Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170755974

Identifier: 170755974

GI number: 170755974

Start: 624913

End: 625497

Strand: Direct

Name: 170755974

Synonym: CLD_0241

Alternate gene names: NA

Gene position: 624913-625497 (Clockwise)

Preceding gene: 170754681

Following gene: 170756614

Centisome position: 15.79

GC content: 25.47

Gene sequence:

>585_bases
ATGTATAAATTAAGTAGTTTATCAACAAACACCTTGAAAATATCAAAGGATGAAAAATTAGATTTAGAAATATTTTTACA
TAGTAAGAGAGTTGCTATATATGTAAAAAAAATTGCAAAGTTGATGAAGCTTAGTTCAAAACAAAGTAATGATTTAGTTC
TATTAGCATTAAATCATGATATAGGTAAGGCTAGAATACCCTCTAATATATTAAACAAAAAAGATAAATTAAGTCATAGT
GAATTCGAAATTGTAAAAAGACATACTCAGTTTGGTGCAGATATATTAATGGAATATGGATATTGTTTAGAAATTTGTAA
TGTTGTAAAATTTCATCATGAAAATTTTGATGGCAGTGGCTATTATGGATTAAAAGGAAAATCTATTCCTATGGCGGCCA
GAATACTTCGTATAGCAGATGTATACGAGGCTTTAACTACTGATAGATGCTATAGAAGGGCTTATACAAGAGAAGCAGCT
TTAGAGATTATGGTAAAAGAAGAAAATTTATATGATCCTAAAATATTGGAATTATTTATTAAAAAAATATATATAAATTC
TTTTAATTTACAATTATGTATATAA

Upstream 100 bases:

>100_bases
TATTTAGCTAGATATAGCCAACATAATTAGTTTAAATATGTAAACTAATTATGTTGGCTTTTGTTTTTATAAATTTATAG
GGATGGGGAGGAGTAATAAT

Downstream 100 bases:

>100_bases
TTAGTCAGTAATTATATATAACGAGGAGGAAATTTATGAAGTTTAAATTTAAAAATACTAAGGATAAAAATTTTATAAGT
GTAAAAAGTGTTATAAATAT

Product: HDIG domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MYKLSSLSTNTLKISKDEKLDLEIFLHSKRVAIYVKKIAKLMKLSSKQSNDLVLLALNHDIGKARIPSNILNKKDKLSHS
EFEIVKRHTQFGADILMEYGYCLEICNVVKFHHENFDGSGYYGLKGKSIPMAARILRIADVYEALTTDRCYRRAYTREAA
LEIMVKEENLYDPKILELFIKKIYINSFNLQLCI

Sequences:

>Translated_194_residues
MYKLSSLSTNTLKISKDEKLDLEIFLHSKRVAIYVKKIAKLMKLSSKQSNDLVLLALNHDIGKARIPSNILNKKDKLSHS
EFEIVKRHTQFGADILMEYGYCLEICNVVKFHHENFDGSGYYGLKGKSIPMAARILRIADVYEALTTDRCYRRAYTREAA
LEIMVKEENLYDPKILELFIKKIYINSFNLQLCI
>Mature_194_residues
MYKLSSLSTNTLKISKDEKLDLEIFLHSKRVAIYVKKIAKLMKLSSKQSNDLVLLALNHDIGKARIPSNILNKKDKLSHS
EFEIVKRHTQFGADILMEYGYCLEICNVVKFHHENFDGSGYYGLKGKSIPMAARILRIADVYEALTTDRCYRRAYTREAA
LEIMVKEENLYDPKILELFIKKIYINSFNLQLCI

Specific function: Unknown

COG id: COG2206

COG function: function code T; HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HD domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR003607 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22457; Mature: 22457

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKLSSLSTNTLKISKDEKLDLEIFLHSKRVAIYVKKIAKLMKLSSKQSNDLVLLALNHD
CCCCCCCCCCEEEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCC
IGKARIPSNILNKKDKLSHSEFEIVKRHTQFGADILMEYGYCLEICNVVKFHHENFDGSG
CCCCCCCHHHHCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
YYGLKGKSIPMAARILRIADVYEALTTDRCYRRAYTREAALEIMVKEENLYDPKILELFI
EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHH
KKIYINSFNLQLCI
HHHHHCCCEEEEEC
>Mature Secondary Structure
MYKLSSLSTNTLKISKDEKLDLEIFLHSKRVAIYVKKIAKLMKLSSKQSNDLVLLALNHD
CCCCCCCCCCEEEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCC
IGKARIPSNILNKKDKLSHSEFEIVKRHTQFGADILMEYGYCLEICNVVKFHHENFDGSG
CCCCCCCHHHHCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
YYGLKGKSIPMAARILRIADVYEALTTDRCYRRAYTREAALEIMVKEENLYDPKILELFI
EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHH
KKIYINSFNLQLCI
HHHHHCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]