| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756055
Identifier: 170756055
GI number: 170756055
Start: 2516343
End: 2517626
Strand: Reverse
Name: 170756055
Synonym: CLD_2240
Alternate gene names: NA
Gene position: 2517626-2516343 (Counterclockwise)
Preceding gene: 170756851
Following gene: 170757118
Centisome position: 63.6
GC content: 24.84
Gene sequence:
>1284_bases ATGGAATTTAATTATTTAAGTGGTTATGAAAATAAAGACAGTAATTATAGTAAAACAAATTATTATAAAATAATAATAGG TTTATCTATGCTTCTTTGTATTCTTTGGGTGATATTTGTAGATACAAAGCCTTTTTCAGATTTTGAATATTATTATAATT TAGCAGTTAGTATAGCTAATGGAGGTGAGTGGGGAGATACTTATACCTCCGTAGGTTACAGTATAGTTTTAGGAGGACTA TTTAAGCTTTTTGGAGCTAGTCTAGCCTTAGGTAAAATATTTAATTTAGTACTAACTTTTTTTGGACAAGTATTATTCTT AGGAATATTAAGAAAAATAAAAATTACAGAACGAAATAGAAAAATAGTATTTACTCTATTTGTGTTATTTCCAAATAATA TATTCTTTAACAGTGTTTTAGGTACAGAAATATTATTTACTACATTACTTTTATTATTAACATATTTATACTTTAGTGAT ATAAAATATAAATATGTAGTTTTAGGAGTATTAGTAGGAGCAACCACCATGGTAAAGCCATTTTTCTTATTATATGCCTT TGCTATATTTTTAGTTGAATTATTAAAAGAAAAATCTTTTCTAAAATCTTTAAAATCAGCCATAATAATAGCTGTAGTAG CTTTAATTACTATAAGTCCTTGGATTTATAGAAATACAAAATATAATGGAGAACGTACCTTTGTATCAAATAACGGAGGA ATAGTACTTTATATAAATAATAATTCTGAAAACAATATGGGAAGATGGATGAGTATATATGATGTAGAAAACTCATTAGC AGAAACAGAGGAATACAAAAAAGCTTCTTATACACAAAAAAATAAAATGCTTAATAAAGCAGCTAAAGAATGGATAAAAT CTCATCCAAAGGAATTTGTAATATTAGGTTTTAAAAGACTCTTTAATACATATATGGTGGGAGATGACGTAGCATATAGC ATTCATGGGGTAACTATGAATGATACTGTTAAATTTAAATTATTTGCAGCAACAAACTGTATAAGAAATATGGTTTTCAT TCCAGCTATTATATATGTATTAATTTACAGCATTTTTATACTTATACAAATAATAAAAAGAAGAACAGAAAATCTAAATA AATTTAATTTGTATTCTACAATTCTATTTCATATGTTTACTTCAGTATACTTTATTACTGAAGGGCAAGGCAGATATGCT TTCCCATTAATATTTATAATTATATACTTTTGGGTTTATTTTATTAAACATGGAATACTTTTATTTAAGGAGTTAAAAAG ATGA
Upstream 100 bases:
>100_bases TTTTGGAAAGGACAAACCTTTTTTGGTAAATATGGTATTGTGGGTAATATCAGTAGTGGTTATAATATATTTTAAACTTT AAGGATGGTGTATAAATGTA
Downstream 100 bases:
>100_bases TATATTTAATATTGACATCAGTTTTTCTAGGAGCATTAGGACAAATATTGGTGAAATATGGAGCAGTTAATTTAACATTA AATTTTTCACCAGCACACCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 427; Mature: 427
Protein sequence:
>427_residues MEFNYLSGYENKDSNYSKTNYYKIIIGLSMLLCILWVIFVDTKPFSDFEYYYNLAVSIANGGEWGDTYTSVGYSIVLGGL FKLFGASLALGKIFNLVLTFFGQVLFLGILRKIKITERNRKIVFTLFVLFPNNIFFNSVLGTEILFTTLLLLLTYLYFSD IKYKYVVLGVLVGATTMVKPFFLLYAFAIFLVELLKEKSFLKSLKSAIIIAVVALITISPWIYRNTKYNGERTFVSNNGG IVLYINNNSENNMGRWMSIYDVENSLAETEEYKKASYTQKNKMLNKAAKEWIKSHPKEFVILGFKRLFNTYMVGDDVAYS IHGVTMNDTVKFKLFAATNCIRNMVFIPAIIYVLIYSIFILIQIIKRRTENLNKFNLYSTILFHMFTSVYFITEGQGRYA FPLIFIIIYFWVYFIKHGILLFKELKR
Sequences:
>Translated_427_residues MEFNYLSGYENKDSNYSKTNYYKIIIGLSMLLCILWVIFVDTKPFSDFEYYYNLAVSIANGGEWGDTYTSVGYSIVLGGL FKLFGASLALGKIFNLVLTFFGQVLFLGILRKIKITERNRKIVFTLFVLFPNNIFFNSVLGTEILFTTLLLLLTYLYFSD IKYKYVVLGVLVGATTMVKPFFLLYAFAIFLVELLKEKSFLKSLKSAIIIAVVALITISPWIYRNTKYNGERTFVSNNGG IVLYINNNSENNMGRWMSIYDVENSLAETEEYKKASYTQKNKMLNKAAKEWIKSHPKEFVILGFKRLFNTYMVGDDVAYS IHGVTMNDTVKFKLFAATNCIRNMVFIPAIIYVLIYSIFILIQIIKRRTENLNKFNLYSTILFHMFTSVYFITEGQGRYA FPLIFIIIYFWVYFIKHGILLFKELKR >Mature_427_residues MEFNYLSGYENKDSNYSKTNYYKIIIGLSMLLCILWVIFVDTKPFSDFEYYYNLAVSIANGGEWGDTYTSVGYSIVLGGL FKLFGASLALGKIFNLVLTFFGQVLFLGILRKIKITERNRKIVFTLFVLFPNNIFFNSVLGTEILFTTLLLLLTYLYFSD IKYKYVVLGVLVGATTMVKPFFLLYAFAIFLVELLKEKSFLKSLKSAIIIAVVALITISPWIYRNTKYNGERTFVSNNGG IVLYINNNSENNMGRWMSIYDVENSLAETEEYKKASYTQKNKMLNKAAKEWIKSHPKEFVILGFKRLFNTYMVGDDVAYS IHGVTMNDTVKFKLFAATNCIRNMVFIPAIIYVLIYSIFILIQIIKRRTENLNKFNLYSTILFHMFTSVYFITEGQGRYA FPLIFIIIYFWVYFIKHGILLFKELKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49579; Mature: 49579
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFNYLSGYENKDSNYSKTNYYKIIIGLSMLLCILWVIFVDTKPFSDFEYYYNLAVSIAN CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEEEEEEEEC GGEWGDTYTSVGYSIVLGGLFKLFGASLALGKIFNLVLTFFGQVLFLGILRKIKITERNR CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC KIVFTLFVLFPNNIFFNSVLGTEILFTTLLLLLTYLYFSDIKYKYVVLGVLVGATTMVKP EEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH FFLLYAFAIFLVELLKEKSFLKSLKSAIIIAVVALITISPWIYRNTKYNGERTFVSNNGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCCCEEEEECCCC IVLYINNNSENNMGRWMSIYDVENSLAETEEYKKASYTQKNKMLNKAAKEWIKSHPKEFV EEEEEECCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE ILGFKRLFNTYMVGDDVAYSIHGVTMNDTVKFKLFAATNCIRNMVFIPAIIYVLIYSIFI EHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH LIQIIKRRTENLNKFNLYSTILFHMFTSVYFITEGQGRYAFPLIFIIIYFWVYFIKHGIL HHHHHHHHHCCCCHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH LFKELKR HHHHHCC >Mature Secondary Structure MEFNYLSGYENKDSNYSKTNYYKIIIGLSMLLCILWVIFVDTKPFSDFEYYYNLAVSIAN CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEEEEEEEEC GGEWGDTYTSVGYSIVLGGLFKLFGASLALGKIFNLVLTFFGQVLFLGILRKIKITERNR CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC KIVFTLFVLFPNNIFFNSVLGTEILFTTLLLLLTYLYFSDIKYKYVVLGVLVGATTMVKP EEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH FFLLYAFAIFLVELLKEKSFLKSLKSAIIIAVVALITISPWIYRNTKYNGERTFVSNNGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCCCEEEEECCCC IVLYINNNSENNMGRWMSIYDVENSLAETEEYKKASYTQKNKMLNKAAKEWIKSHPKEFV EEEEEECCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE ILGFKRLFNTYMVGDDVAYSIHGVTMNDTVKFKLFAATNCIRNMVFIPAIIYVLIYSIFI EHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH LIQIIKRRTENLNKFNLYSTILFHMFTSVYFITEGQGRYAFPLIFIIIYFWVYFIKHGIL HHHHHHHHHCCCCHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH LFKELKR HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA