| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
Click here to switch to the map view.
The map label for this gene is 170755821
Identifier: 170755821
GI number: 170755821
Start: 1376970
End: 1377203
Strand: Direct
Name: 170755821
Synonym: CLD_3321
Alternate gene names: NA
Gene position: 1376970-1377203 (Clockwise)
Preceding gene: 170756183
Following gene: 170757541
Centisome position: 34.79
GC content: 35.04
Gene sequence:
>234_bases ATGATAGAAAAAATCAATGCAAACTGTAAAAAATTAAATGATTTATTTGGAGTGAACGTTAAATTGCCTAACCCAAGTAA ACGCATTTTGCGAGCCAGTGCAGTTGTTAACTGCACAATGGGTGTAGGATTGATTTTATTTGGAGCTTTATCATCACAAA AATGGACAGCCGCTTTAGGAGGACTAAGCATTGTGGGAAGCGTTATATCTAGTGAAGAAGCTAAAAAGAAATAA
Upstream 100 bases:
>100_bases AAAAAGGTACAGCCGTATGGATATGTATCACTATTGGGATAGTGATAATTGTAAATCATGGAATACAATTATTATTTGCA ATTTTTTAGGAGGAAAGATT
Downstream 100 bases:
>100_bases ATGAGAAAGGGTATATCACCTTTAAAACTGTCTTGCGGTTATAAAAAGCTTTAATGATGGCAGATAGTTTTCTTGGATTA AAATTTCAAAGACAATAGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 77; Mature: 77
Protein sequence:
>77_residues MIEKINANCKKLNDLFGVNVKLPNPSKRILRASAVVNCTMGVGLILFGALSSQKWTAALGGLSIVGSVISSEEAKKK
Sequences:
>Translated_77_residues MIEKINANCKKLNDLFGVNVKLPNPSKRILRASAVVNCTMGVGLILFGALSSQKWTAALGGLSIVGSVISSEEAKKK >Mature_77_residues MIEKINANCKKLNDLFGVNVKLPNPSKRILRASAVVNCTMGVGLILFGALSSQKWTAALGGLSIVGSVISSEEAKKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8130; Mature: 8130
Theoretical pI: Translated: 10.70; Mature: 10.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEKINANCKKLNDLFGVNVKLPNPSKRILRASAVVNCTMGVGLILFGALSSQKWTAALG CCCCCCCCHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHC GLSIVGSVISSEEAKKK CHHHHHHHHCCCCCCCC >Mature Secondary Structure MIEKINANCKKLNDLFGVNVKLPNPSKRILRASAVVNCTMGVGLILFGALSSQKWTAALG CCCCCCCCHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHC GLSIVGSVISSEEAKKK CHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA