Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170756157

Identifier: 170756157

GI number: 170756157

Start: 3871972

End: 3873099

Strand: Reverse

Name: 170756157

Synonym: CLD_0928

Alternate gene names: NA

Gene position: 3873099-3871972 (Counterclockwise)

Preceding gene: 170755275

Following gene: 170754861

Centisome position: 97.85

GC content: 28.1

Gene sequence:

>1128_bases
TTGTATTATAGAAATTTTGCAAAAAAAATAATAATATTTTTAATTTTTACTACTACCATTTCATTATTTGGATGTAAGAA
AAATAAAGAAGATACTAAGGTAACTAATGACTTTGACATAAAAATAGCAACAAATTTATTGAATTCTTATATGGAGAGCC
TAATTGAAGAAAATATGGAAGGAGCTCAAAAGCTATACTCTAAGAAATTAAAAAAGGATAAAATAAAAAAGGAGAATAAG
GACGTAAAAATAAAGGGTTATACTACAGAGGAGATAAATGAAGTGGGAAAATCAGCACTATTTGTAGCAAAAGTAGTCAG
TGTTAATGTCAAGGAACCCTATACCTCTGTTGAAGAATACAAAATAAGGGTAATAAAAGAAGAAAATGAATATAAAATAG
ATGAAGTAAATATAAGTATAGACAAAGAAGCATTTACAAAAAATAATAGAATAAGATATAGAAATAAAAATAATGTTAAA
ACGGAGTTAATAATAAAGCCATCAACCTTGCCTGATTATGCATATGCAAAGGATGATAAGGCTAATATAGAAAAGCTAAT
TGTGCCTAAAAAAAATATAGGACCTATGAGTCTTTCTTATAGTGAAAATTTTATAGCAATATCAACTTATGATGAAAACT
CTTATATTGGAATAATAACAATAGATGAATCAAAGGCTGTCCAAGGGGGGCAAGATCAAGGAGATCAAGGAAGCCAAGGA
GATCAAGGAGGAGCTGGGGGTGGTGAAACAGGGCAAAAGGGAACAGATATAATGGAGGAGATTGGAGAAAAGCCAATAGG
AAAAGAAATATCTTCCTTAGATTTATTAAAGGGGAGTAAAATAGATTTTATGGTGTTTTCTCCTGATGAAAAATTTATAG
CAGTTCAATATGAAACTAGTGATAAAACAAAAAATATAAGAATATATCAAGCTGATAGTGCAGACATAATACCTTTTAAG
ATGGAGGATAAATTTCCTTTAAGTAAAGTAAATGTAACATTGTCTTCTTTTGCTACAGATTCTATAATATTTAATGTATC
TAGTAAAGAAAAAAATGATAAAAATTCAAATGAATTTATAGGTAAGTGGCAACTGGATCTAAAAGAATTTAAAGTTAAAA
AAATGTAG

Upstream 100 bases:

>100_bases
AATATATATATAAAAATAAAAATAATGATTTTTAATTAAATTTTCTTTTTAAGGAGAAAATAAAAGTAAATGGTGAATAA
ATAAGGGAGGGAAGAAAATA

Downstream 100 bases:

>100_bases
TTGTTTTGAAAAAAAAGTATCTGTGACATATAATATTCACAGATACTTTTTTTTGGAGGAATTTATTATGGAAAGAAAAT
GGTATGATAAGCCATATCAT

Product: putative phage head-tail adaptor

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MYYRNFAKKIIIFLIFTTTISLFGCKKNKEDTKVTNDFDIKIATNLLNSYMESLIEENMEGAQKLYSKKLKKDKIKKENK
DVKIKGYTTEEINEVGKSALFVAKVVSVNVKEPYTSVEEYKIRVIKEENEYKIDEVNISIDKEAFTKNNRIRYRNKNNVK
TELIIKPSTLPDYAYAKDDKANIEKLIVPKKNIGPMSLSYSENFIAISTYDENSYIGIITIDESKAVQGGQDQGDQGSQG
DQGGAGGGETGQKGTDIMEEIGEKPIGKEISSLDLLKGSKIDFMVFSPDEKFIAVQYETSDKTKNIRIYQADSADIIPFK
MEDKFPLSKVNVTLSSFATDSIIFNVSSKEKNDKNSNEFIGKWQLDLKEFKVKKM

Sequences:

>Translated_375_residues
MYYRNFAKKIIIFLIFTTTISLFGCKKNKEDTKVTNDFDIKIATNLLNSYMESLIEENMEGAQKLYSKKLKKDKIKKENK
DVKIKGYTTEEINEVGKSALFVAKVVSVNVKEPYTSVEEYKIRVIKEENEYKIDEVNISIDKEAFTKNNRIRYRNKNNVK
TELIIKPSTLPDYAYAKDDKANIEKLIVPKKNIGPMSLSYSENFIAISTYDENSYIGIITIDESKAVQGGQDQGDQGSQG
DQGGAGGGETGQKGTDIMEEIGEKPIGKEISSLDLLKGSKIDFMVFSPDEKFIAVQYETSDKTKNIRIYQADSADIIPFK
MEDKFPLSKVNVTLSSFATDSIIFNVSSKEKNDKNSNEFIGKWQLDLKEFKVKKM
>Mature_375_residues
MYYRNFAKKIIIFLIFTTTISLFGCKKNKEDTKVTNDFDIKIATNLLNSYMESLIEENMEGAQKLYSKKLKKDKIKKENK
DVKIKGYTTEEINEVGKSALFVAKVVSVNVKEPYTSVEEYKIRVIKEENEYKIDEVNISIDKEAFTKNNRIRYRNKNNVK
TELIIKPSTLPDYAYAKDDKANIEKLIVPKKNIGPMSLSYSENFIAISTYDENSYIGIITIDESKAVQGGQDQGDQGSQG
DQGGAGGGETGQKGTDIMEEIGEKPIGKEISSLDLLKGSKIDFMVFSPDEKFIAVQYETSDKTKNIRIYQADSADIIPFK
MEDKFPLSKVNVTLSSFATDSIIFNVSSKEKNDKNSNEFIGKWQLDLKEFKVKKM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42544; Mature: 42544

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYYRNFAKKIIIFLIFTTTISLFGCKKNKEDTKVTNDFDIKIATNLLNSYMESLIEENME
CCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHH
GAQKLYSKKLKKDKIKKENKDVKIKGYTTEEINEVGKSALFVAKVVSVNVKEPYTSVEEY
HHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHCHHHEEEEHEEEEECCCCCCCCCEE
KIRVIKEENEYKIDEVNISIDKEAFTKNNRIRYRNKNNVKTELIIKPSTLPDYAYAKDDK
EEEEEECCCCEEEEEEEEEECHHHHCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCCC
ANIEKLIVPKKNIGPMSLSYSENFIAISTYDENSYIGIITIDESKAVQGGQDQGDQGSQG
CCCEEEECCCCCCCCEEEECCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCC
DQGGAGGGETGQKGTDIMEEIGEKPIGKEISSLDLLKGSKIDFMVFSPDEKFIAVQYETS
CCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHCCCCCEEEEEECCCCCEEEEEEECC
DKTKNIRIYQADSADIIPFKMEDKFPLSKVNVTLSSFATDSIIFNVSSKEKNDKNSNEFI
CCCCEEEEEECCCCCEEEEECCCCCCCHHEEEEHHHCCCCEEEEEECCCCCCCCCCCCEE
GKWQLDLKEFKVKKM
EEEEECHHHHEECCC
>Mature Secondary Structure
MYYRNFAKKIIIFLIFTTTISLFGCKKNKEDTKVTNDFDIKIATNLLNSYMESLIEENME
CCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHH
GAQKLYSKKLKKDKIKKENKDVKIKGYTTEEINEVGKSALFVAKVVSVNVKEPYTSVEEY
HHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHCHHHEEEEHEEEEECCCCCCCCCEE
KIRVIKEENEYKIDEVNISIDKEAFTKNNRIRYRNKNNVKTELIIKPSTLPDYAYAKDDK
EEEEEECCCCEEEEEEEEEECHHHHCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCCC
ANIEKLIVPKKNIGPMSLSYSENFIAISTYDENSYIGIITIDESKAVQGGQDQGDQGSQG
CCCEEEECCCCCCCCEEEECCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCC
DQGGAGGGETGQKGTDIMEEIGEKPIGKEISSLDLLKGSKIDFMVFSPDEKFIAVQYETS
CCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHCCCCCEEEEEECCCCCEEEEEEECC
DKTKNIRIYQADSADIIPFKMEDKFPLSKVNVTLSSFATDSIIFNVSSKEKNDKNSNEFI
CCCCEEEEEECCCCCEEEEECCCCCCCHHEEEEHHHCCCCEEEEEECCCCCCCCCCCCEE
GKWQLDLKEFKVKKM
EEEEECHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA