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The map label for this gene is yqeV [H]

Identifier: 170756026

GI number: 170756026

Start: 3202267

End: 3203565

Strand: Reverse

Name: yqeV [H]

Synonym: CLD_1590

Alternate gene names: 170756026

Gene position: 3203565-3202267 (Counterclockwise)

Preceding gene: 170756725

Following gene: 170756666

Centisome position: 80.93

GC content: 28.79

Gene sequence:

>1299_bases
ATGAAGGTTGCTTTTTCTACATTAGGATGTAGAGTAAATGTATATGAAACAGAAGCTATGACAGAAAAATTTATAAAGCA
AGGTTATCAAATAGTGGATTTTAATGAAGTGGCTGATGTATATGTAATAAACACCTGTACGGTGACTAATATGGGTGATA
AAAAATCAAGACAGATGATAAGTAGAGGAAGAAGACAAAATTCAAAAGCTATAATTGCAGTAGTAGGTTGTTATTCTCAA
ATAGCTCCAGAAGAAGTATCTAAAATAGATGGTGTAGATGTAGTTCTAGGAACTAGAAATAAAGGTGATATAGTTTATTG
GGTAAATAGAGCTATGGAAGAAAAAAATCAAGTAATAGAAGTTAAAGATGTTCTTAGAAATAAAGAATTTGAAGAATTAA
ATATAGAAGAGTATAGAGATAAAACTAGAGCCTTTTTAAAAATACAGGATGGATGTAATAGATTTTGTTCTTATTGCTTG
ATACCCTTTGCAAGAGGAGCGGTATGTAGCAAAAAACCAGAAAAGATTATGGAAGAGGTCGAAAAACTTTCTAAGCATGG
ATTTAAAGAAATAATTTTATCTGGTATAGACATAGCTTCCTATGGTTTTGATTTAGAAGGAAAGTATAATTTAACATCTA
TATTAGAAGAGATAGATAGAGTAGAAGGTATTGAAAGAATAAGAATAGGCTCTATAGACCCAACTTTTTTTACAGAAGAA
GAAATAATAAGAATAAGTAAACTAAAGAGATTCTGTCCACATTTTCATTTGTCCCTTCAGAGCGGATGTAACGAAACTTT
AAAGAGAATGAATAGAAAATATACCGTAGAGCAGTATAAAGAGATAGTACATAACTTAAGAACAAATATAGAATCTGTTT
CTATAACTACAGATATAATAGTAGGTTTCCCAGGAGAAACAGAAGAAGAGTTTAATAAAACCTATGAATTTTTAAGAGAT
ATAAAACTGTCTAAAATGCATGTATTTAAATTTAGCCCAAGGAAAGGTACTAGGGCAGAAGGAATGAAGAATCAAGTAGA
TGGTAAAATAAAAGAAGAAAGAAGTAATAAAATAATAAATTTAGATAAAGACCTTGAAAAAGAATTTATGAATAAATTTA
TTGAAAAAGAAATGCCGGTATTATATGAGCAGGAAACTAAAGAAAAAGGAATTTTTGAAGGATATACTCCAAATTACATA
AAGATATATTCTAAAAGCTCAAAGGATATTACTGGGGAAATAATAAATACAACGCTGAAAGAAGTTTCTAAGGATTTTAT
TAAAGGAGAAATTTATTAG

Upstream 100 bases:

>100_bases
TAGTAACTTTAGGGCCTAGAATATTTAGAACAGAAACAGCAGGTATAGTATGTGCTTCAATAATTTCATATGAATTAGGA
GATCTAGGAGGAAATATATA

Downstream 100 bases:

>100_bases
AGTAGAAGGATTTTTAATCTATTTATTGAATATTTCACTTAACAGGAGGTGATATAATGGAAAATTGTATTTTTTGTAAA
ATATTGAAGGGAGAAATACC

Product: RNA modification protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 432; Mature: 432

Protein sequence:

>432_residues
MKVAFSTLGCRVNVYETEAMTEKFIKQGYQIVDFNEVADVYVINTCTVTNMGDKKSRQMISRGRRQNSKAIIAVVGCYSQ
IAPEEVSKIDGVDVVLGTRNKGDIVYWVNRAMEEKNQVIEVKDVLRNKEFEELNIEEYRDKTRAFLKIQDGCNRFCSYCL
IPFARGAVCSKKPEKIMEEVEKLSKHGFKEIILSGIDIASYGFDLEGKYNLTSILEEIDRVEGIERIRIGSIDPTFFTEE
EIIRISKLKRFCPHFHLSLQSGCNETLKRMNRKYTVEQYKEIVHNLRTNIESVSITTDIIVGFPGETEEEFNKTYEFLRD
IKLSKMHVFKFSPRKGTRAEGMKNQVDGKIKEERSNKIINLDKDLEKEFMNKFIEKEMPVLYEQETKEKGIFEGYTPNYI
KIYSKSSKDITGEIINTTLKEVSKDFIKGEIY

Sequences:

>Translated_432_residues
MKVAFSTLGCRVNVYETEAMTEKFIKQGYQIVDFNEVADVYVINTCTVTNMGDKKSRQMISRGRRQNSKAIIAVVGCYSQ
IAPEEVSKIDGVDVVLGTRNKGDIVYWVNRAMEEKNQVIEVKDVLRNKEFEELNIEEYRDKTRAFLKIQDGCNRFCSYCL
IPFARGAVCSKKPEKIMEEVEKLSKHGFKEIILSGIDIASYGFDLEGKYNLTSILEEIDRVEGIERIRIGSIDPTFFTEE
EIIRISKLKRFCPHFHLSLQSGCNETLKRMNRKYTVEQYKEIVHNLRTNIESVSITTDIIVGFPGETEEEFNKTYEFLRD
IKLSKMHVFKFSPRKGTRAEGMKNQVDGKIKEERSNKIINLDKDLEKEFMNKFIEKEMPVLYEQETKEKGIFEGYTPNYI
KIYSKSSKDITGEIINTTLKEVSKDFIKGEIY
>Mature_432_residues
MKVAFSTLGCRVNVYETEAMTEKFIKQGYQIVDFNEVADVYVINTCTVTNMGDKKSRQMISRGRRQNSKAIIAVVGCYSQ
IAPEEVSKIDGVDVVLGTRNKGDIVYWVNRAMEEKNQVIEVKDVLRNKEFEELNIEEYRDKTRAFLKIQDGCNRFCSYCL
IPFARGAVCSKKPEKIMEEVEKLSKHGFKEIILSGIDIASYGFDLEGKYNLTSILEEIDRVEGIERIRIGSIDPTFFTEE
EIIRISKLKRFCPHFHLSLQSGCNETLKRMNRKYTVEQYKEIVHNLRTNIESVSITTDIIVGFPGETEEEFNKTYEFLRD
IKLSKMHVFKFSPRKGTRAEGMKNQVDGKIKEERSNKIINLDKDLEKEFMNKFIEKEMPVLYEQETKEKGIFEGYTPNYI
KIYSKSSKDITGEIINTTLKEVSKDFIKGEIY

Specific function: Unknown

COG id: COG0621

COG function: function code J; 2-methylthioadenine synthetase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TRAM domain [H]

Homologues:

Organism=Homo sapiens, GI28872784, Length=392, Percent_Identity=29.8469387755102, Blast_Score=174, Evalue=2e-43,
Organism=Homo sapiens, GI28872782, Length=392, Percent_Identity=29.8469387755102, Blast_Score=174, Evalue=2e-43,
Organism=Homo sapiens, GI93277076, Length=450, Percent_Identity=27.7777777777778, Blast_Score=166, Evalue=4e-41,
Organism=Escherichia coli, GI1786882, Length=442, Percent_Identity=27.8280542986425, Blast_Score=194, Evalue=1e-50,
Organism=Escherichia coli, GI1787057, Length=403, Percent_Identity=25.5583126550869, Blast_Score=157, Evalue=1e-39,
Organism=Caenorhabditis elegans, GI17553146, Length=420, Percent_Identity=29.0476190476191, Blast_Score=167, Evalue=8e-42,
Organism=Caenorhabditis elegans, GI71996771, Length=285, Percent_Identity=27.3684210526316, Blast_Score=108, Evalue=4e-24,
Organism=Drosophila melanogaster, GI21356207, Length=418, Percent_Identity=26.7942583732057, Blast_Score=157, Evalue=1e-38,
Organism=Drosophila melanogaster, GI19922432, Length=439, Percent_Identity=26.6514806378132, Blast_Score=152, Evalue=3e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR020612
- InterPro:   IPR013848
- InterPro:   IPR006467
- InterPro:   IPR007197
- InterPro:   IPR002792 [H]

Pfam domain/function: PF04055 Radical_SAM; PF01938 TRAM; PF00919 UPF0004 [H]

EC number: NA

Molecular weight: Translated: 50079; Mature: 50079

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: PS01278 UPF0004

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVAFSTLGCRVNVYETEAMTEKFIKQGYQIVDFNEVADVYVINTCTVTNMGDKKSRQMI
CEEEEEECCCEEEEEEHHHHHHHHHHCCCEEEEHHCCCCEEEEEEEEECCCCCHHHHHHH
SRGRRQNSKAIIAVVGCYSQIAPEEVSKIDGVDVVLGTRNKGDIVYWVNRAMEEKNQVIE
HHHCCCCCCEEEEEECHHHHCCHHHHHHCCCCEEEEECCCCCCEEEEHHHHHHHHHCEEH
VKDVLRNKEFEELNIEEYRDKTRAFLKIQDGCNRFCSYCLIPFARGAVCSKKPEKIMEEV
HHHHHCCCCCCCCCHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
EKLSKHGFKEIILSGIDIASYGFDLEGKYNLTSILEEIDRVEGIERIRIGSIDPTFFTEE
HHHHHCCHHHHHHHCCCHHHCCCCCCCCCCHHHHHHHHHHHCCHHEEEECCCCCCCCCHH
EIIRISKLKRFCPHFHLSLQSGCNETLKRMNRKYTVEQYKEIVHNLRTNIESVSITTDII
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEEEEE
VGFPGETEEEFNKTYEFLRDIKLSKMHVFKFSPRKGTRAEGMKNQVDGKIKEERSNKIIN
EECCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHCCCCHHHHHCCCEEE
LDKDLEKEFMNKFIEKEMPVLYEQETKEKGIFEGYTPNYIKIYSKSSKDITGEIINTTLK
CCHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHH
EVSKDFIKGEIY
HHHHHHHCCCCC
>Mature Secondary Structure
MKVAFSTLGCRVNVYETEAMTEKFIKQGYQIVDFNEVADVYVINTCTVTNMGDKKSRQMI
CEEEEEECCCEEEEEEHHHHHHHHHHCCCEEEEHHCCCCEEEEEEEEECCCCCHHHHHHH
SRGRRQNSKAIIAVVGCYSQIAPEEVSKIDGVDVVLGTRNKGDIVYWVNRAMEEKNQVIE
HHHCCCCCCEEEEEECHHHHCCHHHHHHCCCCEEEEECCCCCCEEEEHHHHHHHHHCEEH
VKDVLRNKEFEELNIEEYRDKTRAFLKIQDGCNRFCSYCLIPFARGAVCSKKPEKIMEEV
HHHHHCCCCCCCCCHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
EKLSKHGFKEIILSGIDIASYGFDLEGKYNLTSILEEIDRVEGIERIRIGSIDPTFFTEE
HHHHHCCHHHHHHHCCCHHHCCCCCCCCCCHHHHHHHHHHHCCHHEEEECCCCCCCCCHH
EIIRISKLKRFCPHFHLSLQSGCNETLKRMNRKYTVEQYKEIVHNLRTNIESVSITTDII
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEEEEE
VGFPGETEEEFNKTYEFLRDIKLSKMHVFKFSPRKGTRAEGMKNQVDGKIKEERSNKIIN
EECCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHCCCCHHHHHCCCEEE
LDKDLEKEFMNKFIEKEMPVLYEQETKEKGIFEGYTPNYIKIYSKSSKDITGEIINTTLK
CCHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHH
EVSKDFIKGEIY
HHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969508; 9023197; 9384377 [H]