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The map label for this gene is hom

Identifier: 170756180

GI number: 170756180

Start: 2002332

End: 2003558

Strand: Reverse

Name: hom

Synonym: CLD_2762

Alternate gene names: 170756180

Gene position: 2003558-2002332 (Counterclockwise)

Preceding gene: 170755871

Following gene: 170757077

Centisome position: 50.62

GC content: 25.84

Gene sequence:

>1227_bases
ATGGTTTCAATTGCTATTTTGGGTAATGGAGTGGTAGGTTCAGGGTTAGTAGAATTAATAGAGAGAAATAAAAAAGAGAA
TGAAGAAGAGAATATAAGTATAACCAAAATATTAGTTAGAGATAAAAATAAGCATAAAAATAACAAATTATTTTCAATAA
TTACAGAGGATATAAAAGAAGTTATAAAGGAAAATGTTAGTATTGTTGTAGAGGCTATAGGCGGAATAGAACCTGCTTAT
GATTATGTAAAAACTTTTTTGAAAAATAAAAAACATGTAGTTACTGCTAATAAAGATTTAATATCAAAACATGGTAATGA
ACTTTTAAAAATTGCAAAAGAAAATAATGTAAAGCTTTATTTTGAGGCTAGTGTAGGTGGAGGAATTCCTATACTTAGGC
CTATGAAAGAGTGCTTAGTAGGAAACAATGTGAAAAGCATTAAGGCTGTATTAAATGGTACTACAAATTTTATTTTAACT
AAAATGCATAAAGAAGGAGCTACTTTTAAAAATGCATTAGTTACTGCACAAAAATTAGGATTCGCAGAATTTGATTCTAC
ATCTGATATAAAAGGATATGATAGTGCAAGAAAGTTAGCTATATTATCGAATTTAGCCTATAATAAAAAATTTAATTGGG
AAAATTTTAATGTAGAAGGAATAGACAACATTGATGAATATGATATTGATATGGCAAATAAACTAGGAGGAGTTATTAAA
CTAATTGGAATAAGTGAAAAATTCCAAGATGGCATATATACAGCTGTTAAGCCAGCTATTATATCTAAAAATAGTATTTT
ATCAAGGGTAGAAAATGAGTTTAATTCTATAATAATAGAGGGAGACAGTATAGGAGAGATAGCTTTCTATGGAAAAGGTG
CAGGTAAATTACCAACAGCTAGTGCAATTTATGCAGATATTATAAATATAATAAATAATAAAAAGGAAAAAGATTTATTA
TTTAATGATGAAAAGGCTGTAATTTTTAGAGAATTTCCAAAAGAAAAAGATTGGTTTATAAGAATTTCTACTGAATATAG
AACTGAAGTTATATGTGGTATAAATAAGTTATTTAAAAAAGTCTATGTATATTCAAAAAATTGTTTTTCAAATAAAGAGG
TTTTTGCTATAGTTTACAATGAAAAAGAAAAAAATTTAAAAGATAAGCTGGATAGTATACCTAATATTAAAAAATTAAAG
GCTACTATAATTTTATTCCATAGCTAA

Upstream 100 bases:

>100_bases
AGGTATAGAATACATTGGAGATATAATAAAAGATTTTAAAGAAGCATTGAGTAAAATATAAGTAAAGCGGTTTAAAGCTT
TAGATAAAGGAGGTAGAACT

Downstream 100 bases:

>100_bases
GGGCTAGTTAGCAAAGGAAATAAAATATGGCTTTAATCATAGATAAAAACCTTCCAGCTTACCAAATATTAAAATCTGAA
AATATAAATATAATGGATAA

Product: homoserine dehydrogenase

Products: NA

Alternate protein names: HDH [H]

Number of amino acids: Translated: 408; Mature: 408

Protein sequence:

>408_residues
MVSIAILGNGVVGSGLVELIERNKKENEEENISITKILVRDKNKHKNNKLFSIITEDIKEVIKENVSIVVEAIGGIEPAY
DYVKTFLKNKKHVVTANKDLISKHGNELLKIAKENNVKLYFEASVGGGIPILRPMKECLVGNNVKSIKAVLNGTTNFILT
KMHKEGATFKNALVTAQKLGFAEFDSTSDIKGYDSARKLAILSNLAYNKKFNWENFNVEGIDNIDEYDIDMANKLGGVIK
LIGISEKFQDGIYTAVKPAIISKNSILSRVENEFNSIIIEGDSIGEIAFYGKGAGKLPTASAIYADIINIINNKKEKDLL
FNDEKAVIFREFPKEKDWFIRISTEYRTEVICGINKLFKKVYVYSKNCFSNKEVFAIVYNEKEKNLKDKLDSIPNIKKLK
ATIILFHS

Sequences:

>Translated_408_residues
MVSIAILGNGVVGSGLVELIERNKKENEEENISITKILVRDKNKHKNNKLFSIITEDIKEVIKENVSIVVEAIGGIEPAY
DYVKTFLKNKKHVVTANKDLISKHGNELLKIAKENNVKLYFEASVGGGIPILRPMKECLVGNNVKSIKAVLNGTTNFILT
KMHKEGATFKNALVTAQKLGFAEFDSTSDIKGYDSARKLAILSNLAYNKKFNWENFNVEGIDNIDEYDIDMANKLGGVIK
LIGISEKFQDGIYTAVKPAIISKNSILSRVENEFNSIIIEGDSIGEIAFYGKGAGKLPTASAIYADIINIINNKKEKDLL
FNDEKAVIFREFPKEKDWFIRISTEYRTEVICGINKLFKKVYVYSKNCFSNKEVFAIVYNEKEKNLKDKLDSIPNIKKLK
ATIILFHS
>Mature_408_residues
MVSIAILGNGVVGSGLVELIERNKKENEEENISITKILVRDKNKHKNNKLFSIITEDIKEVIKENVSIVVEAIGGIEPAY
DYVKTFLKNKKHVVTANKDLISKHGNELLKIAKENNVKLYFEASVGGGIPILRPMKECLVGNNVKSIKAVLNGTTNFILT
KMHKEGATFKNALVTAQKLGFAEFDSTSDIKGYDSARKLAILSNLAYNKKFNWENFNVEGIDNIDEYDIDMANKLGGVIK
LIGISEKFQDGIYTAVKPAIISKNSILSRVENEFNSIIIEGDSIGEIAFYGKGAGKLPTASAIYADIINIINNKKEKDLL
FNDEKAVIFREFPKEKDWFIRISTEYRTEVICGINKLFKKVYVYSKNCFSNKEVFAIVYNEKEKNLKDKLDSIPNIKKLK
ATIILFHS

Specific function: Catalyzes 2 nonconsecutive reactions in the common biosynthetic pathway leading from Asp to diaminopimelate and Lys, to Met, and to Thr and Ile. [C]

COG id: COG0460

COG function: function code E; Homoserine dehydrogenase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ACT domain [H]

Homologues:

Organism=Escherichia coli, GI1786183, Length=261, Percent_Identity=27.2030651340996, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002912
- InterPro:   IPR005106
- InterPro:   IPR016204
- InterPro:   IPR001342
- InterPro:   IPR019811
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01842 ACT; PF00742 Homoserine_dh; PF03447 NAD_binding_3 [H]

EC number: =1.1.1.3 [H]

Molecular weight: Translated: 45804; Mature: 45804

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSIAILGNGVVGSGLVELIERNKKENEEENISITKILVRDKNKHKNNKLFSIITEDIKE
CEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHH
VIKENVSIVVEAIGGIEPAYDYVKTFLKNKKHVVTANKDLISKHGNELLKIAKENNVKLY
HHHHHHHEEHHHHCCCCHHHHHHHHHHCCCCEEEECCHHHHHHCCHHHHHHEECCCEEEE
FEASVGGGIPILRPMKECLVGNNVKSIKAVLNGTTNFILTKMHKEGATFKNALVTAQKLG
EEECCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEEHHCCCHHHHHHHHHHHCC
FAEFDSTSDIKGYDSARKLAILSNLAYNKKFNWENFNVEGIDNIDEYDIDMANKLGGVIK
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCEEE
LIGISEKFQDGIYTAVKPAIISKNSILSRVENEFNSIIIEGDSIGEIAFYGKGAGKLPTA
EEECCHHHHCCCHHHHCHHHHCHHHHHHHHHHHHCEEEEECCCCCEEEEECCCCCCCCCH
SAIYADIINIINNKKEKDLLFNDEKAVIFREFPKEKDWFIRISTEYRTEVICGINKLFKK
HHHHHHHHHHHCCCCCCCCEECCCCEEEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHH
VYVYSKNCFSNKEVFAIVYNEKEKNLKDKLDSIPNIKKLKATIILFHS
HHHHCCCCCCCCCEEEEEECCCCCHHHHHHHCCCCHHEEEEEEEEEEC
>Mature Secondary Structure
MVSIAILGNGVVGSGLVELIERNKKENEEENISITKILVRDKNKHKNNKLFSIITEDIKE
CEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHH
VIKENVSIVVEAIGGIEPAYDYVKTFLKNKKHVVTANKDLISKHGNELLKIAKENNVKLY
HHHHHHHEEHHHHCCCCHHHHHHHHHHCCCCEEEECCHHHHHHCCHHHHHHEECCCEEEE
FEASVGGGIPILRPMKECLVGNNVKSIKAVLNGTTNFILTKMHKEGATFKNALVTAQKLG
EEECCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEEHHCCCHHHHHHHHHHHCC
FAEFDSTSDIKGYDSARKLAILSNLAYNKKFNWENFNVEGIDNIDEYDIDMANKLGGVIK
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCEEE
LIGISEKFQDGIYTAVKPAIISKNSILSRVENEFNSIIIEGDSIGEIAFYGKGAGKLPTA
EEECCHHHHCCCHHHHCHHHHCHHHHHHHHHHHHCEEEEECCCCCEEEEECCCCCCCCCH
SAIYADIINIINNKKEKDLLFNDEKAVIFREFPKEKDWFIRISTEYRTEVICGINKLFKK
HHHHHHHHHHHCCCCCCCCEECCCCEEEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHH
VYVYSKNCFSNKEVFAIVYNEKEKNLKDKLDSIPNIKKLKATIILFHS
HHHHCCCCCCCCCEEEEEECCCCCHHHHHHHCCCCHHEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3139660; 9384377; 3098560 [H]