| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755922
Identifier: 170755922
GI number: 170755922
Start: 301902
End: 304538
Strand: Direct
Name: 170755922
Synonym: CLD_0522
Alternate gene names: NA
Gene position: 301902-304538 (Clockwise)
Preceding gene: 170756715
Following gene: 170755065
Centisome position: 7.63
GC content: 24.61
Gene sequence:
>2637_bases ATGGCTAAAGGTGGTAAAATAAAAATAAAGAATTATAGAGAATTTGAGAGGGGAGCAGTTATGGATGAAAAAGGATTTGA ACTACAATCAGATGAGATAGAATTAATATTAAAGAATCATCTTAAAATAGAATCAAAGGTAATGTCTATAGAAACATTAT TAGGAAATGCTAGAATGAGAAATAAAATAGTTTATGATCCATATTATCAAAGAAATTATGTATGGGATAATGATAAAGCT ACATATTTTATTGAAAGTATATTATTGGGAACGGAAATTCCACCTTTAGTTTTCTTTAAGACAGACCAAGGAAAAATTGA AGTAATAGACGGAAGACAAAGATATGAAACATTAAGTAAGTTTTTAGGCAGCAATTTATCTTTAAGTAAAAAAGGGTTGA CTAACTTAAAATCATTGCATAAGAAAAAATATGCTGATTTAGAACCTAAAATACAGGATATATATTTGGATACTAAAATA AGAATAATAGAATTTAGTATAGTTAATGAACCTAAGTTAACTGATAGACAAGAAGATTTAATTAAGAAAGAGATATTTAG ACGATATAATTCGGGAATAACACCACTAACAAGTGTTGATATTAATAGAGCTATGTATAACAATGACAATATCACCAATT TTTTTAAGACCAAAATAAGAGATGATGAAGCATTATACCAAGAATTAATAGGATTGTTTTTTAATTCAAATAGTAATAGA AAAGTATCGGTAGATACTATAATGCATAAAATAAGACAGATTTTAGTTTTACATAAGATTCCAGTTAAGTATTATTCAAG GTCAAGTAATAGACAATTTGTAATAGAAAGTTTTTATGAAATACTTATGAATGAAACTGAAGATCCATCAATAATATATA ATGATTTTATACGAAAAATAGAATTATTAATAAAATTAAAGGGAATATTTTGCAAGTATGAAATTGAGTATAATAAACTT ATATCTGAGTGTTTAATTTGGGCATTATATATATGTGATGTAGAAAATATAGATATTCCTCAATTTGAAGCAGAAGAACC ATTTTATAATGACTTACTAATATATGTTAAACAAGATTTGGATAAATTCTCTAATTTGGAAAGTCATTTTTATAAGAGTT ATGAGCCAAGATATGAATATATATTAAAATTTGTAGAGAATAAATTCAATAAGAATCTAGTGGATACGTATATAACAAGT CATAGAGATGTAGTTAAGAATAGACAAAAGATAGATTCTGATATAAACATAACAAAACAACTAGATGAATTAAAGGAGTT AAGAATAGATAAGGCAGAGCCTTCAAGCACCACAATAGAAGATTTGAGTTCTCAAATGTTAAGAAAAAGATTTCTAGTAA GACCTTCATATCAGAGAGAAGAAGTTATAAATTTAGTTAAATCATCATCTATAATAGAAAGTATTCTTTTGGATATAAAG CTTCCTCCAATATTTATATTTAAAAGAAAGGATGGAGTAAGTGAAGTAATAGATGGACAACAAAGGTTATTAACAATACT AGGATACATGGGAGAAGGATTTTGTGATGAAAGAGGAAATAGTATCTATTCTAAGAAAAATCAATTTAAATTAAAAGATT TAAGAGTATTAGATGAATTAAATGGATTAAGATTTAATTCATTAGATTCTAAATTGCAGGATAAAATATATGATTTTAAC TTGTCAGTAGTAACAATAGATGAAGAAAGAAATCCTAACTTCAATCCAATAGATTTATTTATAAGATTAAATAATAAACC CTATCCTGTAAGAGAAAATACATTTGAAATGTGGAATTCTTATATTGATAAAGAAATAATAACTAAAATAAGAACTAATG TAAAGAAAAACGAAGAGTGGATGTACTTTAGAAAAAATAATAGTAGAATGATAAATGAAGAAATGTATACAATATTATCA TATTTAAGTTATAAGAATAATTATGAAAATATTAAAGAAAAAGATATATTTGATATTTACCAAAAGGGTCAAAGAATTAA TTTCAGGATACAGAATAAAAAGGACTTAACAAGAATTTTAGAATCAGCTTCAAAAGATAATGGCAGTAAGAAGCATTTTT TAGCTAGTATAAGAAATGTTGAATCATTTATTAAAAAATTAAGATTAATTTTGGTAACAGAAAATATAAGTAATGATACT ATTAATGAGTATCTTAAAAATGAGTTGAATCTAATTTTTAAGGTAAAAGCTAATTCTACAAGAAGAAGTTTACAAGATTT CTATGCATTATGGTATATTATACAGCCATTAAATATAGAGATGATAAGAAGAAATAGGGAAGTAATAAAAGAAGAATTAC AAATTATTTTTACTTTTATGAAAGAAATTCCCGAAAATTCATTAAGTGATTTTCTAAATAGAGTTAATGAATTCAATGAA AAATATAAAATAAACCAAAGAAAACTAAAACTTCCGGTGGATAAAGTTGAGGAAATAATTAAAAGGCAAAATTTCATATG TCCAATATGTAAGGAAAAATTGTATATTGGAGATATTACTAATAATGATCATATTGTTGCACTTGCAATAGGTGGAGATG ATGAAATCGAAAATATACAAGTTACTCATGAAAGCTGTAATCATGAAAAAGGATGTAAACAATTAGAATTGATTTAG
Upstream 100 bases:
>100_bases GGATTTCAAAGGTCACACTTCGCCTCTACCATGAAAACCTCGGCAATACAGAAATGTATTGCTGAGTTTTTTGTTTTTTA TCAAATTTATAATTACATAA
Downstream 100 bases:
>100_bases TTAATATACTTTATTATATGATAGTTTCTTTTCTAAAATAAGGGTAAGTTATAGACATACATTATTATATTAAAACAATA CCTATACTAGATAATATATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 878; Mature: 877
Protein sequence:
>878_residues MAKGGKIKIKNYREFERGAVMDEKGFELQSDEIELILKNHLKIESKVMSIETLLGNARMRNKIVYDPYYQRNYVWDNDKA TYFIESILLGTEIPPLVFFKTDQGKIEVIDGRQRYETLSKFLGSNLSLSKKGLTNLKSLHKKKYADLEPKIQDIYLDTKI RIIEFSIVNEPKLTDRQEDLIKKEIFRRYNSGITPLTSVDINRAMYNNDNITNFFKTKIRDDEALYQELIGLFFNSNSNR KVSVDTIMHKIRQILVLHKIPVKYYSRSSNRQFVIESFYEILMNETEDPSIIYNDFIRKIELLIKLKGIFCKYEIEYNKL ISECLIWALYICDVENIDIPQFEAEEPFYNDLLIYVKQDLDKFSNLESHFYKSYEPRYEYILKFVENKFNKNLVDTYITS HRDVVKNRQKIDSDINITKQLDELKELRIDKAEPSSTTIEDLSSQMLRKRFLVRPSYQREEVINLVKSSSIIESILLDIK LPPIFIFKRKDGVSEVIDGQQRLLTILGYMGEGFCDERGNSIYSKKNQFKLKDLRVLDELNGLRFNSLDSKLQDKIYDFN LSVVTIDEERNPNFNPIDLFIRLNNKPYPVRENTFEMWNSYIDKEIITKIRTNVKKNEEWMYFRKNNSRMINEEMYTILS YLSYKNNYENIKEKDIFDIYQKGQRINFRIQNKKDLTRILESASKDNGSKKHFLASIRNVESFIKKLRLILVTENISNDT INEYLKNELNLIFKVKANSTRRSLQDFYALWYIIQPLNIEMIRRNREVIKEELQIIFTFMKEIPENSLSDFLNRVNEFNE KYKINQRKLKLPVDKVEEIIKRQNFICPICKEKLYIGDITNNDHIVALAIGGDDEIENIQVTHESCNHEKGCKQLELI
Sequences:
>Translated_878_residues MAKGGKIKIKNYREFERGAVMDEKGFELQSDEIELILKNHLKIESKVMSIETLLGNARMRNKIVYDPYYQRNYVWDNDKA TYFIESILLGTEIPPLVFFKTDQGKIEVIDGRQRYETLSKFLGSNLSLSKKGLTNLKSLHKKKYADLEPKIQDIYLDTKI RIIEFSIVNEPKLTDRQEDLIKKEIFRRYNSGITPLTSVDINRAMYNNDNITNFFKTKIRDDEALYQELIGLFFNSNSNR KVSVDTIMHKIRQILVLHKIPVKYYSRSSNRQFVIESFYEILMNETEDPSIIYNDFIRKIELLIKLKGIFCKYEIEYNKL ISECLIWALYICDVENIDIPQFEAEEPFYNDLLIYVKQDLDKFSNLESHFYKSYEPRYEYILKFVENKFNKNLVDTYITS HRDVVKNRQKIDSDINITKQLDELKELRIDKAEPSSTTIEDLSSQMLRKRFLVRPSYQREEVINLVKSSSIIESILLDIK LPPIFIFKRKDGVSEVIDGQQRLLTILGYMGEGFCDERGNSIYSKKNQFKLKDLRVLDELNGLRFNSLDSKLQDKIYDFN LSVVTIDEERNPNFNPIDLFIRLNNKPYPVRENTFEMWNSYIDKEIITKIRTNVKKNEEWMYFRKNNSRMINEEMYTILS YLSYKNNYENIKEKDIFDIYQKGQRINFRIQNKKDLTRILESASKDNGSKKHFLASIRNVESFIKKLRLILVTENISNDT INEYLKNELNLIFKVKANSTRRSLQDFYALWYIIQPLNIEMIRRNREVIKEELQIIFTFMKEIPENSLSDFLNRVNEFNE KYKINQRKLKLPVDKVEEIIKRQNFICPICKEKLYIGDITNNDHIVALAIGGDDEIENIQVTHESCNHEKGCKQLELI >Mature_877_residues AKGGKIKIKNYREFERGAVMDEKGFELQSDEIELILKNHLKIESKVMSIETLLGNARMRNKIVYDPYYQRNYVWDNDKAT YFIESILLGTEIPPLVFFKTDQGKIEVIDGRQRYETLSKFLGSNLSLSKKGLTNLKSLHKKKYADLEPKIQDIYLDTKIR IIEFSIVNEPKLTDRQEDLIKKEIFRRYNSGITPLTSVDINRAMYNNDNITNFFKTKIRDDEALYQELIGLFFNSNSNRK VSVDTIMHKIRQILVLHKIPVKYYSRSSNRQFVIESFYEILMNETEDPSIIYNDFIRKIELLIKLKGIFCKYEIEYNKLI SECLIWALYICDVENIDIPQFEAEEPFYNDLLIYVKQDLDKFSNLESHFYKSYEPRYEYILKFVENKFNKNLVDTYITSH RDVVKNRQKIDSDINITKQLDELKELRIDKAEPSSTTIEDLSSQMLRKRFLVRPSYQREEVINLVKSSSIIESILLDIKL PPIFIFKRKDGVSEVIDGQQRLLTILGYMGEGFCDERGNSIYSKKNQFKLKDLRVLDELNGLRFNSLDSKLQDKIYDFNL SVVTIDEERNPNFNPIDLFIRLNNKPYPVRENTFEMWNSYIDKEIITKIRTNVKKNEEWMYFRKNNSRMINEEMYTILSY LSYKNNYENIKEKDIFDIYQKGQRINFRIQNKKDLTRILESASKDNGSKKHFLASIRNVESFIKKLRLILVTENISNDTI NEYLKNELNLIFKVKANSTRRSLQDFYALWYIIQPLNIEMIRRNREVIKEELQIIFTFMKEIPENSLSDFLNRVNEFNEK YKINQRKLKLPVDKVEEIIKRQNFICPICKEKLYIGDITNNDHIVALAIGGDDEIENIQVTHESCNHEKGCKQLELI
Specific function: Unknown
COG id: COG1479
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 104277; Mature: 104146
Theoretical pI: Translated: 8.52; Mature: 8.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKGGKIKIKNYREFERGAVMDEKGFELQSDEIELILKNHLKIESKVMSIETLLGNARMR CCCCCCEEECCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHC NKIVYDPYYQRNYVWDNDKATYFIESILLGTEIPPLVFFKTDQGKIEVIDGRQRYETLSK CCEEECCCCCCCEEECCCCHHHHHHHHHHCCCCCCEEEEECCCCCEEEECCHHHHHHHHH FLGSNLSLSKKGLTNLKSLHKKKYADLEPKIQDIYLDTKIRIIEFSIVNEPKLTDRQEDL HHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHEEEECCEEEEEEEEECCCCCCCCHHHHH IKKEIFRRYNSGITPLTSVDINRAMYNNDNITNFFKTKIRDDEALYQELIGLFFNSNSNR HHHHHHHHHCCCCCCEEECCCHHHEECCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCC KVSVDTIMHKIRQILVLHKIPVKYYSRSSNRQFVIESFYEILMNETEDPSIIYNDFIRKI EEEHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHH ELLIKLKGIFCKYEIEYNKLISECLIWALYICDVENIDIPQFEAEEPFYNDLLIYVKQDL HHHHHHCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH DKFSNLESHFYKSYEPRYEYILKFVENKFNKNLVDTYITSHRDVVKNRQKIDSDINITKQ HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHH LDELKELRIDKAEPSSTTIEDLSSQMLRKRFLVRPSYQREEVINLVKSSSIIESILLDIK HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC LPPIFIFKRKDGVSEVIDGQQRLLTILGYMGEGFCDERGNSIYSKKNQFKLKDLRVLDEL CCCEEEEECCCCHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH NGLRFNSLDSKLQDKIYDFNLSVVTIDEERNPNFNPIDLFIRLNNKPYPVRENTFEMWNS CCCEECCHHHHHHHHHEEECEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHH YIDKEIITKIRTNVKKNEEWMYFRKNNSRMINEEMYTILSYLSYKNNYENIKEKDIFDIY HHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH QKGQRINFRIQNKKDLTRILESASKDNGSKKHFLASIRNVESFIKKLRLILVTENISNDT HCCCEEEEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCHH INEYLKNELNLIFKVKANSTRRSLQDFYALWYIIQPLNIEMIRRNREVIKEELQIIFTFM HHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH KEIPENSLSDFLNRVNEFNEKYKINQRKLKLPVDKVEEIIKRQNFICPICKEKLYIGDIT HHCCCHHHHHHHHHHHHHHHHHCCCCHHEECCHHHHHHHHHHCCCCCCHHCCCEEEEEEC NNDHIVALAIGGDDEIENIQVTHESCNHEKGCKQLELI CCCEEEEEEECCCCCCCCEEEEHHHCCCHHCCHHCCCC >Mature Secondary Structure AKGGKIKIKNYREFERGAVMDEKGFELQSDEIELILKNHLKIESKVMSIETLLGNARMR CCCCCEEECCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHC NKIVYDPYYQRNYVWDNDKATYFIESILLGTEIPPLVFFKTDQGKIEVIDGRQRYETLSK CCEEECCCCCCCEEECCCCHHHHHHHHHHCCCCCCEEEEECCCCCEEEECCHHHHHHHHH FLGSNLSLSKKGLTNLKSLHKKKYADLEPKIQDIYLDTKIRIIEFSIVNEPKLTDRQEDL HHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHEEEECCEEEEEEEEECCCCCCCCHHHHH IKKEIFRRYNSGITPLTSVDINRAMYNNDNITNFFKTKIRDDEALYQELIGLFFNSNSNR HHHHHHHHHCCCCCCEEECCCHHHEECCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCC KVSVDTIMHKIRQILVLHKIPVKYYSRSSNRQFVIESFYEILMNETEDPSIIYNDFIRKI EEEHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHH ELLIKLKGIFCKYEIEYNKLISECLIWALYICDVENIDIPQFEAEEPFYNDLLIYVKQDL HHHHHHCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH DKFSNLESHFYKSYEPRYEYILKFVENKFNKNLVDTYITSHRDVVKNRQKIDSDINITKQ HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHH LDELKELRIDKAEPSSTTIEDLSSQMLRKRFLVRPSYQREEVINLVKSSSIIESILLDIK HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC LPPIFIFKRKDGVSEVIDGQQRLLTILGYMGEGFCDERGNSIYSKKNQFKLKDLRVLDEL CCCEEEEECCCCHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH NGLRFNSLDSKLQDKIYDFNLSVVTIDEERNPNFNPIDLFIRLNNKPYPVRENTFEMWNS CCCEECCHHHHHHHHHEEECEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHH YIDKEIITKIRTNVKKNEEWMYFRKNNSRMINEEMYTILSYLSYKNNYENIKEKDIFDIY HHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH QKGQRINFRIQNKKDLTRILESASKDNGSKKHFLASIRNVESFIKKLRLILVTENISNDT HCCCEEEEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCHH INEYLKNELNLIFKVKANSTRRSLQDFYALWYIIQPLNIEMIRRNREVIKEELQIIFTFM HHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH KEIPENSLSDFLNRVNEFNEKYKINQRKLKLPVDKVEEIIKRQNFICPICKEKLYIGDIT HHCCCHHHHHHHHHHHHHHHHHCCCCHHEECCHHHHHHHHHHCCCCCCHHCCCEEEEEEC NNDHIVALAIGGDDEIENIQVTHESCNHEKGCKQLELI CCCEEEEEEECCCCCCCCEEEEHHHCCCHHCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA