| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is sseA [H]
Identifier: 170755856
GI number: 170755856
Start: 913498
End: 914337
Strand: Direct
Name: sseA [H]
Synonym: CLD_3768
Alternate gene names: 170755856
Gene position: 913498-914337 (Clockwise)
Preceding gene: 170755041
Following gene: 170755814
Centisome position: 23.08
GC content: 29.76
Gene sequence:
>840_bases GTGAAGAATTTTGTATCTACTAAGTGGTTACAGAATCATTTAGAAGATGAAAATATAGTCATTGTAGATTGTAGAGGAGA TCTTTTAAAGGATAGTTATGGAGAGGAAGTTTATAAAAAGGGACATATAAAAAATGCTGTCTTTGCAGATTTAAAAAAAG TTATGTCCTCTGAAGAAAAGGAACACGGAGGTAGGAATCCATTACCAGACACAGAAGACTTTAAAAGAAGTATAGAAAAA CTAGGAATAAACAAAAATACTTTAGTTGTAGCCTATGATGAATTAAAAATAGCTGGAGCAGCTAGATTTTGTTGGATGTT AAGATATGTAGGACACACTAATAACTATGTTCTAGATGGGGGAATAAATAAGTGGATTACAGAAAATAGAAAGCTATATA TAGAAGAAAACAGAAGTAAAGAAAAATTGGATATTACAAATGGAGAATTTAGCATTTCTTTAAATGAAGAAATAAAAGCA GATGTAAATTACATAAAAGATAATATGAAAAAAGATCTCATATTAGTAGATTCAAGAACTAACATAAGATATGAAGGAAT AGAAGAGCCTATAGACAAAAAGGCTGGACATATACCTGGAGCTAAAAGTATTTATTGGAAAGATATGTTTAGGGAAGATG GAGCTGTTGATGAAGATAAAGTGAGAGAAAATTTTCTACCATTAAAAGATTATACTAATATAGCAGTTTATTGTGGATCA GGAATAGATGCAACTTTTAATTTTTTACTTTTAGATGAAGTAGGAATTAAAGCTAGAGTATATGCAGGAAGTTGGAGTGA TTGGATAACCTATGAGGAGAATCCTATAAATGCTAAATAA
Upstream 100 bases:
>100_bases AACAAAATGAATGGTTTATGAATATATTTTTTCTATTTGCGGAATTAAAATTAAATCAGTTTTGAGATATTCTTTTTAAA AATATTTAGGAGATGATTTT
Downstream 100 bases:
>100_bases ATATTTATAAACATAAAAAAGTTTGACAATTTAATTCAATGGAGGAAACAAAATGTTAATACAAACTGAACGCTTGGAAC TTATCCCTTTAACTCTTAAT
Product: sulfurtransferase family protein
Products: NA
Alternate protein names: MST; Rhodanese-like protein [H]
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MKNFVSTKWLQNHLEDENIVIVDCRGDLLKDSYGEEVYKKGHIKNAVFADLKKVMSSEEKEHGGRNPLPDTEDFKRSIEK LGINKNTLVVAYDELKIAGAARFCWMLRYVGHTNNYVLDGGINKWITENRKLYIEENRSKEKLDITNGEFSISLNEEIKA DVNYIKDNMKKDLILVDSRTNIRYEGIEEPIDKKAGHIPGAKSIYWKDMFREDGAVDEDKVRENFLPLKDYTNIAVYCGS GIDATFNFLLLDEVGIKARVYAGSWSDWITYEENPINAK
Sequences:
>Translated_279_residues MKNFVSTKWLQNHLEDENIVIVDCRGDLLKDSYGEEVYKKGHIKNAVFADLKKVMSSEEKEHGGRNPLPDTEDFKRSIEK LGINKNTLVVAYDELKIAGAARFCWMLRYVGHTNNYVLDGGINKWITENRKLYIEENRSKEKLDITNGEFSISLNEEIKA DVNYIKDNMKKDLILVDSRTNIRYEGIEEPIDKKAGHIPGAKSIYWKDMFREDGAVDEDKVRENFLPLKDYTNIAVYCGS GIDATFNFLLLDEVGIKARVYAGSWSDWITYEENPINAK >Mature_279_residues MKNFVSTKWLQNHLEDENIVIVDCRGDLLKDSYGEEVYKKGHIKNAVFADLKKVMSSEEKEHGGRNPLPDTEDFKRSIEK LGINKNTLVVAYDELKIAGAARFCWMLRYVGHTNNYVLDGGINKWITENRKLYIEENRSKEKLDITNGEFSISLNEEIKA DVNYIKDNMKKDLILVDSRTNIRYEGIEEPIDKKAGHIPGAKSIYWKDMFREDGAVDEDKVRENFLPLKDYTNIAVYCGS GIDATFNFLLLDEVGIKARVYAGSWSDWITYEENPINAK
Specific function: Transfers a sulfur ion to cyanide or to other thiol compounds [H]
COG id: COG2897
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 rhodanese domains [H]
Homologues:
Organism=Homo sapiens, GI194473668, Length=283, Percent_Identity=28.2685512367491, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI61835204, Length=283, Percent_Identity=28.2685512367491, Blast_Score=89, Evalue=3e-18, Organism=Homo sapiens, GI194473681, Length=283, Percent_Identity=28.2685512367491, Blast_Score=89, Evalue=3e-18, Organism=Homo sapiens, GI17402865, Length=282, Percent_Identity=27.3049645390071, Blast_Score=86, Evalue=2e-17, Organism=Escherichia coli, GI87082121, Length=287, Percent_Identity=29.2682926829268, Blast_Score=117, Evalue=9e-28,
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001763 [H]
Pfam domain/function: PF00581 Rhodanese [H]
EC number: =2.8.1.2 [H]
Molecular weight: Translated: 32120; Mature: 32120
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNFVSTKWLQNHLEDENIVIVDCRGDLLKDSYGEEVYKKGHIKNAVFADLKKVMSSEEK CCCCHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHH EHGGRNPLPDTEDFKRSIEKLGINKNTLVVAYDELKIAGAARFCWMLRYVGHTNNYVLDG HCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCEEEHHHHHHHHHHHHHCCCCCEEEEC GINKWITENRKLYIEENRSKEKLDITNGEFSISLNEEIKADVNYIKDNMKKDLILVDSRT CCHHHHCCCCEEEEECCCCCCEEEECCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCC NIRYEGIEEPIDKKAGHIPGAKSIYWKDMFREDGAVDEDKVRENFLPLKDYTNIAVYCGS CCEECCCCCCHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCEEEEECC GIDATFNFLLLDEVGIKARVYAGSWSDWITYEENPINAK CCCCEEEEEEEECCCCEEEEEECCCCCCEEECCCCCCCC >Mature Secondary Structure MKNFVSTKWLQNHLEDENIVIVDCRGDLLKDSYGEEVYKKGHIKNAVFADLKKVMSSEEK CCCCHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHH EHGGRNPLPDTEDFKRSIEKLGINKNTLVVAYDELKIAGAARFCWMLRYVGHTNNYVLDG HCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCEEEHHHHHHHHHHHHHCCCCCEEEEC GINKWITENRKLYIEENRSKEKLDITNGEFSISLNEEIKADVNYIKDNMKKDLILVDSRT CCHHHHCCCCEEEEECCCCCCEEEECCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCC NIRYEGIEEPIDKKAGHIPGAKSIYWKDMFREDGAVDEDKVRENFLPLKDYTNIAVYCGS CCEECCCCCCHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCEEEEECC GIDATFNFLLLDEVGIKARVYAGSWSDWITYEENPINAK CCCCEEEEEEEECCCCEEEEEECCCCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]