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The map label for this gene is ocd2 [H]

Identifier: 170755867

GI number: 170755867

Start: 2745422

End: 2746411

Strand: Reverse

Name: ocd2 [H]

Synonym: CLD_1990

Alternate gene names: 170755867

Gene position: 2746411-2745422 (Counterclockwise)

Preceding gene: 170757083

Following gene: 170755800

Centisome position: 69.38

GC content: 31.41

Gene sequence:

>990_bases
ATGCTTATTTTAACAGCAGAAGATATTAAAAAAGTGTTTACTATGAGAGATGCTATAGAAGCAGATAAAGAAGCTTTTAG
GCTTTATTCAACTAATAAAGCTGAAGTTCCATTAAGAACAAATATAAATATACCTAAATATAATGGGACAAGTCTTTTTA
TGCCAGGTTATGTTGAAGAATTAGATACAGCAGGAATCAAGATAGTATCTGTATTTCCCGAAAATGTCAAACTAGGAAAA
CCAGCAGTACCAGCTAAAATGATACTGTTAGACGGAAAAACAGGAGAAGTTTCAGCTATAATGGATGGAACTTATTTAAC
TCAACTTAGAACAGGTGCCTCTGCCGGAGCAGCTACAGATATTTTAGCAAAAGAAGATGCTAAAATAGGAGCTTTAATAG
GTACGGGTGGTCAAGCTTTATGTCAGTTAGAAGCCTTATTAGCAGCTAGAAGTTTAGAAATAGTAAAGGTTTATAGTAGA
AACTTTCAAAAGGTAAAAGCTTTTGTAGAAGAAGCTAAGAAAAATTTAAGTAAGTATGGTACAGAAATAATAGGAGTAAA
CAGTTCAGATGAAGCTATTGAAAATGCAGATGTTATAACAGTAGTAACTACAGCTACTTCACCAGTTTTTGACGGTAGAA
AGGTAAAAGAAGGAGCTCATATAAATGGCGTAGGATCTTATATGAAACATATGCAAGAAATTGATGAATATATTATATCT
AGGGCAGATAAAATATATTTAGATTCAAAAGAAGCTGTTTTAAGTGAAGCTGGAGATTTTATAATACCCCTACAAAAAGG
AATTATAAAAGAAGATAAAATTACAGGAGAATTAGGACAAGTTATTTCAAAGGCTATAGATGGAAGAACAACCGAAAACG
AAATAACTTTATTTAAATCTGTAGGTATTGCAGTACAGGATGTTGTAACTGCATATAAAATATATGAAAAAGCCCTAGAA
AATAAAGTAGGTAAAGAAATAGAAATATAA

Upstream 100 bases:

>100_bases
TAATATGATATAGTAAAAAATCAATATTCCTATTTAATAATACTCCATAATGTAATATTATATATATAAGAGTTTAATAT
TATATTATGGAGGTATTTTT

Downstream 100 bases:

>100_bases
GCAGCGAACCCAAATCTACAATTTGGCGTGAGTGGCTTACTCCTATGTAATAGGAGGTTTTCATATTAATTTAGTGTAAA
TTAAAAAGCAGGAATTGAAA

Product: ornithine cyclodeaminase

Products: NA

Alternate protein names: OCD 2 [H]

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MLILTAEDIKKVFTMRDAIEADKEAFRLYSTNKAEVPLRTNINIPKYNGTSLFMPGYVEELDTAGIKIVSVFPENVKLGK
PAVPAKMILLDGKTGEVSAIMDGTYLTQLRTGASAGAATDILAKEDAKIGALIGTGGQALCQLEALLAARSLEIVKVYSR
NFQKVKAFVEEAKKNLSKYGTEIIGVNSSDEAIENADVITVVTTATSPVFDGRKVKEGAHINGVGSYMKHMQEIDEYIIS
RADKIYLDSKEAVLSEAGDFIIPLQKGIIKEDKITGELGQVISKAIDGRTTENEITLFKSVGIAVQDVVTAYKIYEKALE
NKVGKEIEI

Sequences:

>Translated_329_residues
MLILTAEDIKKVFTMRDAIEADKEAFRLYSTNKAEVPLRTNINIPKYNGTSLFMPGYVEELDTAGIKIVSVFPENVKLGK
PAVPAKMILLDGKTGEVSAIMDGTYLTQLRTGASAGAATDILAKEDAKIGALIGTGGQALCQLEALLAARSLEIVKVYSR
NFQKVKAFVEEAKKNLSKYGTEIIGVNSSDEAIENADVITVVTTATSPVFDGRKVKEGAHINGVGSYMKHMQEIDEYIIS
RADKIYLDSKEAVLSEAGDFIIPLQKGIIKEDKITGELGQVISKAIDGRTTENEITLFKSVGIAVQDVVTAYKIYEKALE
NKVGKEIEI
>Mature_329_residues
MLILTAEDIKKVFTMRDAIEADKEAFRLYSTNKAEVPLRTNINIPKYNGTSLFMPGYVEELDTAGIKIVSVFPENVKLGK
PAVPAKMILLDGKTGEVSAIMDGTYLTQLRTGASAGAATDILAKEDAKIGALIGTGGQALCQLEALLAARSLEIVKVYSR
NFQKVKAFVEEAKKNLSKYGTEIIGVNSSDEAIENADVITVVTTATSPVFDGRKVKEGAHINGVGSYMKHMQEIDEYIIS
RADKIYLDSKEAVLSEAGDFIIPLQKGIIKEDKITGELGQVISKAIDGRTTENEITLFKSVGIAVQDVVTAYKIYEKALE
NKVGKEIEI

Specific function: Unknown

COG id: COG2423

COG function: function code E; Predicted ornithine cyclodeaminase, mu-crystallin homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ornithine cyclodeaminase family [H]

Homologues:

Organism=Homo sapiens, GI4503065, Length=291, Percent_Identity=31.9587628865979, Blast_Score=132, Evalue=5e-31,
Organism=Homo sapiens, GI62241008, Length=291, Percent_Identity=31.9587628865979, Blast_Score=132, Evalue=6e-31,
Organism=Drosophila melanogaster, GI24642678, Length=316, Percent_Identity=29.746835443038, Blast_Score=105, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR003462 [H]

Pfam domain/function: PF02423 OCD_Mu_crystall [H]

EC number: =4.3.1.12 [H]

Molecular weight: Translated: 35716; Mature: 35716

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLILTAEDIKKVFTMRDAIEADKEAFRLYSTNKAEVPLRTNINIPKYNGTSLFMPGYVEE
CEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCEEECCCHHHH
LDTAGIKIVSVFPENVKLGKPAVPAKMILLDGKTGEVSAIMDGTYLTQLRTGASAGAATD
HCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCCEEEEECCHHHHHHHCCCCCCCHHH
ILAKEDAKIGALIGTGGQALCQLEALLAARSLEIVKVYSRNFQKVKAFVEEAKKNLSKYG
HHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TEIIGVNSSDEAIENADVITVVTTATSPVFDGRKVKEGAHINGVGSYMKHMQEIDEYIIS
CEEEECCCCCHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC
RADKIYLDSKEAVLSEAGDFIIPLQKGIIKEDKITGELGQVISKAIDGRTTENEITLFKS
CCCEEEECCHHHHHHCCCCEEEEHHHCCCCHHHCCHHHHHHHHHHHCCCCCCCCEEEHHH
VGIAVQDVVTAYKIYEKALENKVGKEIEI
HCHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLILTAEDIKKVFTMRDAIEADKEAFRLYSTNKAEVPLRTNINIPKYNGTSLFMPGYVEE
CEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCEEECCCHHHH
LDTAGIKIVSVFPENVKLGKPAVPAKMILLDGKTGEVSAIMDGTYLTQLRTGASAGAATD
HCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCCEEEEECCHHHHHHHCCCCCCCHHH
ILAKEDAKIGALIGTGGQALCQLEALLAARSLEIVKVYSRNFQKVKAFVEEAKKNLSKYG
HHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TEIIGVNSSDEAIENADVITVVTTATSPVFDGRKVKEGAHINGVGSYMKHMQEIDEYIIS
CEEEECCCCCHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC
RADKIYLDSKEAVLSEAGDFIIPLQKGIIKEDKITGELGQVISKAIDGRTTENEITLFKS
CCCEEEECCHHHHHHCCCCEEEEHHHCCCCHHHCCHHHHHHHHHHHCCCCCCCCEEEHHH
VGIAVQDVVTAYKIYEKALENKVGKEIEI
HCHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481432 [H]