| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756156
Identifier: 170756156
GI number: 170756156
Start: 2193434
End: 2195545
Strand: Reverse
Name: 170756156
Synonym: CLD_2583
Alternate gene names: NA
Gene position: 2195545-2193434 (Counterclockwise)
Preceding gene: 170757156
Following gene: 170756822
Centisome position: 55.47
GC content: 31.77
Gene sequence:
>2112_bases GTGAAAGAAAAAACAGATCTTAAACAAGTCTATATTCCTACTATAGAAGAAATGCAAAGTTGGTATGAAGATGATTTGCG CAAGGAAGCCTTAAAATCATCAGAATACGATAATAATAAAAAAATAGAAGAACAAGGTGAGTTTTTTAAAGCTTTTCGAA AATTTGAAGAAAGAGATTATGAAATTTCTCTAGATTCTAAAAAAAACAATGTTTATTACGAAAAATATAAAGCTTATGTG GAAGAAGAAACAGAAAACAAGGGCAAAAAGATACAACAAATTGAAAATTCAATTGAATATGAAAAGTTTTTCCTTCGCTT AGAAAGAAGGGTCAATAGCCAGAGTAATAATTATAGTCATTATGGCAGTAATTCAGCTACAAGATATCGAGTTGATTGCA TAAAAAAATTGGAAAAAGAGTTAGAGACAATTCTAGAAAATTCTCCGGAAGCATGGGAATTTTATTATAAACGTCAATTG ATAAGTGATATAGAAACCCAACATCAGCAGCGCTTGGTAACTGTACCTTATGTAGTTAAAGCAAAACAAAAAGTAATAGA TTCGCTGAATTTAGGTGTTCCTGTATATATTGTAGGACATTTGGGAAGTGGAAAAACACAATTAGCAACTGAAGCAGCTC TAGATTTTACTATTCAAAATAGAATACAAAAAGAATTAGAAGATAAAATGGAAGATTGGTTTTCTAGAAATCCAAATGCC ACAGAAAAAGATGCTATTGAAAAATTTGGAGAATTTAATGAAGAAAGAAAACTTTACTATAAAAATATATTAACTAATGG AAGTAAAGATGAAATAGAATCTTTACAGCCACTGTTTATATCTGGATCCCATAATTTAACTTATGAAGATATGTTTGTAG AGAAAACTTTGACTCTCAAACACAGTTTTTCTAAAGGATCTTATTCGGATTATCTGAATATGATTATAGGAGATTTTTAT GAATGGATGGATGAGCATAGAACTAGACTAGAGAAGATGACCGGCGAAGAGCAGTTACAACTTAAGATTCAAATATGGAA AAGTTTTTCTGATTTATTGGTAGCAAGTAATAGTGCTTTTGGTACTGAAATCAAAAAAATAGAAAGAGAAATTTTGATTG CAGTAAAAGAAGGCCGCCCTGTAATCGTAGATGAATTAAATACAATTGCTATGCAAAACTTAATTGCTTTAAATGATATA CTGCAGCGTCATGCAGGAAATACAGCTTATATTACAGGAGTTGGTCCTGTTTTGATTAAGCCTGGATTTGGATTCATTGG TACAGGAAACCTATCAAGCCAAATGGTTAATTATGAAGGAACCAATGAGTTAAATCCAGCCTTTAAATCACGTTTCGTAA CCATTGAATATAACTATGTACCTCAAAAGACAATTGGTTCTTTAGAAGATCAAGAATTCCCAGAAAAAAATGAACTTTTT AGAATAATAATAGCACGATTAGTTGATAAAGGTGGAAATATCCATCTTCCTAATTCCAAAAGAACATTAGAAGAATTGTT TAGATTTTCTCAATTGTGTAGGGTTACTCAAAATGTCTTTATGGGGAAATGGAAAGATGACGAAGCTCAAAAAGATTGTG GAATGGATGAACTAGAACTCAGGGAGTCTGTATTATCAATCCGTAATATTTTACACGTTTTAGATAATTGGAATGTAGGC GAAGAAAAAGACTTGAGTAAAGCTTTGTGGGATGGATTTATTAGTTCAATAACTTATCCTGATGACCAAAACTATATTCT ATCACAAGCAGTACGTTTTGGATTTTTCCCTATGGGAGAAGGATGGAAGGTCGAGACAAAAGGTATAGGAGAAGCAACCA CAACCTATGATGAAATTCGCACTCGTCCATATCACTATGTCCGCCCATTAATAGAAACTTTAAGCTATTTAGATGTAGTT CATCTGATATTTGGAAAAGGAACGCCTAGAAAAACTTTGCCAAAAGGACTAAAAGAAACTTTTGAAGCTGCTATTGATGA TTCATCCCGAATTGATGCGATAGAGTATCAAAAACTAGACCAACAATTATTTCATTTAGAGCATTCAAAAGATCTACTTG AATACTTAGAAGATAATGGAGAAGAAAAATGA
Upstream 100 bases:
>100_bases GATAAAAATCCCGAATTTTAAAAAAATCGGGATTTTTATTCATATTGCCATTTGATATATTGATAATATAATAGGATATT ATACGAAGGAGGAAACCTCT
Downstream 100 bases:
>100_bases AAATAAATTTGTCAGTAGAGGTCAAGGATTTTAAGCGTCAAGTTAAATATCTAAGAGAAAAATTGAATAAATGCCAAAGA GATGGAATTTTAGATGATGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 703; Mature: 703
Protein sequence:
>703_residues MKEKTDLKQVYIPTIEEMQSWYEDDLRKEALKSSEYDNNKKIEEQGEFFKAFRKFEERDYEISLDSKKNNVYYEKYKAYV EEETENKGKKIQQIENSIEYEKFFLRLERRVNSQSNNYSHYGSNSATRYRVDCIKKLEKELETILENSPEAWEFYYKRQL ISDIETQHQQRLVTVPYVVKAKQKVIDSLNLGVPVYIVGHLGSGKTQLATEAALDFTIQNRIQKELEDKMEDWFSRNPNA TEKDAIEKFGEFNEERKLYYKNILTNGSKDEIESLQPLFISGSHNLTYEDMFVEKTLTLKHSFSKGSYSDYLNMIIGDFY EWMDEHRTRLEKMTGEEQLQLKIQIWKSFSDLLVASNSAFGTEIKKIEREILIAVKEGRPVIVDELNTIAMQNLIALNDI LQRHAGNTAYITGVGPVLIKPGFGFIGTGNLSSQMVNYEGTNELNPAFKSRFVTIEYNYVPQKTIGSLEDQEFPEKNELF RIIIARLVDKGGNIHLPNSKRTLEELFRFSQLCRVTQNVFMGKWKDDEAQKDCGMDELELRESVLSIRNILHVLDNWNVG EEKDLSKALWDGFISSITYPDDQNYILSQAVRFGFFPMGEGWKVETKGIGEATTTYDEIRTRPYHYVRPLIETLSYLDVV HLIFGKGTPRKTLPKGLKETFEAAIDDSSRIDAIEYQKLDQQLFHLEHSKDLLEYLEDNGEEK
Sequences:
>Translated_703_residues MKEKTDLKQVYIPTIEEMQSWYEDDLRKEALKSSEYDNNKKIEEQGEFFKAFRKFEERDYEISLDSKKNNVYYEKYKAYV EEETENKGKKIQQIENSIEYEKFFLRLERRVNSQSNNYSHYGSNSATRYRVDCIKKLEKELETILENSPEAWEFYYKRQL ISDIETQHQQRLVTVPYVVKAKQKVIDSLNLGVPVYIVGHLGSGKTQLATEAALDFTIQNRIQKELEDKMEDWFSRNPNA TEKDAIEKFGEFNEERKLYYKNILTNGSKDEIESLQPLFISGSHNLTYEDMFVEKTLTLKHSFSKGSYSDYLNMIIGDFY EWMDEHRTRLEKMTGEEQLQLKIQIWKSFSDLLVASNSAFGTEIKKIEREILIAVKEGRPVIVDELNTIAMQNLIALNDI LQRHAGNTAYITGVGPVLIKPGFGFIGTGNLSSQMVNYEGTNELNPAFKSRFVTIEYNYVPQKTIGSLEDQEFPEKNELF RIIIARLVDKGGNIHLPNSKRTLEELFRFSQLCRVTQNVFMGKWKDDEAQKDCGMDELELRESVLSIRNILHVLDNWNVG EEKDLSKALWDGFISSITYPDDQNYILSQAVRFGFFPMGEGWKVETKGIGEATTTYDEIRTRPYHYVRPLIETLSYLDVV HLIFGKGTPRKTLPKGLKETFEAAIDDSSRIDAIEYQKLDQQLFHLEHSKDLLEYLEDNGEEK >Mature_703_residues MKEKTDLKQVYIPTIEEMQSWYEDDLRKEALKSSEYDNNKKIEEQGEFFKAFRKFEERDYEISLDSKKNNVYYEKYKAYV EEETENKGKKIQQIENSIEYEKFFLRLERRVNSQSNNYSHYGSNSATRYRVDCIKKLEKELETILENSPEAWEFYYKRQL ISDIETQHQQRLVTVPYVVKAKQKVIDSLNLGVPVYIVGHLGSGKTQLATEAALDFTIQNRIQKELEDKMEDWFSRNPNA TEKDAIEKFGEFNEERKLYYKNILTNGSKDEIESLQPLFISGSHNLTYEDMFVEKTLTLKHSFSKGSYSDYLNMIIGDFY EWMDEHRTRLEKMTGEEQLQLKIQIWKSFSDLLVASNSAFGTEIKKIEREILIAVKEGRPVIVDELNTIAMQNLIALNDI LQRHAGNTAYITGVGPVLIKPGFGFIGTGNLSSQMVNYEGTNELNPAFKSRFVTIEYNYVPQKTIGSLEDQEFPEKNELF RIIIARLVDKGGNIHLPNSKRTLEELFRFSQLCRVTQNVFMGKWKDDEAQKDCGMDELELRESVLSIRNILHVLDNWNVG EEKDLSKALWDGFISSITYPDDQNYILSQAVRFGFFPMGEGWKVETKGIGEATTTYDEIRTRPYHYVRPLIETLSYLDVV HLIFGKGTPRKTLPKGLKETFEAAIDDSSRIDAIEYQKLDQQLFHLEHSKDLLEYLEDNGEEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 81980; Mature: 81980
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEKTDLKQVYIPTIEEMQSWYEDDLRKEALKSSEYDNNKKIEEQGEFFKAFRKFEERDY CCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCC EISLDSKKNNVYYEKYKAYVEEETENKGKKIQQIENSIEYEKFFLRLERRVNSQSNNYSH EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC YGSNSATRYRVDCIKKLEKELETILENSPEAWEFYYKRQLISDIETQHQQRLVTVPYVVK CCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEECHHHHH AKQKVIDSLNLGVPVYIVGHLGSGKTQLATEAALDFTIQNRIQKELEDKMEDWFSRNPNA HHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC TEKDAIEKFGEFNEERKLYYKNILTNGSKDEIESLQPLFISGSHNLTYEDMFVEKTLTLK CHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHH HSFSKGSYSDYLNMIIGDFYEWMDEHRTRLEKMTGEEQLQLKIQIWKSFSDLLVASNSAF HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEHHHHHHHHHHHHHCCCCCH GTEIKKIEREILIAVKEGRPVIVDELNTIAMQNLIALNDILQRHAGNTAYITGVGPVLIK HHHHHHHHHHHEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEC PGFGFIGTGNLSSQMVNYEGTNELNPAFKSRFVTIEYNYVPQKTIGSLEDQEFPEKNELF CCCCEEECCCCHHHHCCCCCCCCCCHHHHCEEEEEEECCCCCHHHCCCCCCCCCCHHHHH RIIIARLVDKGGNIHLPNSKRTLEELFRFSQLCRVTQNVFMGKWKDDEAQKDCGMDELEL HHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCHHHH RESVLSIRNILHVLDNWNVGEEKDLSKALWDGFISSITYPDDQNYILSQAVRFGFFPMGE HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCC GWKVETKGIGEATTTYDEIRTRPYHYVRPLIETLSYLDVVHLIFGKGTPRKTLPKGLKET CCEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH FEAAIDDSSRIDAIEYQKLDQQLFHLEHSKDLLEYLEDNGEEK HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKEKTDLKQVYIPTIEEMQSWYEDDLRKEALKSSEYDNNKKIEEQGEFFKAFRKFEERDY CCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCC EISLDSKKNNVYYEKYKAYVEEETENKGKKIQQIENSIEYEKFFLRLERRVNSQSNNYSH EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC YGSNSATRYRVDCIKKLEKELETILENSPEAWEFYYKRQLISDIETQHQQRLVTVPYVVK CCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEECHHHHH AKQKVIDSLNLGVPVYIVGHLGSGKTQLATEAALDFTIQNRIQKELEDKMEDWFSRNPNA HHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC TEKDAIEKFGEFNEERKLYYKNILTNGSKDEIESLQPLFISGSHNLTYEDMFVEKTLTLK CHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHH HSFSKGSYSDYLNMIIGDFYEWMDEHRTRLEKMTGEEQLQLKIQIWKSFSDLLVASNSAF HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEHHHHHHHHHHHHHCCCCCH GTEIKKIEREILIAVKEGRPVIVDELNTIAMQNLIALNDILQRHAGNTAYITGVGPVLIK HHHHHHHHHHHEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEC PGFGFIGTGNLSSQMVNYEGTNELNPAFKSRFVTIEYNYVPQKTIGSLEDQEFPEKNELF CCCCEEECCCCHHHHCCCCCCCCCCHHHHCEEEEEEECCCCCHHHCCCCCCCCCCHHHHH RIIIARLVDKGGNIHLPNSKRTLEELFRFSQLCRVTQNVFMGKWKDDEAQKDCGMDELEL HHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCHHHH RESVLSIRNILHVLDNWNVGEEKDLSKALWDGFISSITYPDDQNYILSQAVRFGFFPMGE HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCC GWKVETKGIGEATTTYDEIRTRPYHYVRPLIETLSYLDVVHLIFGKGTPRKTLPKGLKET CCEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH FEAAIDDSSRIDAIEYQKLDQQLFHLEHSKDLLEYLEDNGEEK HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9665876 [H]