| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756018
Identifier: 170756018
GI number: 170756018
Start: 1270697
End: 1271119
Strand: Direct
Name: 170756018
Synonym: CLD_3421
Alternate gene names: NA
Gene position: 1270697-1271119 (Clockwise)
Preceding gene: 170756660
Following gene: 170757809
Centisome position: 32.1
GC content: 15.13
Gene sequence:
>423_bases ATGAAGAGAACGCATAATATTTTAAATATAATTTTAAGTATAATTCAAATTATATTTATTTTACCAGCTTTAATTTTAGA AAACTTAGCTAAAAAGAAAATGGGAGTTATAAGATATCTTATTTTTAAAAAAGAAGAGTTTTCATCAGGAATTTTTAATG CAAATAATTTAATAATATATAAATGGATATTATTGTTTATTTCAATAATTATAATTATAATTTTTATAGTAAATATGAAA AAGAAATTGAAATGCAAAATCAACTTTTTTATAATAATATTACTTAATATAATTTTATTTTTACTTGTAAGTTATGAAAG TATATTTAATTTACAGGCATATCATTTTTTTATTATAGAAATATTTATAATAATAATTATAGAATATATTAAACTTTTTA TAAATATCTTCAGCAATAGATAG
Upstream 100 bases:
>100_bases ATTTTAATAAGAATTTCCAATCTATCTCAATTAAATTAAATCTATTTTTAGACACTCTCTTTTGTTATATTTATAAAATA TAAATCAGGAGATATAAAGA
Downstream 100 bases:
>100_bases ATGTATCTATGAAATTGTTAATAATTTAAGCCAGTGGAGTTTTTCTGCTATTGGCTTATTTATTTTATAAGATTTATTTG AGTTAGTTATTTAAATTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MKRTHNILNIILSIIQIIFILPALILENLAKKKMGVIRYLIFKKEEFSSGIFNANNLIIYKWILLFISIIIIIIFIVNMK KKLKCKINFFIIILLNIILFLLVSYESIFNLQAYHFFIIEIFIIIIIEYIKLFINIFSNR
Sequences:
>Translated_140_residues MKRTHNILNIILSIIQIIFILPALILENLAKKKMGVIRYLIFKKEEFSSGIFNANNLIIYKWILLFISIIIIIIFIVNMK KKLKCKINFFIIILLNIILFLLVSYESIFNLQAYHFFIIEIFIIIIIEYIKLFINIFSNR >Mature_140_residues MKRTHNILNIILSIIQIIFILPALILENLAKKKMGVIRYLIFKKEEFSSGIFNANNLIIYKWILLFISIIIIIIFIVNMK KKLKCKINFFIIILLNIILFLLVSYESIFNLQAYHFFIIEIFIIIIIEYIKLFINIFSNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16714; Mature: 16714
Theoretical pI: Translated: 10.51; Mature: 10.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRTHNILNIILSIIQIIFILPALILENLAKKKMGVIRYLIFKKEEFSSGIFNANNLIIY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH KWILLFISIIIIIIFIVNMKKKLKCKINFFIIILLNIILFLLVSYESIFNLQAYHFFIIE HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFIIIIIEYIKLFINIFSNR HHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKRTHNILNIILSIIQIIFILPALILENLAKKKMGVIRYLIFKKEEFSSGIFNANNLIIY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH KWILLFISIIIIIIFIVNMKKKLKCKINFFIIILLNIILFLLVSYESIFNLQAYHFFIIE HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFIIIIIEYIKLFINIFSNR HHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA