| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755808
Identifier: 170755808
GI number: 170755808
Start: 2357105
End: 2357527
Strand: Reverse
Name: 170755808
Synonym: CLD_2406
Alternate gene names: NA
Gene position: 2357527-2357105 (Counterclockwise)
Preceding gene: 170757326
Following gene: 170755726
Centisome position: 59.56
GC content: 26.0
Gene sequence:
>423_bases ATGGAGAACTTAACCAAACTAGAAGTTTTATCTAAGATAGAAAATAGTGGTTATAAATTTGCATGGATAAACACTTTTAG TGACTTAAAATTAATAGAATTGAGAGAAAACAATAAGTTTAAGGATAGTTACTTAGAAAATTTGATAGAAGCAAAGATTT TTAACGAAAATAAAGAACTTTCAATTATTCCTTATGAAGATGATGAAAAATTTTCTGTAGTTGAATTTGATGGAACAGAT AAAGATTATATAGAAGAAAAACAAGTTCTATATAAAAATAAATCTCCTTTAAAGGGTGAAAATGATAAATTAGTTATAAG AAATTATTTGGACTATGATAATGAAGGACAAGCATTTGTAGATTACACTAAGCTTTGTGGTATAGAAGGGGGAAAAGGCA ATGAGAAACAACAGTCAAAATAA
Upstream 100 bases:
>100_bases ATTTTCAATCTGAAAGTAATATGGATAAATTTCAACTGAAGGGTGATATAGATAAGTTTAATGAAATAATAAGTATTCTA TAAAGATAGAAGGTGATAAG
Downstream 100 bases:
>100_bases AGAAAGATATGCTAAAGCTCCATATAATTTTATACCTTTTCCTGAAAAAATATTTTACAGACACACAATTTTACCAAAAT ATGAAGAAAAAGAAGGTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MENLTKLEVLSKIENSGYKFAWINTFSDLKLIELRENNKFKDSYLENLIEAKIFNENKELSIIPYEDDEKFSVVEFDGTD KDYIEEKQVLYKNKSPLKGENDKLVIRNYLDYDNEGQAFVDYTKLCGIEGGKGNEKQQSK
Sequences:
>Translated_140_residues MENLTKLEVLSKIENSGYKFAWINTFSDLKLIELRENNKFKDSYLENLIEAKIFNENKELSIIPYEDDEKFSVVEFDGTD KDYIEEKQVLYKNKSPLKGENDKLVIRNYLDYDNEGQAFVDYTKLCGIEGGKGNEKQQSK >Mature_140_residues MENLTKLEVLSKIENSGYKFAWINTFSDLKLIELRENNKFKDSYLENLIEAKIFNENKELSIIPYEDDEKFSVVEFDGTD KDYIEEKQVLYKNKSPLKGENDKLVIRNYLDYDNEGQAFVDYTKLCGIEGGKGNEKQQSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16383; Mature: 16383
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENLTKLEVLSKIENSGYKFAWINTFSDLKLIELRENNKFKDSYLENLIEAKIFNENKEL CCCHHHHHHHHHHHCCCEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCE SIIPYEDDEKFSVVEFDGTDKDYIEEKQVLYKNKSPLKGENDKLVIRNYLDYDNEGQAFV EEEECCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCEEE DYTKLCGIEGGKGNEKQQSK EHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MENLTKLEVLSKIENSGYKFAWINTFSDLKLIELRENNKFKDSYLENLIEAKIFNENKEL CCCHHHHHHHHHHHCCCEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCE SIIPYEDDEKFSVVEFDGTDKDYIEEKQVLYKNKSPLKGENDKLVIRNYLDYDNEGQAFV EEEECCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCEEE DYTKLCGIEGGKGNEKQQSK EHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA