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The map label for this gene is ydfS [H]

Identifier: 170756125

GI number: 170756125

Start: 1145083

End: 1145772

Strand: Direct

Name: ydfS [H]

Synonym: CLD_3530

Alternate gene names: 170756125

Gene position: 1145083-1145772 (Clockwise)

Preceding gene: 170757323

Following gene: 170754368

Centisome position: 28.93

GC content: 27.39

Gene sequence:

>690_bases
ATGTCAGGGAAAATTATAGAAGTAATTCTCAGGAGCATTTTTACTTATATTATTCTATTAATCTTAGGAAGAATAATAGG
AAGAAAATTAATATCAAATATGACATTTTATGATTTTATGATTGGTGTTTTAATTGGGTCCATTGGAGTAAGAATAGCAT
TAGGTCCACGGGACACACCACTTTTAGCTTTAATTTCAGCCATTGTTGTTACGATATTAGTTATTATTACAGACTATTTA
GATATCAAAAGTATTAATTTTAGAAAATTAATTGATGGTGACCCCATTGTATTAATAAGTAATGGTAAATTGTTAGATTA
TAATTTAAAAAAAGTAAAGATTACTATAAATACCTTAATGATGGAATTAAGAAAAAAAGACATATTTAATGTTGATGATG
TGGCCTTTGCAGTCATAGAGACCGACGGAGAATTAAGTGTATTACCAAAAGCAAATAAGCAACCAATAACAACTGGTGAT
TTAAATATTTCAACAAATACTAATGGATTAATGAGGGATATAATTATTGATGGAAAAATAATGTATGATAATTTGAAGTC
CACTAATCATGATGAGCAATGGGTTAGGCAACAATTGAAGAATCATAATATTTATAGTGTAGAGGAAGTTTTCTATGCTG
GTTTAAATTCCTCAGGAATTTTATGTGTTTCAACAAAAACAAAACAATAA

Upstream 100 bases:

>100_bases
GCCTAAAAGTTATATAAGAGAACCTAAAAAGAGTAAATGAATATTTTTTAAGGGGAAGGTGAATATATAAATAGGAAAAT
GTTAACAGAAGGAGTATGCT

Downstream 100 bases:

>100_bases
GAATCATGAAAGAGAAATAGTGGCATTTCAATTTATGATGATTCTTATGTTTTTTATTTTATAAAAAAGTTATTATAAAA
ATTTGAATTTGAACAATTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 228

Protein sequence:

>229_residues
MSGKIIEVILRSIFTYIILLILGRIIGRKLISNMTFYDFMIGVLIGSIGVRIALGPRDTPLLALISAIVVTILVIITDYL
DIKSINFRKLIDGDPIVLISNGKLLDYNLKKVKITINTLMMELRKKDIFNVDDVAFAVIETDGELSVLPKANKQPITTGD
LNISTNTNGLMRDIIIDGKIMYDNLKSTNHDEQWVRQQLKNHNIYSVEEVFYAGLNSSGILCVSTKTKQ

Sequences:

>Translated_229_residues
MSGKIIEVILRSIFTYIILLILGRIIGRKLISNMTFYDFMIGVLIGSIGVRIALGPRDTPLLALISAIVVTILVIITDYL
DIKSINFRKLIDGDPIVLISNGKLLDYNLKKVKITINTLMMELRKKDIFNVDDVAFAVIETDGELSVLPKANKQPITTGD
LNISTNTNGLMRDIIIDGKIMYDNLKSTNHDEQWVRQQLKNHNIYSVEEVFYAGLNSSGILCVSTKTKQ
>Mature_228_residues
SGKIIEVILRSIFTYIILLILGRIIGRKLISNMTFYDFMIGVLIGSIGVRIALGPRDTPLLALISAIVVTILVIITDYLD
IKSINFRKLIDGDPIVLISNGKLLDYNLKKVKITINTLMMELRKKDIFNVDDVAFAVIETDGELSVLPKANKQPITTGDL
NISTNTNGLMRDIIIDGKIMYDNLKSTNHDEQWVRQQLKNHNIYSVEEVFYAGLNSSGILCVSTKTKQ

Specific function: Unknown

COG id: COG2323

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0702 family [H]

Homologues:

Organism=Escherichia coli, GI1787135, Length=142, Percent_Identity=28.8732394366197, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007353
- InterPro:   IPR023090 [H]

Pfam domain/function: PF04239 DUF421 [H]

EC number: NA

Molecular weight: Translated: 25645; Mature: 25514

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGKIIEVILRSIFTYIILLILGRIIGRKLISNMTFYDFMIGVLIGSIGVRIALGPRDTP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCEEEEECCCCCH
LLALISAIVVTILVIITDYLDIKSINFRKLIDGDPIVLISNGKLLDYNLKKVKITINTLM
HHHHHHHHHHHHHHHHHHHHCCCCCCHHEECCCCCEEEEECCEEEEEEEEEEEEEHHHHH
MELRKKDIFNVDDVAFAVIETDGELSVLPKANKQPITTGDLNISTNTNGLMRDIIIDGKI
HHHHHHCCCCCCCEEEEEEECCCCEEECCCCCCCCCCCCCEEEECCCCCCEEHEEECCEE
MYDNLKSTNHDEQWVRQQLKNHNIYSVEEVFYAGLNSSGILCVSTKTKQ
EECCCCCCCCHHHHHHHHHHCCCCEEHHHHHHHCCCCCCEEEEECCCCC
>Mature Secondary Structure 
SGKIIEVILRSIFTYIILLILGRIIGRKLISNMTFYDFMIGVLIGSIGVRIALGPRDTP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCEEEEECCCCCH
LLALISAIVVTILVIITDYLDIKSINFRKLIDGDPIVLISNGKLLDYNLKKVKITINTLM
HHHHHHHHHHHHHHHHHHHHCCCCCCHHEECCCCCEEEEECCEEEEEEEEEEEEEHHHHH
MELRKKDIFNVDDVAFAVIETDGELSVLPKANKQPITTGDLNISTNTNGLMRDIIIDGKI
HHHHHHCCCCCCCEEEEEEECCCCEEECCCCCCCCCCCCCEEEECCCCCCEEHEEECCEE
MYDNLKSTNHDEQWVRQQLKNHNIYSVEEVFYAGLNSSGILCVSTKTKQ
EECCCCCCCCHHHHHHHHHHCCCCEEHHHHHHHCCCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]