIFSLKVLKPQDYKH IREGQIIVGWTHPEGSGKTFMEEQGIPKNLIIVDLDNIHPSIYYKDYVIPMEWIPSNFVRKNSYIAGYASTMHAVMNYGS IPTSETKVAILGSGNVSQGAFSAISKFNPDIRMFYRKTMNQLKDELEEFDIIINGIEMDNPNKHILTLEDQMRLKKNCLI IDAAANLGKAIEGARHTTASDPIYNKDGKYYYAVNNSPSIFYRQSSKAISEAFSKHVYSKELEFYLDVIAEVEEMIV
Specific function: Catalyzes the NADPH-dependent reductive condensation between pyruvic acid and the side chain amino group of L-ornithine to form N(5)-(L-1-carboxyethyl)-L-ornithine. To a lesser extent, can also use L-lysine as substrate (yielding N(6)-(L-1- carboxyethyl)-
COG id: COG0686
COG function: function code E; Alanine dehydrogenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AlaDH/PNT family. CEOS subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007698 - InterPro: IPR007886 - InterPro: IPR016040 [H]
Pfam domain/function: PF01262 AlaDh_PNT_C; PF05222 AlaDh_PNT_N [H]
EC number: =1.5.1.24 [H]
Molecular weight: Translated: 35837; Mature: 35837
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLGFLIPNHPNEKRVALLPEHVKGFNNELVIETGFGETLGISDAEYVKVGCTIASREEI CEEEEECCCCCCCCEEEECCHHHCCCCCCEEEEECCCCCCCCCCCCEEEEEEEECCHHHH FKTCEGIFSLKVLKPQDYKHIREGQIIVGWTHPEGSGKTFMEEQGIPKNLIIVDLDNIHP HHHHHHHEEEEEECCCCHHHHCCCCEEEEEECCCCCCCCCHHHCCCCCEEEEEEECCCCC SIYYKDYVIPMEWIPSNFVRKNSYIAGYASTMHAVMNYGSIPTSETKVAILGSGNVSQGA EEEEEEEEEEHHHCCCCHHHCCCEEEHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHH FSAISKFNPDIRMFYRKTMNQLKDELEEFDIIINGIEMDNPNKHILTLEDQMRLKKNCLI HHHHHHCCCHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCEEEEEHHHHHHHHCEEE IDAAANLGKAIEGARHTTASDPIYNKDGKYYYAVNNSPSIFYRQSSKAISEAFSKHVYSK EECCHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEECCHHHHHHHHHHHHHHH ELEFYLDVIAEVEEMIV HHHHHHHHHHHHHHHCC >Mature Secondary Structure MKLGFLIPNHPNEKRVALLPEHVKGFNNELVIETGFGETLGISDAEYVKVGCTIASREEI CEEEEECCCCCCCCEEEECCHHHCCCCCCEEEEECCCCCCCCCCCCEEEEEEEECCHHHH FKTCEGIFSLKVLKPQDYKHIREGQIIVGWTHPEGSGKTFMEEQGIPKNLIIVDLDNIHP HHHHHHHEEEEEECCCCHHHHCCCCEEEEEECCCCCCCCCHHHCCCCCEEEEEEECCCCC SIYYKDYVIPMEWIPSNFVRKNSYIAGYASTMHAVMNYGSIPTSETKVAILGSGNVSQGA EEEEEEEEEEHHHCCCCHHHCCCEEEHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHH FSAISKFNPDIRMFYRKTMNQLKDELEEFDIIINGIEMDNPNKHILTLEDQMRLKKNCLI HHHHHHCCCHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCEEEEEHHHHHHHHCEEE IDAAANLGKAIEGARHTTASDPIYNKDGKYYYAVNNSPSIFYRQSSKAISEAFSKHVYSK EECCHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEECCHHHHHHHHHHHHHHH ELEFYLDVIAEVEEMIV HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA