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The map label for this gene is yobV [H]

Identifier: 170756167

GI number: 170756167

Start: 979536

End: 980468

Strand: Direct

Name: yobV [H]

Synonym: CLD_3696

Alternate gene names: 170756167

Gene position: 979536-980468 (Clockwise)

Preceding gene: 170754925

Following gene: 170756390

Centisome position: 24.75

GC content: 28.4

Gene sequence:

>933_bases
TTGAAAATAGATAGATTGATATCCATTATTATGGTGTTACTAAATAATGAAAGAATAAGTGCAATAAAATTAGCTGAGAT
GTTTGAAGTTACACCTAGAACCATTTATAGGGATATAGATACAATATCTTTAGCAGGGATACCAATAATTACTCATACTG
GGGTAAATGGCGGTGTTAGTATAATGCCTGAATATAAAGTTGATAAAAAGTTTTTTACTGCTTCAGATATATCAACACTT
TTAATGGGACTTTCTAGTGTTTCAACAACATTATCCAATAAAGAAGTTATAGGCACTTTAGAAAAGGTAAAGAGTTTACT
TCCGAAAGACCAATTTAGAGATATTGAATTAAAGTCAAATCAAATAACTATTGACCTTACTACGTGGATGGGGAATAAGA
GTTTTCAACCAAATCTTGAGAAAGTAAAAAGCGCTTTAAATGATAGTAAGTATTTATCATTTGAATATTATGGTGGTAAT
AGAAAAAAAGATAAACGTTGTATAGAACCATATAAATTAATATTGAAAGAAAATAACTGGTATTTACAAGGATATTGTAC
TTTAAGAGAAGATTTTAGAGTATTTAAATTATCTCGAATTTCAAACCTTGAAATATTAGAATCAATATTTGTACCAAGGG
AGTTTAAATCAAAACCATTAGATGGAAGTGGATGGATAGATAAAAGGCTTATTACAATTAAGCTTCTAGTTGATTGGTCT
TTGAGAGAACAAATGGTTGAAAGATGTGGAGAAGATAATGTAAAGGCTTATGGAGAGGATAAATTTATAGTTGAGTTTCC
TTTTGTAGCTGATGATTTAGGCTATAATATATTAATGGGATTTGGAGATAAATGTGAATGTTTAGCTCCAGAGAATGTAC
GTGTAGAACTTATTAAACGTATTAAAAAATTGTTACATATTTATGAAAATTAA

Upstream 100 bases:

>100_bases
GTATATTATTTCTAACAGATTAAATATATCACAGTAAATTTGACACCACTATGTCAAGATTATAAAATAAATGTATACAT
GATTTCAAGGAGAGATATTA

Downstream 100 bases:

>100_bases
TATTTACTTAGAAAAACCTCACTTACAACTGATACGGAGAACCGTACCATAAGTAAGTGAGGTTTTTACTAAAGTTGGAT
GAAGGTATGGTGGTAAGGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MKIDRLISIIMVLLNNERISAIKLAEMFEVTPRTIYRDIDTISLAGIPIITHTGVNGGVSIMPEYKVDKKFFTASDISTL
LMGLSSVSTTLSNKEVIGTLEKVKSLLPKDQFRDIELKSNQITIDLTTWMGNKSFQPNLEKVKSALNDSKYLSFEYYGGN
RKKDKRCIEPYKLILKENNWYLQGYCTLREDFRVFKLSRISNLEILESIFVPREFKSKPLDGSGWIDKRLITIKLLVDWS
LREQMVERCGEDNVKAYGEDKFIVEFPFVADDLGYNILMGFGDKCECLAPENVRVELIKRIKKLLHIYEN

Sequences:

>Translated_310_residues
MKIDRLISIIMVLLNNERISAIKLAEMFEVTPRTIYRDIDTISLAGIPIITHTGVNGGVSIMPEYKVDKKFFTASDISTL
LMGLSSVSTTLSNKEVIGTLEKVKSLLPKDQFRDIELKSNQITIDLTTWMGNKSFQPNLEKVKSALNDSKYLSFEYYGGN
RKKDKRCIEPYKLILKENNWYLQGYCTLREDFRVFKLSRISNLEILESIFVPREFKSKPLDGSGWIDKRLITIKLLVDWS
LREQMVERCGEDNVKAYGEDKFIVEFPFVADDLGYNILMGFGDKCECLAPENVRVELIKRIKKLLHIYEN
>Mature_310_residues
MKIDRLISIIMVLLNNERISAIKLAEMFEVTPRTIYRDIDTISLAGIPIITHTGVNGGVSIMPEYKVDKKFFTASDISTL
LMGLSSVSTTLSNKEVIGTLEKVKSLLPKDQFRDIELKSNQITIDLTTWMGNKSFQPNLEKVKSALNDSKYLSFEYYGGN
RKKDKRCIEPYKLILKENNWYLQGYCTLREDFRVFKLSRISNLEILESIFVPREFKSKPLDGSGWIDKRLITIKLLVDWS
LREQMVERCGEDNVKAYGEDKFIVEFPFVADDLGYNILMGFGDKCECLAPENVRVELIKRIKKLLHIYEN

Specific function: Unknown

COG id: COG2378

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH deoR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013196
- InterPro:   IPR001034
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 35749; Mature: 35749

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: PS51000 HTH_DEOR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIDRLISIIMVLLNNERISAIKLAEMFEVTPRTIYRDIDTISLAGIPIITHTGVNGGVS
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHCCCEEEECCCEEEEECCCCCCEE
IMPEYKVDKKFFTASDISTLLMGLSSVSTTLSNKEVIGTLEKVKSLLPKDQFRDIELKSN
EEECCCCCCCEECHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCEEEECC
QITIDLTTWMGNKSFQPNLEKVKSALNDSKYLSFEYYGGNRKKDKRCIEPYKLILKENNW
EEEEEEEEECCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHEEEECCCE
YLQGYCTLREDFRVFKLSRISNLEILESIFVPREFKSKPLDGSGWIDKRLITIKLLVDWS
EEEEEEEECCCCCEEEHHHCCCHHHHHHHHCCHHHCCCCCCCCCCCCCEEEEEEEEECHH
LREQMVERCGEDNVKAYGEDKFIVEFPFVADDLGYNILMGFGDKCECLAPENVRVELIKR
HHHHHHHHCCCCCCEEECCCEEEEECCCEECCCCCEEEECCCCCCEEECCCCHHHHHHHH
IKKLLHIYEN
HHHHHHHHCC
>Mature Secondary Structure
MKIDRLISIIMVLLNNERISAIKLAEMFEVTPRTIYRDIDTISLAGIPIITHTGVNGGVS
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHCCCEEEECCCEEEEECCCCCCEE
IMPEYKVDKKFFTASDISTLLMGLSSVSTTLSNKEVIGTLEKVKSLLPKDQFRDIELKSN
EEECCCCCCCEECHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCEEEECC
QITIDLTTWMGNKSFQPNLEKVKSALNDSKYLSFEYYGGNRKKDKRCIEPYKLILKENNW
EEEEEEEEECCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHEEEECCCE
YLQGYCTLREDFRVFKLSRISNLEILESIFVPREFKSKPLDGSGWIDKRLITIKLLVDWS
EEEEEEEECCCCCEEEHHHCCCHHHHHHHHCCHHHCCCCCCCCCCCCCEEEEEEEEECHH
LREQMVERCGEDNVKAYGEDKFIVEFPFVADDLGYNILMGFGDKCECLAPENVRVELIKR
HHHHHHHHCCCCCCEEECCCEEEEECCCEECCCCCEEEECCCCCCEEECCCCHHHHHHHH
IKKLLHIYEN
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]