Click here to switch to the map view.

The map label for this gene is 170755967

Identifier: 170755967

GI number: 170755967

Start: 1490593

End: 1490733

Strand: Direct

Name: 170755967

Synonym: CLD_3211

Alternate gene names: NA

Gene position: 1490593-1490733 (Clockwise)

Preceding gene: 170756808

Following gene: 170754674

Centisome position: 37.66

GC content: 29.08

Gene sequence:

>141_bases
GTGTTTAAATATGGTTCCTTAGAAAGAATATTACCAAGGCAAAATATGCAATTAGCTTATAAAAGGGTTGTTGCAAATAA
AGGTAAGTCAGGTATTGATAGAACGACAGTTTATGAATTTAAACAATTTCTAATTACCTAG

Upstream 100 bases:

>100_bases
AACTAAATATTTAAGCTCTAAAGCTAAAAGTAAGGTGGAAGCTAAGGATAAGCATGGAGTTCATAGAGTAACTACGGCAA
CCACAAGTGGATAAACCAAT

Downstream 100 bases:

>100_bases
ATTTCGTACAAATATAAAAATTATATTTCCATATAATTTAGATTCCTCAGTAGCCCCATGCATTTGCATGGGGTTATATG
GTGCCTTAATTTATTATGCG

Product: reverse transcriptase/maturase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 46; Mature: 46

Protein sequence:

>46_residues
MFKYGSLERILPRQNMQLAYKRVVANKGKSGIDRTTVYEFKQFLIT

Sequences:

>Translated_46_residues
MFKYGSLERILPRQNMQLAYKRVVANKGKSGIDRTTVYEFKQFLIT
>Mature_46_residues
MFKYGSLERILPRQNMQLAYKRVVANKGKSGIDRTTVYEFKQFLIT

Specific function: Unknown

COG id: COG3344

COG function: function code L; Retron-type reverse transcriptase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5441; Mature: 5441

Theoretical pI: Translated: 10.78; Mature: 10.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKYGSLERILPRQNMQLAYKRVVANKGKSGIDRTTVYEFKQFLIT
CCCCCCHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MFKYGSLERILPRQNMQLAYKRVVANKGKSGIDRTTVYEFKQFLIT
CCCCCCHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA